Protein–RNA interactions for Protein: Q00978

IRF9, Interferon regulatory factor 9, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9Q00978 AC011195.1-201ENST00000578177 177 ntBASIC1.05□□□□□ -2.24
IRF9Q00978 MIR3612-201ENST00000579753 87 ntBASIC1.05□□□□□ -2.24
IRF9Q00978 SNORD114-21-201ENST00000606412 72 ntBASIC1.05□□□□□ -2.24
IRF9Q00978 RNU6-1260P-201ENST00000362944 107 ntBASIC1.04□□□□□ -2.24
IRF9Q00978 MIR599-201ENST00000385069 95 ntBASIC1.04□□□□□ -2.24
IRF9Q00978 MIR1276-201ENST00000408707 83 ntBASIC1.04□□□□□ -2.24
IRF9Q00978 AL353765.1-201ENST00000605514 183 ntBASIC1.04□□□□□ -2.24
IRF9Q00978 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.04□□□□□ -2.24
IRF9Q00978 MIR1245B-201ENST00000636115 69 ntBASIC1.04□□□□□ -2.24
IRF9Q00978 Y_RNA.191-201ENST00000363972 113 ntBASIC1.03□□□□□ -2.24
IRF9Q00978 RNU6-497P-201ENST00000365316 104 ntBASIC1.03□□□□□ -2.24
IRF9Q00978 AC244098.3-201ENST00000424803 96 ntBASIC1.03□□□□□ -2.24
IRF9Q00978 Y_RNA.648-201ENST00000459455 110 ntBASIC1.03□□□□□ -2.24
IRF9Q00978 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.03□□□□□ -2.24
IRF9Q00978 RNU6-469P-201ENST00000516253 101 ntBASIC1.03□□□□□ -2.24
IRF9Q00978 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.03□□□□□ -2.24
IRF9Q00978 Y_RNA.224-201ENST00000364308 111 ntBASIC1.02□□□□□ -2.25
IRF9Q00978 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
IRF9Q00978 RNU6-135P-201ENST00000516769 101 ntBASIC1.02□□□□□ -2.25
IRF9Q00978 MIR4295-201ENST00000585286 85 ntBASIC1.02□□□□□ -2.25
IRF9Q00978 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.02□□□□□ -2.25
IRF9Q00978 SNORD114-27-201ENST00000363766 70 ntBASIC1.01□□□□□ -2.25
IRF9Q00978 RNU6-979P-201ENST00000383896 107 ntBASIC1.01□□□□□ -2.25
IRF9Q00978 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.01□□□□□ -2.25
IRF9Q00978 MIR5588-201ENST00000581890 63 ntBASIC1.01□□□□□ -2.25
IRF9Q00978 MIR6504-201ENST00000613520 61 ntBASIC1.01□□□□□ -2.25
IRF9Q00978 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.01□□□□□ -2.25
IRF9Q00978 RNU6-633P-201ENST00000362612 103 ntBASIC1□□□□□ -2.25
IRF9Q00978 RNU6-509P-201ENST00000363519 107 ntBASIC1□□□□□ -2.25
IRF9Q00978 SNORD115-27-201ENST00000364430 82 ntBASIC1□□□□□ -2.25
IRF9Q00978 MIR644A-201ENST00000385262 94 ntBASIC1□□□□□ -2.25
IRF9Q00978 RNU6-466P-201ENST00000391224 103 ntBASIC1□□□□□ -2.25
IRF9Q00978 AL161932.1-201ENST00000437408 146 ntBASIC1□□□□□ -2.25
IRF9Q00978 AC087343.1-201ENST00000477341 475 ntBASIC1□□□□□ -2.25
IRF9Q00978 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1□□□□□ -2.25
IRF9Q00978 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.99□□□□□ -2.25
IRF9Q00978 RNU6-1276P-201ENST00000365372 104 ntBASIC0.99□□□□□ -2.25
IRF9Q00978 RNU6-524P-201ENST00000384270 107 ntBASIC0.99□□□□□ -2.25
IRF9Q00978 RNU6-519P-201ENST00000410590 108 ntBASIC0.99□□□□□ -2.25
IRF9Q00978 RNU7-85P-201ENST00000458851 63 ntBASIC0.99□□□□□ -2.25
IRF9Q00978 snoU13.11-201ENST00000459219 104 ntBASIC0.99□□□□□ -2.25
IRF9Q00978 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.99□□□□□ -2.25
IRF9Q00978 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.99□□□□□ -2.25
IRF9Q00978 MIR548BB-201ENST00000626714 66 ntBASIC0.99□□□□□ -2.25
IRF9Q00978 MIR18A-201ENST00000362310 71 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 SNORD115-24-201ENST00000363528 82 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 Y_RNA.219-201ENST00000364232 113 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 RNU4-38P-201ENST00000364472 129 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 Y_RNA.283-201ENST00000364798 112 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 RNU4-45P-201ENST00000365469 141 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 RNU6-242P-201ENST00000384359 107 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 Y_RNA.611-201ENST00000410682 108 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 SNORD4B-201ENST00000459083 72 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 AC103810.9-201ENST00000606688 112 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 AC006160.2-201ENST00000637708 154 ntBASIC0.98□□□□□ -2.25
IRF9Q00978 MIR96-201ENST00000362288 78 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 RNU6-228P-201ENST00000362700 106 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 RNU6-957P-201ENST00000363652 99 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 RNU6-787P-201ENST00000384032 107 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 MIR608-201ENST00000384820 100 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 SNORD78.1-201ENST00000390866 65 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 RNU6-1275P-201ENST00000391087 107 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 RNU7-171P-201ENST00000459581 62 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 MIR3678-201ENST00000578455 94 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 MIR4452-201ENST00000583004 71 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 TRDV1-202ENST00000621643 102 ntBASIC0.97□□□□□ -2.25
IRF9Q00978 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
IRF9Q00978 SNORD18A-201ENST00000363753 72 ntBASIC0.96□□□□□ -2.26
IRF9Q00978 Y_RNA.221-201ENST00000364248 96 ntBASIC0.96□□□□□ -2.26
IRF9Q00978 SNORD114-22-201ENST00000365423 72 ntBASIC0.96□□□□□ -2.26
IRF9Q00978 RNA5SP222-201ENST00000411039 105 ntBASIC0.96□□□□□ -2.26
IRF9Q00978 MIR4639-201ENST00000584938 69 ntBASIC0.96□□□□□ -2.26
IRF9Q00978 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.95□□□□□ -2.26
IRF9Q00978 RNU6-1229P-201ENST00000364295 107 ntBASIC0.95□□□□□ -2.26
IRF9Q00978 Y_RNA.426-201ENST00000384068 113 ntBASIC0.95□□□□□ -2.26
IRF9Q00978 RNU6-1124P-201ENST00000384169 107 ntBASIC0.95□□□□□ -2.26
IRF9Q00978 MIR519C-201ENST00000385053 87 ntBASIC0.95□□□□□ -2.26
IRF9Q00978 RNU6-1265P-201ENST00000516342 103 ntBASIC0.95□□□□□ -2.26
IRF9Q00978 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.94□□□□□ -2.26
IRF9Q00978 RNU4-32P-201ENST00000363404 141 ntBASIC0.94□□□□□ -2.26
IRF9Q00978 SNORD28-201ENST00000384706 75 ntBASIC0.94□□□□□ -2.26
IRF9Q00978 AL606490.4-201ENST00000423117 127 ntBASIC0.94□□□□□ -2.26
IRF9Q00978 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
IRF9Q00978 RNU6-65P-201ENST00000516332 98 ntBASIC0.94□□□□□ -2.26
IRF9Q00978 RNU7-153P-201ENST00000516455 62 ntBASIC0.94□□□□□ -2.26
IRF9Q00978 RNU7-161P-201ENST00000517289 62 ntBASIC0.94□□□□□ -2.26
IRF9Q00978 MIR4666B-201ENST00000578142 81 ntBASIC0.94□□□□□ -2.26
IRF9Q00978 RNA5SP403-201ENST00000363598 108 ntBASIC0.93□□□□□ -2.26
IRF9Q00978 Y_RNA.313-201ENST00000365095 103 ntBASIC0.93□□□□□ -2.26
IRF9Q00978 Y_RNA.437-201ENST00000384113 113 ntBASIC0.93□□□□□ -2.26
IRF9Q00978 RNU6-75P-201ENST00000515944 104 ntBASIC0.93□□□□□ -2.26
IRF9Q00978 Y_RNA.685-201ENST00000516532 108 ntBASIC0.93□□□□□ -2.26
IRF9Q00978 MIR4536-1-201ENST00000583537 88 ntBASIC0.93□□□□□ -2.26
IRF9Q00978 MIR3202-2-201ENST00000635980 79 ntBASIC0.93□□□□□ -2.26
IRF9Q00978 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
IRF9Q00978 MIR1255A-201ENST00000408338 113 ntBASIC0.92□□□□□ -2.26
IRF9Q00978 RNA5SP225-201ENST00000410874 135 ntBASIC0.92□□□□□ -2.26
IRF9Q00978 AC093729.1-201ENST00000513074 128 ntBASIC0.92□□□□□ -2.26
IRF9Q00978 AC244669.1-204ENST00000621564 178 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 202.7 ms