Protein–RNA interactions for Protein: Q7RTT3

SSX9, Protein SSX9, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX9Q7RTT3 RNU6-238P-201ENST00000363313 106 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 SNORD114-25-201ENST00000363742 72 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 SNORA49-201ENST00000386157 136 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 RNA5SP266-201ENST00000410273 108 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 SNORA13-201ENST00000458790 133 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 RNU6-635P-201ENST00000516651 102 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 RNU7-6P-201ENST00000516845 62 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 MIR3149-201ENST00000584629 83 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 U4.1-201ENST00000620349 87 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 MIR6844-201ENST00000637122 62 ntBASIC-1.31□□□□□ -2.62
SSX9Q7RTT3 RNU6-309P-201ENST00000364573 106 ntBASIC-1.32□□□□□ -2.62
SSX9Q7RTT3 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
SSX9Q7RTT3 RNU6-588P-201ENST00000410281 105 ntBASIC-1.32□□□□□ -2.62
SSX9Q7RTT3 SNORA40.17-201ENST00000517256 115 ntBASIC-1.32□□□□□ -2.62
SSX9Q7RTT3 AC145423.2-201ENST00000610631 239 ntBASIC-1.32□□□□□ -2.62
SSX9Q7RTT3 RNU6-957P-201ENST00000363652 99 ntBASIC-1.33□□□□□ -2.62
SSX9Q7RTT3 Y_RNA.202-201ENST00000364083 110 ntBASIC-1.33□□□□□ -2.62
SSX9Q7RTT3 SCARNA17.3-201ENST00000516381 125 ntBASIC-1.33□□□□□ -2.62
SSX9Q7RTT3 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.33□□□□□ -2.62
SSX9Q7RTT3 AC020661.2-201ENST00000560114 134 ntBASIC-1.33□□□□□ -2.62
SSX9Q7RTT3 RNU4-32P-201ENST00000363404 141 ntBASIC-1.34□□□□□ -2.62
SSX9Q7RTT3 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.34□□□□□ -2.62
SSX9Q7RTT3 AL500527.2-201ENST00000454105 95 ntBASIC-1.34□□□□□ -2.62
SSX9Q7RTT3 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.34□□□□□ -2.62
SSX9Q7RTT3 uc_338.19-201ENST00000616808 99 ntBASIC-1.34□□□□□ -2.62
SSX9Q7RTT3 MTND5P18-201ENST00000445624 1801 ntBASIC-1.35□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.35□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.626-201ENST00000411288 95 ntBASIC-1.35□□□□□ -2.63
SSX9Q7RTT3 AC107027.2-201ENST00000512197 115 ntBASIC-1.35□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.35□□□□□ -2.63
SSX9Q7RTT3 MIR216B-201ENST00000390186 82 ntBASIC-1.36□□□□□ -2.63
SSX9Q7RTT3 RNU6-274P-201ENST00000459566 107 ntBASIC-1.36□□□□□ -2.63
SSX9Q7RTT3 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.36□□□□□ -2.63
SSX9Q7RTT3 MIR4499-201ENST00000584834 69 ntBASIC-1.36□□□□□ -2.63
SSX9Q7RTT3 RNU6-502P-201ENST00000362419 108 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 SNORA33.2-201ENST00000365413 134 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 SNORD101-201ENST00000384027 73 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 RNU6-639P-201ENST00000384074 107 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 MIR518B-201ENST00000385127 83 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 RNU6-721P-201ENST00000410155 105 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 SNORD2-201ENST00000459163 69 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 MIR3179-1-201ENST00000578940 84 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 MIR3179-2-201ENST00000579107 84 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 MIR3179-3-201ENST00000579566 84 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 AC108081.1-201ENST00000604358 221 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 MIR548O2-201ENST00000616090 70 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 MIR3179-4-201ENST00000617599 84 ntBASIC-1.37□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.38□□□□□ -2.63
SSX9Q7RTT3 MTATP8P1-201ENST00000467115 207 ntBASIC-1.38□□□□□ -2.63
SSX9Q7RTT3 RNU6-762P-201ENST00000517107 102 ntBASIC-1.38□□□□□ -2.63
SSX9Q7RTT3 SNORD115-19-201ENST00000363098 82 ntBASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 SNORD115-18-201ENST00000363293 82 ntBASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 SNORD115-17-201ENST00000364612 82 ntBASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 RNU6-973P-201ENST00000364690 107 ntBASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 MIR3646-201ENST00000578301 84 ntBASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 MIR3165-201ENST00000579874 75 ntBASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 MIR4801-201ENST00000582704 82 ntBASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 MIR4320-201ENST00000636981 65 ntBASIC-1.39□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.65-201ENST00000362846 100 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 RNU6-24P-201ENST00000384440 107 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 MIR548H3-201ENST00000408771 118 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 MTND2P23-201ENST00000422990 651 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 MIR4696-201ENST00000581431 70 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 AC021753.1-201ENST00000635724 168 ntBASIC-1.4□□□□□ -2.63
SSX9Q7RTT3 RNU6-664P-201ENST00000362381 107 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.220-201ENST00000364244 109 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 RNU2-38P-201ENST00000410856 79 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 SNORD127-201ENST00000458892 86 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 SNORD22.1-201ENST00000516331 125 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 MIR5704-201ENST00000584029 77 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 RNU6-90P-201ENST00000606352 106 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 MIR1255B1-201ENST00000636325 63 ntBASIC-1.41□□□□□ -2.64
SSX9Q7RTT3 RNY1P11-201ENST00000363759 113 ntBASIC-1.42□□□□□ -2.64
SSX9Q7RTT3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.42□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.42□□□□□ -2.64
SSX9Q7RTT3 MT-TI-201ENST00000387365 69 ntBASIC-1.42□□□□□ -2.64
SSX9Q7RTT3 RNU6-466P-201ENST00000391224 103 ntBASIC-1.42□□□□□ -2.64
SSX9Q7RTT3 SNORA7.5-201ENST00000410672 110 ntBASIC-1.42□□□□□ -2.64
SSX9Q7RTT3 MIR3163-201ENST00000581592 73 ntBASIC-1.42□□□□□ -2.64
SSX9Q7RTT3 AL512310.12-203ENST00000640543 90 ntBASIC-1.42□□□□□ -2.64
SSX9Q7RTT3 Y_RNA.133-201ENST00000363428 110 ntBASIC-1.43□□□□□ -2.64
SSX9Q7RTT3 MIR548E-201ENST00000408287 88 ntBASIC-1.43□□□□□ -2.64
SSX9Q7RTT3 MIR548G-201ENST00000408442 89 ntBASIC-1.43□□□□□ -2.64
SSX9Q7RTT3 MIR378F-201ENST00000578143 78 ntBASIC-1.43□□□□□ -2.64
SSX9Q7RTT3 RNA5SP331-201ENST00000364986 107 ntBASIC-1.44□□□□□ -2.64
SSX9Q7RTT3 MIR582-201ENST00000365731 98 ntBASIC-1.44□□□□□ -2.64
SSX9Q7RTT3 SNORD37.2-201ENST00000391075 66 ntBASIC-1.44□□□□□ -2.64
SSX9Q7RTT3 AC097510.1-201ENST00000510945 133 ntBASIC-1.44□□□□□ -2.64
SSX9Q7RTT3 RNA5SP470-201ENST00000516463 106 ntBASIC-1.44□□□□□ -2.64
SSX9Q7RTT3 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.44□□□□□ -2.64
SSX9Q7RTT3 AC140658.3-201ENST00000567603 271 ntBASIC-1.44□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 228.3 ms