Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 U7.3-201ENST00000616123 62 ntBASIC0.95□□□□□ -2.26
PER3P56645 MIR2052-201ENST00000636055 55 ntBASIC0.95□□□□□ -2.26
PER3P56645 RNU6-1298P-201ENST00000362456 101 ntBASIC0.94□□□□□ -2.26
PER3P56645 Y_RNA.290-201ENST00000364879 114 ntBASIC0.94□□□□□ -2.26
PER3P56645 RNA5SP117-201ENST00000365294 118 ntBASIC0.94□□□□□ -2.26
PER3P56645 SNORD58A-201ENST00000383875 65 ntBASIC0.94□□□□□ -2.26
PER3P56645 RNY1P4-201ENST00000384595 115 ntBASIC0.94□□□□□ -2.26
PER3P56645 MIR608-201ENST00000384820 100 ntBASIC0.94□□□□□ -2.26
PER3P56645 RNU6-972P-201ENST00000391208 107 ntBASIC0.94□□□□□ -2.26
PER3P56645 ACA64.5-201ENST00000516207 127 ntBASIC0.94□□□□□ -2.26
PER3P56645 RNU6-162P-201ENST00000516228 103 ntBASIC0.94□□□□□ -2.26
PER3P56645 RNU6-1254P-201ENST00000391266 104 ntBASIC0.93□□□□□ -2.26
PER3P56645 MIR18A-201ENST00000362310 71 ntBASIC0.92□□□□□ -2.26
PER3P56645 RNU6-1260P-201ENST00000362944 107 ntBASIC0.92□□□□□ -2.26
PER3P56645 RNU6-1187P-201ENST00000364771 110 ntBASIC0.92□□□□□ -2.26
PER3P56645 AC097635.1-201ENST00000450678 155 ntBASIC0.92□□□□□ -2.26
PER3P56645 Y_RNA.809-201ENST00000516058 95 ntBASIC0.92□□□□□ -2.26
PER3P56645 CYP3A137P-201ENST00000562436 69 ntBASIC0.92□□□□□ -2.26
PER3P56645 SNORD114-21-201ENST00000606412 72 ntBASIC0.92□□□□□ -2.26
PER3P56645 MALAT1.1-201ENST00000618249 95 ntBASIC0.92□□□□□ -2.26
PER3P56645 Y_RNA.96-201ENST00000363092 109 ntBASIC0.91□□□□□ -2.26
PER3P56645 Y_RNA.190-201ENST00000363964 101 ntBASIC0.91□□□□□ -2.26
PER3P56645 MIR532-201ENST00000385025 91 ntBASIC0.91□□□□□ -2.26
PER3P56645 MIR599-201ENST00000385069 95 ntBASIC0.91□□□□□ -2.26
PER3P56645 MIR3678-201ENST00000578455 94 ntBASIC0.91□□□□□ -2.26
PER3P56645 RNU6-243P-201ENST00000391140 107 ntBASIC0.9□□□□□ -2.27
PER3P56645 RPL39P28-201ENST00000465655 155 ntBASIC0.9□□□□□ -2.27
PER3P56645 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.9□□□□□ -2.27
PER3P56645 SNORD18A-201ENST00000363753 72 ntBASIC0.89□□□□□ -2.27
PER3P56645 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.89□□□□□ -2.27
PER3P56645 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.88□□□□□ -2.27
PER3P56645 RNU4-38P-201ENST00000364472 129 ntBASIC0.88□□□□□ -2.27
PER3P56645 RNY1P7-201ENST00000384743 110 ntBASIC0.88□□□□□ -2.27
PER3P56645 RNA5SP222-201ENST00000411039 105 ntBASIC0.88□□□□□ -2.27
PER3P56645 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.88□□□□□ -2.27
PER3P56645 snoU13.11-201ENST00000459219 104 ntBASIC0.88□□□□□ -2.27
PER3P56645 Y_RNA.694-201ENST00000516677 117 ntBASIC0.88□□□□□ -2.27
PER3P56645 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.88□□□□□ -2.27
PER3P56645 SNORD116-10-201ENST00000363791 102 ntBASIC0.87□□□□□ -2.27
PER3P56645 RNY1P8-201ENST00000383970 114 ntBASIC0.87□□□□□ -2.27
PER3P56645 RNU6-49P-201ENST00000384256 107 ntBASIC0.87□□□□□ -2.27
PER3P56645 RNU6-524P-201ENST00000384270 107 ntBASIC0.87□□□□□ -2.27
PER3P56645 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
PER3P56645 RNY4P30-201ENST00000410216 95 ntBASIC0.87□□□□□ -2.27
PER3P56645 AL606490.4-201ENST00000423117 127 ntBASIC0.87□□□□□ -2.27
PER3P56645 AL161932.1-201ENST00000437408 146 ntBASIC0.87□□□□□ -2.27
PER3P56645 SNORD115-24-201ENST00000363528 82 ntBASIC0.86□□□□□ -2.27
PER3P56645 RNU6-957P-201ENST00000363652 99 ntBASIC0.86□□□□□ -2.27
PER3P56645 Y_RNA.221-201ENST00000364248 96 ntBASIC0.86□□□□□ -2.27
PER3P56645 RNU6-1131P-201ENST00000364955 107 ntBASIC0.86□□□□□ -2.27
PER3P56645 SNORD28-201ENST00000384706 75 ntBASIC0.86□□□□□ -2.27
PER3P56645 MIR193B-201ENST00000384907 83 ntBASIC0.86□□□□□ -2.27
PER3P56645 RNU7-85P-201ENST00000458851 63 ntBASIC0.86□□□□□ -2.27
PER3P56645 Y_RNA.648-201ENST00000459455 110 ntBASIC0.86□□□□□ -2.27
PER3P56645 RNU7-161P-201ENST00000517289 62 ntBASIC0.86□□□□□ -2.27
PER3P56645 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.86□□□□□ -2.27
PER3P56645 RNA5SP403-201ENST00000363598 108 ntBASIC0.85□□□□□ -2.27
PER3P56645 RNU6-1265P-201ENST00000516342 103 ntBASIC0.85□□□□□ -2.27
PER3P56645 MIR373-201ENST00000362273 69 ntBASIC0.84□□□□□ -2.27
PER3P56645 Y_RNA.374-201ENST00000365606 101 ntBASIC0.84□□□□□ -2.27
PER3P56645 RNU6-75P-201ENST00000515944 104 ntBASIC0.84□□□□□ -2.27
PER3P56645 RNA5SP436-201ENST00000516020 115 ntBASIC0.84□□□□□ -2.27
PER3P56645 RNU6-469P-201ENST00000516253 101 ntBASIC0.84□□□□□ -2.27
PER3P56645 RNU6-135P-201ENST00000516769 101 ntBASIC0.84□□□□□ -2.27
PER3P56645 RNA5SP47-201ENST00000517230 109 ntBASIC0.84□□□□□ -2.27
PER3P56645 MIR4639-201ENST00000584938 69 ntBASIC0.84□□□□□ -2.27
PER3P56645 AC244669.1-204ENST00000621564 178 ntBASIC0.84□□□□□ -2.27
PER3P56645 Y_RNA.283-201ENST00000364798 112 ntBASIC0.83□□□□□ -2.28
PER3P56645 RNU4-45P-201ENST00000365469 141 ntBASIC0.83□□□□□ -2.28
PER3P56645 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
PER3P56645 RNA5SP170-201ENST00000517150 101 ntBASIC0.83□□□□□ -2.28
PER3P56645 MIR5582-201ENST00000579697 68 ntBASIC0.83□□□□□ -2.28
PER3P56645 MIR4653-201ENST00000585107 83 ntBASIC0.83□□□□□ -2.28
PER3P56645 AL590095.2-201ENST00000604136 117 ntBASIC0.83□□□□□ -2.28
PER3P56645 TRDV1-202ENST00000621643 102 ntBASIC0.83□□□□□ -2.28
PER3P56645 SNORA36.1-201ENST00000363424 132 ntBASIC0.82□□□□□ -2.28
PER3P56645 SNORD4B-201ENST00000459083 72 ntBASIC0.82□□□□□ -2.28
PER3P56645 RNA5SP94-201ENST00000516917 108 ntBASIC0.82□□□□□ -2.28
PER3P56645 MIR1273G-201ENST00000577677 100 ntBASIC0.82□□□□□ -2.28
PER3P56645 Y_RNA.220-201ENST00000364244 109 ntBASIC0.81□□□□□ -2.28
PER3P56645 RNU6-844P-201ENST00000517175 102 ntBASIC0.81□□□□□ -2.28
PER3P56645 AC026421.1-201ENST00000519101 163 ntBASIC0.81□□□□□ -2.28
PER3P56645 SNORA36.2-201ENST00000384004 127 ntBASIC0.8□□□□□ -2.28
PER3P56645 RNU6-110P-201ENST00000384508 104 ntBASIC0.8□□□□□ -2.28
PER3P56645 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
PER3P56645 MIR3973-201ENST00000579824 107 ntBASIC0.8□□□□□ -2.28
PER3P56645 MIR6828-201ENST00000636181 60 ntBASIC0.8□□□□□ -2.28
PER3P56645 U6.100-201ENST00000636230 99 ntBASIC0.8□□□□□ -2.28
PER3P56645 Y_RNA.369-201ENST00000365568 117 ntBASIC0.79□□□□□ -2.28
PER3P56645 RNU6-466P-201ENST00000391224 103 ntBASIC0.79□□□□□ -2.28
PER3P56645 Y_RNA.609-201ENST00000410669 89 ntBASIC0.79□□□□□ -2.28
PER3P56645 SCARNA16.5-201ENST00000517114 183 ntBASIC0.79□□□□□ -2.28
PER3P56645 MIR4698-201ENST00000577795 80 ntBASIC0.79□□□□□ -2.28
PER3P56645 RNU6-1229P-201ENST00000364295 107 ntBASIC0.78□□□□□ -2.28
PER3P56645 MIR140-201ENST00000385282 100 ntBASIC0.78□□□□□ -2.28
PER3P56645 RNU6-519P-201ENST00000410590 108 ntBASIC0.78□□□□□ -2.28
PER3P56645 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.78□□□□□ -2.28
PER3P56645 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC0.78□□□□□ -2.28
PER3P56645 RNU7-104P-201ENST00000459398 79 ntBASIC0.78□□□□□ -2.28
PER3P56645 MTRNR2L2-201ENST00000604882 87 ntBASIC0.78□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms