Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.264-201ENST00000364665 102 ntBASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 MIR1257-201ENST00000408490 117 ntBASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-687P-201ENST00000516443 89 ntBASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 AC036111.3-201ENST00000526389 112 ntBASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 MIR6078-201ENST00000611069 100 ntBASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 U6.100-201ENST00000636230 99 ntBASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CNKSR3Q6P9H4 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 AC048334.1-201ENST00000477975 159 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-70P-201ENST00000516438 60 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 RN7SKP88-201ENST00000516847 250 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-303P-201ENST00000517091 106 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 7SK.8-201ENST00000612110 250 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 7SK.11-201ENST00000615477 250 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 7SK.13-201ENST00000622040 250 ntBASIC1.56□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.12-201ENST00000362393 112 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 SNORD113.3-201ENST00000364630 78 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-934P-201ENST00000365154 107 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 SNORA75.2-201ENST00000391138 150 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 SNORA75.3-201ENST00000391231 150 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-807P-201ENST00000516805 107 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-765P-201ENST00000516916 99 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 MIR4696-201ENST00000581431 70 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 MIR1297-201ENST00000637311 77 ntBASIC1.55□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-664P-201ENST00000362381 107 ntBASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-590P-201ENST00000365039 107 ntBASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.330-201ENST00000365230 109 ntBASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.363-201ENST00000365529 113 ntBASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 MIR125B2-201ENST00000385128 89 ntBASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-539P-201ENST00000516665 103 ntBASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 MIR3140-201ENST00000583685 90 ntBASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 RNU7-10P-201ENST00000607194 63 ntBASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.54□□□□□ -2.16
CNKSR3Q6P9H4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 RNA5SP245-201ENST00000364239 121 ntBASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-997P-201ENST00000384725 107 ntBASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 MIR4771-2-201ENST00000577758 74 ntBASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 YWHAEP2-201ENST00000580066 112 ntBASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 MIR4771-1-201ENST00000582617 74 ntBASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 YWHAEP3-201ENST00000582767 121 ntBASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 MTRNR2L2-201ENST00000604882 87 ntBASIC1.53□□□□□ -2.16
CNKSR3Q6P9H4 RNU6-330P-201ENST00000363015 107 ntBASIC1.52□□□□□ -2.17
CNKSR3Q6P9H4 Y_RNA.239-201ENST00000364444 113 ntBASIC1.52□□□□□ -2.17
CNKSR3Q6P9H4 SNORD101-201ENST00000384027 73 ntBASIC1.52□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-634P-201ENST00000459134 106 ntBASIC1.52□□□□□ -2.17
CNKSR3Q6P9H4 Y_RNA.681-201ENST00000516445 113 ntBASIC1.52□□□□□ -2.17
CNKSR3Q6P9H4 RNU5F-1-201ENST00000362507 117 ntBASIC1.51□□□□□ -2.17
CNKSR3Q6P9H4 SNORD114-22-201ENST00000365423 72 ntBASIC1.51□□□□□ -2.17
CNKSR3Q6P9H4 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
CNKSR3Q6P9H4 AC097635.1-201ENST00000450678 155 ntBASIC1.51□□□□□ -2.17
CNKSR3Q6P9H4 RNU7-40P-201ENST00000516397 64 ntBASIC1.51□□□□□ -2.17
CNKSR3Q6P9H4 RNU7-156P-201ENST00000517214 74 ntBASIC1.51□□□□□ -2.17
CNKSR3Q6P9H4 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.51□□□□□ -2.17
CNKSR3Q6P9H4 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-369P-201ENST00000362515 102 ntBASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-42P-201ENST00000384165 107 ntBASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 MIR599-201ENST00000385069 95 ntBASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-587P-201ENST00000391282 106 ntBASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-871P-201ENST00000516122 100 ntBASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-1265P-201ENST00000516342 103 ntBASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 AC023827.1-201ENST00000569247 97 ntBASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 AL078603.1-201ENST00000603824 313 ntBASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
CNKSR3Q6P9H4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-340P-201ENST00000364005 107 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-291P-201ENST00000384720 107 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 RPS26P5-201ENST00000418544 335 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 MIR2113-201ENST00000459007 91 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 SNORA31.2-201ENST00000516019 134 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 RNA5SP220-201ENST00000516298 104 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 MIR4676-201ENST00000583078 72 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 AC106800.4-201ENST00000614905 153 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 RMST_2.1-201ENST00000617263 136 ntBASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
CNKSR3Q6P9H4 Y_RNA.371-201ENST00000365591 113 ntBASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 SNORA24B-201ENST00000384176 131 ntBASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-154P-201ENST00000384306 106 ntBASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-540P-201ENST00000384622 101 ntBASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 Y_RNA.596-201ENST00000410462 109 ntBASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 AC138907.6-201ENST00000568401 126 ntBASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 AC138869.1-201ENST00000568623 124 ntBASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.48□□□□□ -2.17
CNKSR3Q6P9H4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
CNKSR3Q6P9H4 Y_RNA.386-201ENST00000383913 105 ntBASIC1.47□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-1241P-201ENST00000384536 107 ntBASIC1.47□□□□□ -2.17
CNKSR3Q6P9H4 RNU6-535P-201ENST00000384722 107 ntBASIC1.47□□□□□ -2.17
CNKSR3Q6P9H4 MIR942-201ENST00000401111 86 ntBASIC1.47□□□□□ -2.17
CNKSR3Q6P9H4 SNORD111-201ENST00000408139 94 ntBASIC1.47□□□□□ -2.17
CNKSR3Q6P9H4 MIR3660-201ENST00000584845 100 ntBASIC1.47□□□□□ -2.17
CNKSR3Q6P9H4 MIR96-201ENST00000362288 78 ntBASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 SNORD115-31-201ENST00000365318 82 ntBASIC1.46□□□□□ -2.18
CNKSR3Q6P9H4 SNORA8.1-201ENST00000384250 140 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 593.5 ms