Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.84□□□□□ -1.96
ATN1P54259 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.83□□□□□ -1.96
ATN1P54259 Y_RNA.246-201ENST00000364495 108 ntBASIC2.83□□□□□ -1.96
ATN1P54259 MIR938-201ENST00000401216 83 ntBASIC2.83□□□□□ -1.96
ATN1P54259 RNA5SP270-201ENST00000411361 118 ntBASIC2.83□□□□□ -1.96
ATN1P54259 MIR7110-201ENST00000612638 86 ntBASIC2.83□□□□□ -1.96
ATN1P54259 AC027335.2-201ENST00000624030 375 ntBASIC2.83□□□□□ -1.96
ATN1P54259 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
ATN1P54259 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
ATN1P54259 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.82□□□□□ -1.96
ATN1P54259 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
ATN1P54259 SNORA15B-2-201ENST00000384058 135 ntBASIC2.82□□□□□ -1.96
ATN1P54259 SNORA15B-1-201ENST00000384334 135 ntBASIC2.82□□□□□ -1.96
ATN1P54259 RPS26P5-201ENST00000418544 335 ntBASIC2.82□□□□□ -1.96
ATN1P54259 RNU7-104P-201ENST00000459398 79 ntBASIC2.82□□□□□ -1.96
ATN1P54259 MIR3670-2-201ENST00000582974 65 ntBASIC2.82□□□□□ -1.96
ATN1P54259 MIR3670-1-201ENST00000584160 65 ntBASIC2.82□□□□□ -1.96
ATN1P54259 MIR3670-3-201ENST00000584855 65 ntBASIC2.82□□□□□ -1.96
ATN1P54259 MIR3670-4-201ENST00000612260 65 ntBASIC2.82□□□□□ -1.96
ATN1P54259 MT-TY-201ENST00000387409 66 ntBASIC2.81□□□□□ -1.96
ATN1P54259 RPS29P6-201ENST00000438196 145 ntBASIC2.81□□□□□ -1.96
ATN1P54259 RNU7-102P-201ENST00000458948 62 ntBASIC2.81□□□□□ -1.96
ATN1P54259 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.81□□□□□ -1.96
ATN1P54259 MIR3664-201ENST00000579074 99 ntBASIC2.81□□□□□ -1.96
ATN1P54259 RNU6-247P-201ENST00000362636 107 ntBASIC2.8□□□□□ -1.96
ATN1P54259 Y_RNA.174-201ENST00000363781 105 ntBASIC2.8□□□□□ -1.96
ATN1P54259 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.8□□□□□ -1.96
ATN1P54259 MIR5194-201ENST00000582634 120 ntBASIC2.8□□□□□ -1.96
ATN1P54259 AC067863.3-201ENST00000624172 122 ntBASIC2.8□□□□□ -1.96
ATN1P54259 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATN1P54259 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
ATN1P54259 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
ATN1P54259 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ATN1P54259 RNA5SP393-201ENST00000363423 117 ntBASIC2.79□□□□□ -1.96
ATN1P54259 Y_RNA.325-201ENST00000365171 122 ntBASIC2.79□□□□□ -1.96
ATN1P54259 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
ATN1P54259 snoU13.13-201ENST00000458842 104 ntBASIC2.79□□□□□ -1.96
ATN1P54259 SNORA31.14-201ENST00000516728 116 ntBASIC2.79□□□□□ -1.96
ATN1P54259 AC036111.3-201ENST00000526389 112 ntBASIC2.79□□□□□ -1.96
ATN1P54259 MIR3605-201ENST00000583214 100 ntBASIC2.79□□□□□ -1.96
ATN1P54259 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
ATN1P54259 Y_RNA.125-201ENST00000363371 111 ntBASIC2.78□□□□□ -1.96
ATN1P54259 SNORA40B-201ENST00000385573 128 ntBASIC2.78□□□□□ -1.96
ATN1P54259 AL356320.1-201ENST00000429616 163 ntBASIC2.78□□□□□ -1.96
ATN1P54259 uc_338.16-201ENST00000621804 95 ntBASIC2.78□□□□□ -1.96
ATN1P54259 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.96
ATN1P54259 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.78□□□□□ -1.97
ATN1P54259 Y_RNA.32-201ENST00000362589 110 ntBASIC2.77□□□□□ -1.97
ATN1P54259 RNA5SP247-201ENST00000411181 105 ntBASIC2.77□□□□□ -1.97
ATN1P54259 RNU1-123P-201ENST00000458950 160 ntBASIC2.77□□□□□ -1.97
ATN1P54259 MIR1273D-201ENST00000577266 86 ntBASIC2.77□□□□□ -1.97
ATN1P54259 AL353997.5-201ENST00000618886 171 ntBASIC2.77□□□□□ -1.97
ATN1P54259 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.77□□□□□ -1.97
ATN1P54259 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ATN1P54259 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
ATN1P54259 SNORD114-1-201ENST00000362705 72 ntBASIC2.76□□□□□ -1.97
ATN1P54259 SNORA67.3-201ENST00000384366 140 ntBASIC2.76□□□□□ -1.97
ATN1P54259 RNU6-696P-201ENST00000390834 107 ntBASIC2.76□□□□□ -1.97
ATN1P54259 AL049779.4-201ENST00000604500 156 ntBASIC2.76□□□□□ -1.97
ATN1P54259 AC046143.2-201ENST00000609789 160 ntBASIC2.76□□□□□ -1.97
ATN1P54259 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC2.76□□□□□ -1.97
ATN1P54259 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
ATN1P54259 SNORD116-16-201ENST00000384533 92 ntBASIC2.75□□□□□ -1.97
ATN1P54259 RNU4ATAC4P-201ENST00000516307 126 ntBASIC2.75□□□□□ -1.97
ATN1P54259 AC010297.1-201ENST00000623948 149 ntBASIC2.75□□□□□ -1.97
ATN1P54259 SNORD111-201ENST00000408139 94 ntBASIC2.74□□□□□ -1.97
ATN1P54259 Y_RNA.633-201ENST00000459107 95 ntBASIC2.74□□□□□ -1.97
ATN1P54259 RNA5SP458-201ENST00000516188 119 ntBASIC2.74□□□□□ -1.97
ATN1P54259 RNU7-40P-201ENST00000516397 64 ntBASIC2.74□□□□□ -1.97
ATN1P54259 MIR4460-201ENST00000577862 86 ntBASIC2.74□□□□□ -1.97
ATN1P54259 MIR4529-201ENST00000578110 78 ntBASIC2.74□□□□□ -1.97
ATN1P54259 AL359821.1-201ENST00000605519 182 ntBASIC2.74□□□□□ -1.97
ATN1P54259 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.74□□□□□ -1.97
ATN1P54259 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATN1P54259 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.74□□□□□ -1.97
ATN1P54259 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
ATN1P54259 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
ATN1P54259 SNORA33.1-201ENST00000364957 130 ntBASIC2.73□□□□□ -1.97
ATN1P54259 FO624990.1-201ENST00000636373 85 ntBASIC2.73□□□□□ -1.97
ATN1P54259 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
ATN1P54259 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
ATN1P54259 SUMO1P4-201ENST00000429430 302 ntBASIC2.72□□□□□ -1.97
ATN1P54259 SNORA77B-201ENST00000578179 125 ntBASIC2.72□□□□□ -1.97
ATN1P54259 MIR6873-201ENST00000622788 63 ntBASIC2.72□□□□□ -1.97
ATN1P54259 SNORA31.25-201ENST00000517242 134 ntBASIC2.71□□□□□ -1.98
ATN1P54259 MIR4804-201ENST00000581683 73 ntBASIC2.71□□□□□ -1.98
ATN1P54259 MIR4658-201ENST00000584344 65 ntBASIC2.71□□□□□ -1.98
ATN1P54259 SNORA9.1-201ENST00000362412 131 ntBASIC2.7□□□□□ -1.98
ATN1P54259 Y_RNA.164-201ENST00000363709 102 ntBASIC2.7□□□□□ -1.98
ATN1P54259 SNORA25.8-201ENST00000364831 128 ntBASIC2.7□□□□□ -1.98
ATN1P54259 RNU6-439P-201ENST00000384188 106 ntBASIC2.7□□□□□ -1.98
ATN1P54259 RNA5SP210-201ENST00000391034 120 ntBASIC2.7□□□□□ -1.98
ATN1P54259 RNU1-119P-201ENST00000391122 165 ntBASIC2.7□□□□□ -1.98
ATN1P54259 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
ATN1P54259 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
ATN1P54259 RNU6-810P-201ENST00000364001 107 ntBASIC2.69□□□□□ -1.98
ATN1P54259 HMGN2P23-201ENST00000456759 269 ntBASIC2.69□□□□□ -1.98
ATN1P54259 SNORA31.2-201ENST00000516019 134 ntBASIC2.69□□□□□ -1.98
ATN1P54259 RNU6-419P-201ENST00000517030 63 ntBASIC2.69□□□□□ -1.98
ATN1P54259 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms