Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MIR6504-201ENST00000613520 61 ntBASIC1.77□□□□□ -2.13
SIX5Q8N196 RNU6-369P-201ENST00000362515 102 ntBASIC1.76□□□□□ -2.13
SIX5Q8N196 RNU6-315P-201ENST00000362666 107 ntBASIC1.76□□□□□ -2.13
SIX5Q8N196 Y_RNA.239-201ENST00000364444 113 ntBASIC1.76□□□□□ -2.13
SIX5Q8N196 RNU6-392P-201ENST00000364926 101 ntBASIC1.76□□□□□ -2.13
SIX5Q8N196 RNU7-56P-201ENST00000458744 62 ntBASIC1.76□□□□□ -2.13
SIX5Q8N196 SNORA16.1-201ENST00000364597 132 ntBASIC1.75□□□□□ -2.13
SIX5Q8N196 AC002429.1-201ENST00000437672 148 ntBASIC1.75□□□□□ -2.13
SIX5Q8N196 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.75□□□□□ -2.13
SIX5Q8N196 SNORD53B-201ENST00000577887 78 ntBASIC1.75□□□□□ -2.13
SIX5Q8N196 AL136317.1-201ENST00000612653 226 ntBASIC1.75□□□□□ -2.13
SIX5Q8N196 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SIX5Q8N196 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.74□□□□□ -2.13
SIX5Q8N196 Y_RNA.94-201ENST00000363068 106 ntBASIC1.74□□□□□ -2.13
SIX5Q8N196 MIR7-2-201ENST00000384970 110 ntBASIC1.74□□□□□ -2.13
SIX5Q8N196 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
SIX5Q8N196 FGF7P7-201ENST00000514120 227 ntBASIC1.74□□□□□ -2.13
SIX5Q8N196 MIR4662A-201ENST00000637499 67 ntBASIC1.74□□□□□ -2.13
SIX5Q8N196 RNA5SP327-201ENST00000362494 101 ntBASIC1.73□□□□□ -2.13
SIX5Q8N196 RNU6-624P-201ENST00000363411 107 ntBASIC1.73□□□□□ -2.13
SIX5Q8N196 RNA5SP363-201ENST00000365072 115 ntBASIC1.73□□□□□ -2.13
SIX5Q8N196 SNORD101-201ENST00000384027 73 ntBASIC1.73□□□□□ -2.13
SIX5Q8N196 AL606490.4-201ENST00000423117 127 ntBASIC1.73□□□□□ -2.13
SIX5Q8N196 AL450471.1-201ENST00000447509 127 ntBASIC1.73□□□□□ -2.13
SIX5Q8N196 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.73□□□□□ -2.13
SIX5Q8N196 RNU1-42P-201ENST00000364033 160 ntBASIC1.72□□□□□ -2.13
SIX5Q8N196 Y_RNA.660-201ENST00000516002 120 ntBASIC1.72□□□□□ -2.13
SIX5Q8N196 RNU6-1094P-201ENST00000362416 104 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 Y_RNA.174-201ENST00000363781 105 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 RNA5SP245-201ENST00000364239 121 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 Y_RNA.221-201ENST00000364248 96 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 RNU6-997P-201ENST00000384725 107 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 Y_RNA.596-201ENST00000410462 109 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 FABP5P4-201ENST00000437203 171 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 RMST_2.1-201ENST00000617263 136 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 U6.100-201ENST00000636230 99 ntBASIC1.71□□□□□ -2.14
SIX5Q8N196 RNU6-664P-201ENST00000362381 107 ntBASIC1.7□□□□□ -2.14
SIX5Q8N196 SNORA63.2-201ENST00000362603 126 ntBASIC1.7□□□□□ -2.14
SIX5Q8N196 SNORA7.1-201ENST00000363750 139 ntBASIC1.7□□□□□ -2.14
SIX5Q8N196 MIR520H-201ENST00000385126 88 ntBASIC1.7□□□□□ -2.14
SIX5Q8N196 AC244505.6-201ENST00000452829 130 ntBASIC1.7□□□□□ -2.14
SIX5Q8N196 RNU6-557P-201ENST00000516842 110 ntBASIC1.7□□□□□ -2.14
SIX5Q8N196 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SIX5Q8N196 RNU5F-1-201ENST00000362507 117 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 RNU6-161P-201ENST00000363051 106 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 RNU6-478P-201ENST00000363904 110 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 RNY4P3-201ENST00000365254 95 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 RNU6-1296P-201ENST00000383879 107 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 RNU6-42P-201ENST00000384165 107 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 RNU6-1108P-201ENST00000516308 104 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 RNU1-92P-201ENST00000517017 135 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 MIR4419B-201ENST00000577260 68 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 MIR4452-201ENST00000583004 71 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 AL078603.1-201ENST00000603824 313 ntBASIC1.69□□□□□ -2.14
SIX5Q8N196 RNU6-686P-201ENST00000364839 107 ntBASIC1.68□□□□□ -2.14
SIX5Q8N196 SNORD89-201ENST00000390981 114 ntBASIC1.68□□□□□ -2.14
SIX5Q8N196 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
SIX5Q8N196 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
SIX5Q8N196 Y_RNA.32-201ENST00000362589 110 ntBASIC1.67□□□□□ -2.14
SIX5Q8N196 SNORD77.2-201ENST00000391045 68 ntBASIC1.67□□□□□ -2.14
SIX5Q8N196 SNORA67.6-201ENST00000391093 99 ntBASIC1.67□□□□□ -2.14
SIX5Q8N196 MIR4696-201ENST00000581431 70 ntBASIC1.67□□□□□ -2.14
SIX5Q8N196 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SIX5Q8N196 Y_RNA.264-201ENST00000364665 102 ntBASIC1.66□□□□□ -2.14
SIX5Q8N196 RNA5SP117-201ENST00000365294 118 ntBASIC1.66□□□□□ -2.14
SIX5Q8N196 RNU6-1265P-201ENST00000516342 103 ntBASIC1.66□□□□□ -2.14
SIX5Q8N196 RNU6-1110P-201ENST00000516462 101 ntBASIC1.66□□□□□ -2.14
SIX5Q8N196 SNORA31.14-201ENST00000516728 116 ntBASIC1.66□□□□□ -2.14
SIX5Q8N196 RNA5SP102-201ENST00000516865 106 ntBASIC1.66□□□□□ -2.14
SIX5Q8N196 RNU6-1057P-201ENST00000517162 102 ntBASIC1.66□□□□□ -2.14
SIX5Q8N196 MIR6734-201ENST00000621166 68 ntBASIC1.66□□□□□ -2.14
SIX5Q8N196 RNU6-776P-201ENST00000364403 104 ntBASIC1.65□□□□□ -2.15
SIX5Q8N196 RNU6-1022P-201ENST00000365049 104 ntBASIC1.65□□□□□ -2.15
SIX5Q8N196 MIR942-201ENST00000401111 86 ntBASIC1.65□□□□□ -2.15
SIX5Q8N196 RNU6-935P-201ENST00000410371 100 ntBASIC1.65□□□□□ -2.15
SIX5Q8N196 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.65□□□□□ -2.15
SIX5Q8N196 RNU1-123P-201ENST00000458950 160 ntBASIC1.65□□□□□ -2.15
SIX5Q8N196 RNA5SP220-201ENST00000516298 104 ntBASIC1.65□□□□□ -2.15
SIX5Q8N196 uc_338.16-201ENST00000621804 95 ntBASIC1.65□□□□□ -2.15
SIX5Q8N196 RNU6-208P-201ENST00000362431 107 ntBASIC1.64□□□□□ -2.15
SIX5Q8N196 SNORD26-201ENST00000384147 75 ntBASIC1.64□□□□□ -2.15
SIX5Q8N196 MIR4421-201ENST00000578133 69 ntBASIC1.64□□□□□ -2.15
SIX5Q8N196 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.64□□□□□ -2.15
SIX5Q8N196 ZNF209P-201ENST00000593450 2304 ntBASIC1.63□□□□□ -2.15
SIX5Q8N196 SNORD115-24-201ENST00000363528 82 ntBASIC1.63□□□□□ -2.15
SIX5Q8N196 RNU6-1051P-201ENST00000365471 102 ntBASIC1.63□□□□□ -2.15
SIX5Q8N196 MIR200A-201ENST00000384875 90 ntBASIC1.63□□□□□ -2.15
SIX5Q8N196 U7.7-201ENST00000459276 60 ntBASIC1.63□□□□□ -2.15
SIX5Q8N196 RNU6-469P-201ENST00000516253 101 ntBASIC1.63□□□□□ -2.15
SIX5Q8N196 RNU7-13P-201ENST00000516413 62 ntBASIC1.63□□□□□ -2.15
SIX5Q8N196 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.62□□□□□ -2.15
SIX5Q8N196 MIRLET7A1-201ENST00000362295 80 ntBASIC1.62□□□□□ -2.15
SIX5Q8N196 SNORD115-44-201ENST00000365391 82 ntBASIC1.62□□□□□ -2.15
SIX5Q8N196 Y_RNA.540-201ENST00000384638 111 ntBASIC1.62□□□□□ -2.15
SIX5Q8N196 SNORD105-201ENST00000386910 85 ntBASIC1.62□□□□□ -2.15
SIX5Q8N196 MTRNR2L2-201ENST00000604882 87 ntBASIC1.62□□□□□ -2.15
SIX5Q8N196 SNORA25.8-201ENST00000364831 128 ntBASIC1.61□□□□□ -2.15
SIX5Q8N196 SNORD48-201ENST00000364953 64 ntBASIC1.61□□□□□ -2.15
SIX5Q8N196 SNORD114-22-201ENST00000365423 72 ntBASIC1.61□□□□□ -2.15
SIX5Q8N196 MIR19B1-201ENST00000384829 87 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 192.8 ms