Protein–RNA interactions for Protein: Q8N6N2

TTC9B, Tetratricopeptide repeat protein 9B, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9BQ8N6N2 AL133373.1-201ENST00000497098 94 ntBASIC1.52□□□□□ -2.17
TTC9BQ8N6N2 YWHAEP2-201ENST00000580066 112 ntBASIC1.52□□□□□ -2.17
TTC9BQ8N6N2 YWHAEP3-201ENST00000582767 121 ntBASIC1.52□□□□□ -2.17
TTC9BQ8N6N2 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 SNORD101-201ENST00000384027 73 ntBASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 RNU6-154P-201ENST00000384306 106 ntBASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 MIR320A-201ENST00000385302 82 ntBASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 MIR18B-201ENST00000454574 71 ntBASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 MIR6082-201ENST00000613604 109 ntBASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
TTC9BQ8N6N2 Y_RNA.386-201ENST00000383913 105 ntBASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 MIR4771-2-201ENST00000577758 74 ntBASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 MIR548H5-201ENST00000580314 60 ntBASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 MIR4696-201ENST00000581431 70 ntBASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 MIR4771-1-201ENST00000582617 74 ntBASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
TTC9BQ8N6N2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.49□□□□□ -2.17
TTC9BQ8N6N2 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.49□□□□□ -2.17
TTC9BQ8N6N2 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.49□□□□□ -2.17
TTC9BQ8N6N2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.49□□□□□ -2.17
TTC9BQ8N6N2 RNU6-664P-201ENST00000362381 107 ntBASIC1.48□□□□□ -2.17
TTC9BQ8N6N2 RNU6-580P-201ENST00000365159 107 ntBASIC1.48□□□□□ -2.17
TTC9BQ8N6N2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.48□□□□□ -2.17
TTC9BQ8N6N2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
TTC9BQ8N6N2 RNU6-663P-201ENST00000391105 106 ntBASIC1.48□□□□□ -2.17
TTC9BQ8N6N2 MIR2113-201ENST00000459007 91 ntBASIC1.48□□□□□ -2.17
TTC9BQ8N6N2 MIR3937-201ENST00000580135 106 ntBASIC1.48□□□□□ -2.17
TTC9BQ8N6N2 U6.111-201ENST00000636093 83 ntBASIC1.48□□□□□ -2.17
TTC9BQ8N6N2 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 Y_RNA.36-201ENST00000362602 112 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 Y_RNA.42-201ENST00000362660 108 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 RNU6-1260P-201ENST00000362944 107 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 RNU6-340P-201ENST00000364005 107 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 RNU6-934P-201ENST00000365154 107 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 RNU6-800P-201ENST00000384473 103 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 RNU6-291P-201ENST00000384720 107 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 RNU6-997P-201ENST00000384725 107 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 MIR599-201ENST00000385069 95 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 RPS27P16-201ENST00000425758 201 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 RNU6-165P-201ENST00000517170 99 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 AC023827.1-201ENST00000569247 97 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 AL157834.3-201ENST00000615543 103 ntBASIC1.47□□□□□ -2.17
TTC9BQ8N6N2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 RNA5SP245-201ENST00000364239 121 ntBASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 Y_RNA.224-201ENST00000364308 111 ntBASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 SNORD45A-201ENST00000384512 84 ntBASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 MIR451A-201ENST00000385059 72 ntBASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 AC048334.1-201ENST00000477975 159 ntBASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 RNU7-156P-201ENST00000517214 74 ntBASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 RNU7-10P-201ENST00000607194 63 ntBASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.46□□□□□ -2.18
TTC9BQ8N6N2 Y_RNA.205-201ENST00000364128 113 ntBASIC1.45□□□□□ -2.18
TTC9BQ8N6N2 SNORD1A-201ENST00000364968 72 ntBASIC1.45□□□□□ -2.18
TTC9BQ8N6N2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.45□□□□□ -2.18
TTC9BQ8N6N2 SNORA75.2-201ENST00000391138 150 ntBASIC1.45□□□□□ -2.18
TTC9BQ8N6N2 SNORA75.3-201ENST00000391231 150 ntBASIC1.45□□□□□ -2.18
TTC9BQ8N6N2 MIR942-201ENST00000401111 86 ntBASIC1.45□□□□□ -2.18
TTC9BQ8N6N2 AC079140.2-201ENST00000506193 142 ntBASIC1.45□□□□□ -2.18
TTC9BQ8N6N2 RNU7-40P-201ENST00000516397 64 ntBASIC1.45□□□□□ -2.18
TTC9BQ8N6N2 RNU6-824P-201ENST00000363724 104 ntBASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 RNY4P3-201ENST00000365254 95 ntBASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 MIR519A1-201ENST00000385257 85 ntBASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 RNU1-78P-201ENST00000391248 165 ntBASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 RNU2-59P-201ENST00000410482 191 ntBASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 AC097635.1-201ENST00000450678 155 ntBASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 RNA5SP61-201ENST00000516453 100 ntBASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 AL353770.2-201ENST00000620024 78 ntBASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.44□□□□□ -2.18
TTC9BQ8N6N2 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 MIR302D-201ENST00000362275 68 ntBASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 RNU6-392P-201ENST00000364926 101 ntBASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 RNU6-535P-201ENST00000384722 107 ntBASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 MIR125B2-201ENST00000385128 89 ntBASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 RNU1-123P-201ENST00000458950 160 ntBASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 snoU13.18-201ENST00000459483 104 ntBASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 AC036111.3-201ENST00000526389 112 ntBASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 MIR3664-201ENST00000579074 99 ntBASIC1.43□□□□□ -2.18
TTC9BQ8N6N2 SNORD33-201ENST00000362761 85 ntBASIC1.42□□□□□ -2.18
TTC9BQ8N6N2 RNU6-895P-201ENST00000384125 103 ntBASIC1.42□□□□□ -2.18
TTC9BQ8N6N2 MIR9-2-201ENST00000384838 87 ntBASIC1.42□□□□□ -2.18
TTC9BQ8N6N2 RNU6-935P-201ENST00000410371 100 ntBASIC1.42□□□□□ -2.18
TTC9BQ8N6N2 MIR3675-201ENST00000583661 73 ntBASIC1.42□□□□□ -2.18
TTC9BQ8N6N2 MIR4773-1-201ENST00000637203 78 ntBASIC1.42□□□□□ -2.18
TTC9BQ8N6N2 SNORD45.1-201ENST00000363181 77 ntBASIC1.41□□□□□ -2.18
TTC9BQ8N6N2 SNORD113.3-201ENST00000364630 78 ntBASIC1.41□□□□□ -2.18
TTC9BQ8N6N2 RNU6-364P-201ENST00000384387 107 ntBASIC1.41□□□□□ -2.18
TTC9BQ8N6N2 SNORA31.2-201ENST00000516019 134 ntBASIC1.41□□□□□ -2.18
TTC9BQ8N6N2 AL512310.8-201ENST00000550183 120 ntBASIC1.41□□□□□ -2.18
TTC9BQ8N6N2 AC138907.6-201ENST00000568401 126 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 175.7 ms