Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-959P-201ENST00000384671 107 ntBASIC0.32□□□□□ -2.36
USP38Q8NB14 Y_RNA.649-201ENST00000459077 103 ntBASIC0.32□□□□□ -2.36
USP38Q8NB14 AC007012.1-201ENST00000567192 175 ntBASIC0.32□□□□□ -2.36
USP38Q8NB14 Y_RNA.35-201ENST00000362601 101 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 RNU6-170P-201ENST00000362832 104 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 Y_RNA.261-201ENST00000364631 102 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD114-15-201ENST00000364687 72 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD116-14-201ENST00000383894 92 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD116-17-201ENST00000383929 92 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 RNU6-571P-201ENST00000384128 107 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD116-15-201ENST00000384445 92 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SNORD116-19-201ENST00000384729 92 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 MIR516A2-201ENST00000384888 90 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 MIR516A1-201ENST00000385033 90 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 SPINT5P-201ENST00000448174 155 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 MIR4752-201ENST00000579672 72 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 MIR6755-201ENST00000619993 66 ntBASIC0.31□□□□□ -2.36
USP38Q8NB14 RNU6-1327P-201ENST00000365302 105 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 Y_RNA.342-201ENST00000365352 113 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 AC097635.1-201ENST00000450678 155 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RPL39P34-201ENST00000477141 156 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU6-863P-201ENST00000515989 104 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 Y_RNA.809-201ENST00000516058 95 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU7-129P-201ENST00000516128 62 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU6-1333P-201ENST00000516162 93 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU6-1018P-201ENST00000516577 106 ntBASIC0.3□□□□□ -2.36
USP38Q8NB14 RNU6-815P-201ENST00000384080 113 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 RNU6-1201P-201ENST00000384227 107 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 MIR519A1-201ENST00000385257 85 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 AC108740.1-201ENST00000498629 225 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 IGLVI-20-201ENST00000519296 130 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 MIR4679-2-201ENST00000578358 77 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.29□□□□□ -2.36
USP38Q8NB14 SNORD38.1-201ENST00000363863 68 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 Y_RNA.185-201ENST00000363894 100 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNA5SP368-201ENST00000364298 116 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 Y_RNA.353-201ENST00000365440 108 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNU6-81P-201ENST00000365608 104 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNU6-1126P-201ENST00000384002 107 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 MIR548G-201ENST00000408442 89 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 MIR4493-201ENST00000584016 73 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNU6-90P-201ENST00000606352 106 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 RNU1-29P-201ENST00000606574 126 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 AL365222.1-201ENST00000614661 98 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 AL442128.1-201ENST00000615151 90 ntBASIC0.28□□□□□ -2.36
USP38Q8NB14 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.27□□□□□ -2.37
USP38Q8NB14 RNU6-524P-201ENST00000384270 107 ntBASIC0.27□□□□□ -2.37
USP38Q8NB14 MIR577-201ENST00000385196 96 ntBASIC0.27□□□□□ -2.37
USP38Q8NB14 MIR548A3-201ENST00000385297 97 ntBASIC0.27□□□□□ -2.37
USP38Q8NB14 U6.95-201ENST00000636931 70 ntBASIC0.27□□□□□ -2.37
USP38Q8NB14 RNU6-1260P-201ENST00000362944 107 ntBASIC0.26□□□□□ -2.37
USP38Q8NB14 RNU6-1232P-201ENST00000516299 86 ntBASIC0.26□□□□□ -2.37
USP38Q8NB14 AC068339.1-201ENST00000526965 141 ntBASIC0.26□□□□□ -2.37
USP38Q8NB14 MIR3613-201ENST00000579844 87 ntBASIC0.26□□□□□ -2.37
USP38Q8NB14 Y_RNA.173-201ENST00000363776 113 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 Y_RNA.309-201ENST00000365046 111 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 SNORD41.1-201ENST00000391000 69 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 TMSB4XP3-201ENST00000445144 114 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 AL670379.3-201ENST00000605040 251 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 AL162376.1-201ENST00000624117 175 ntBASIC0.25□□□□□ -2.37
USP38Q8NB14 RNA5SP98-201ENST00000363158 137 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 U8.6-201ENST00000364939 135 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 MIR760-201ENST00000390220 80 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 RNU6-269P-201ENST00000391077 97 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 AL161932.1-201ENST00000437408 146 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
USP38Q8NB14 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.24□□□□□ -2.37
USP38Q8NB14 SNORA9.1-201ENST00000362412 131 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 SNORD36A-201ENST00000362874 73 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 SNORD95.1-201ENST00000364099 68 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 RNU6-1163P-201ENST00000364516 107 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 Y_RNA.323-201ENST00000365157 109 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 Y_RNA.563-201ENST00000384707 108 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.23□□□□□ -2.37
USP38Q8NB14 AC069113.3-201ENST00000521019 150 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 MIR3910-1-201ENST00000580936 111 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 MIR3920-201ENST00000581751 86 ntBASIC0.23□□□□□ -2.37
USP38Q8NB14 Y_RNA.57-201ENST00000362806 113 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 RNU6-832P-201ENST00000363319 107 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 RNU6-1254P-201ENST00000391266 104 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 RNU7-13P-201ENST00000516413 62 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 MIR5009-201ENST00000578736 100 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 AP001180.6-201ENST00000584918 159 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 AC108676.2-201ENST00000605225 163 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 SNORA70.25-201ENST00000612741 95 ntBASIC0.22□□□□□ -2.37
USP38Q8NB14 Y_RNA.377-201ENST00000365644 108 ntBASIC0.21□□□□□ -2.38
USP38Q8NB14 AC104692.1-201ENST00000472406 90 ntBASIC0.21□□□□□ -2.38
USP38Q8NB14 MIR4694-201ENST00000578534 80 ntBASIC0.21□□□□□ -2.38
USP38Q8NB14 RNU6-243P-201ENST00000391140 107 ntBASIC0.2□□□□□ -2.38
USP38Q8NB14 AC008267.6-201ENST00000441664 139 ntBASIC0.2□□□□□ -2.38
USP38Q8NB14 AC109327.2-201ENST00000448339 378 ntBASIC0.2□□□□□ -2.38
USP38Q8NB14 RNU6-1265P-201ENST00000516342 103 ntBASIC0.2□□□□□ -2.38
USP38Q8NB14 Y_RNA.281-201ENST00000364774 94 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 SNORD116-21-201ENST00000384507 92 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR604-201ENST00000384880 94 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR1295A-201ENST00000408463 79 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 RNA5SP266-201ENST00000410273 108 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR548AG2-201ENST00000581228 64 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR499B-201ENST00000636498 73 ntBASIC0.19□□□□□ -2.38
USP38Q8NB14 MIR4315-1-201ENST00000636800 73 ntBASIC0.19□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 273.1 ms