Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
CLK3P49761 RNU7-95P-201ENST00000459222 64 ntBASIC1.21□□□□□ -2.22
CLK3P49761 RNU7-21P-201ENST00000459430 62 ntBASIC1.21□□□□□ -2.22
CLK3P49761 RNU6-1108P-201ENST00000516308 104 ntBASIC1.21□□□□□ -2.22
CLK3P49761 Y_RNA.697-201ENST00000516776 113 ntBASIC1.21□□□□□ -2.22
CLK3P49761 RNU6-448P-201ENST00000517052 107 ntBASIC1.21□□□□□ -2.22
CLK3P49761 AC138907.6-201ENST00000568401 126 ntBASIC1.21□□□□□ -2.22
CLK3P49761 AC138869.1-201ENST00000568623 124 ntBASIC1.21□□□□□ -2.22
CLK3P49761 MIR4676-201ENST00000583078 72 ntBASIC1.21□□□□□ -2.22
CLK3P49761 TRDV1-202ENST00000621643 102 ntBASIC1.21□□□□□ -2.22
CLK3P49761 Y_RNA.565-201ENST00000384719 101 ntBASIC1.2□□□□□ -2.22
CLK3P49761 MIR520H-201ENST00000385126 88 ntBASIC1.2□□□□□ -2.22
CLK3P49761 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
CLK3P49761 AC015818.7-201ENST00000428754 109 ntBASIC1.2□□□□□ -2.22
CLK3P49761 SNORD79.1-201ENST00000516069 84 ntBASIC1.2□□□□□ -2.22
CLK3P49761 RNU7-40P-201ENST00000516397 64 ntBASIC1.2□□□□□ -2.22
CLK3P49761 AL157834.3-201ENST00000615543 103 ntBASIC1.2□□□□□ -2.22
CLK3P49761 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CLK3P49761 SNORD12-201ENST00000391002 90 ntBASIC1.19□□□□□ -2.22
CLK3P49761 MIR938-201ENST00000401216 83 ntBASIC1.19□□□□□ -2.22
CLK3P49761 RNU7-90P-201ENST00000459216 62 ntBASIC1.19□□□□□ -2.22
CLK3P49761 AC139453.2-201ENST00000487255 133 ntBASIC1.19□□□□□ -2.22
CLK3P49761 AC023827.1-201ENST00000569247 97 ntBASIC1.19□□□□□ -2.22
CLK3P49761 AC027335.2-201ENST00000624030 375 ntBASIC1.19□□□□□ -2.22
CLK3P49761 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
CLK3P49761 RNU6-208P-201ENST00000362431 107 ntBASIC1.18□□□□□ -2.22
CLK3P49761 Y_RNA.239-201ENST00000364444 113 ntBASIC1.18□□□□□ -2.22
CLK3P49761 RNU6-364P-201ENST00000384387 107 ntBASIC1.18□□□□□ -2.22
CLK3P49761 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
CLK3P49761 AL606490.4-201ENST00000423117 127 ntBASIC1.18□□□□□ -2.22
CLK3P49761 MTRNR2L2-201ENST00000604882 87 ntBASIC1.18□□□□□ -2.22
CLK3P49761 AL353770.2-201ENST00000620024 78 ntBASIC1.18□□□□□ -2.22
CLK3P49761 MIR1297-201ENST00000637311 77 ntBASIC1.18□□□□□ -2.22
CLK3P49761 RNU6-664P-201ENST00000362381 107 ntBASIC1.17□□□□□ -2.22
CLK3P49761 SNORD101-201ENST00000384027 73 ntBASIC1.17□□□□□ -2.22
CLK3P49761 RNU6-535P-201ENST00000384722 107 ntBASIC1.17□□□□□ -2.22
CLK3P49761 MIR599-201ENST00000385069 95 ntBASIC1.17□□□□□ -2.22
CLK3P49761 MIR618-201ENST00000385287 98 ntBASIC1.17□□□□□ -2.22
CLK3P49761 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
CLK3P49761 RNU6-807P-201ENST00000516805 107 ntBASIC1.17□□□□□ -2.22
CLK3P49761 MIR4696-201ENST00000581431 70 ntBASIC1.17□□□□□ -2.22
CLK3P49761 RNU6-369P-201ENST00000362515 102 ntBASIC1.16□□□□□ -2.22
CLK3P49761 RNY4P3-201ENST00000365254 95 ntBASIC1.16□□□□□ -2.22
CLK3P49761 RNU6-1051P-201ENST00000365471 102 ntBASIC1.16□□□□□ -2.22
CLK3P49761 RNU6-291P-201ENST00000384720 107 ntBASIC1.16□□□□□ -2.22
CLK3P49761 SNORD90-201ENST00000391145 111 ntBASIC1.16□□□□□ -2.22
CLK3P49761 Y_RNA.596-201ENST00000410462 109 ntBASIC1.16□□□□□ -2.22
CLK3P49761 SCARNA18B-201ENST00000458806 135 ntBASIC1.16□□□□□ -2.22
CLK3P49761 RNU7-102P-201ENST00000458948 62 ntBASIC1.16□□□□□ -2.22
CLK3P49761 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.16□□□□□ -2.22
CLK3P49761 MIR6078-201ENST00000611069 100 ntBASIC1.16□□□□□ -2.22
CLK3P49761 Y_RNA.788-201ENST00000622394 112 ntBASIC1.16□□□□□ -2.22
CLK3P49761 RNU5F-1-201ENST00000362507 117 ntBASIC1.15□□□□□ -2.23
CLK3P49761 Y_RNA.532-201ENST00000384590 113 ntBASIC1.15□□□□□ -2.23
CLK3P49761 RNU6-994P-201ENST00000410507 111 ntBASIC1.15□□□□□ -2.23
CLK3P49761 AC244505.6-201ENST00000452829 130 ntBASIC1.15□□□□□ -2.23
CLK3P49761 RNU6-523P-201ENST00000516304 54 ntBASIC1.15□□□□□ -2.23
CLK3P49761 RNU6-1265P-201ENST00000516342 103 ntBASIC1.15□□□□□ -2.23
CLK3P49761 RNU6-977P-201ENST00000516411 103 ntBASIC1.15□□□□□ -2.23
CLK3P49761 RNU6-303P-201ENST00000517091 106 ntBASIC1.15□□□□□ -2.23
CLK3P49761 MIR4804-201ENST00000581683 73 ntBASIC1.15□□□□□ -2.23
CLK3P49761 AC008608.1-201ENST00000603910 127 ntBASIC1.15□□□□□ -2.23
CLK3P49761 U6.100-201ENST00000636230 99 ntBASIC1.15□□□□□ -2.23
CLK3P49761 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
CLK3P49761 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.14□□□□□ -2.23
CLK3P49761 RNA5SP245-201ENST00000364239 121 ntBASIC1.14□□□□□ -2.23
CLK3P49761 RNU6-411P-201ENST00000384451 107 ntBASIC1.14□□□□□ -2.23
CLK3P49761 AC002429.1-201ENST00000437672 148 ntBASIC1.14□□□□□ -2.23
CLK3P49761 RNU7-56P-201ENST00000458744 62 ntBASIC1.14□□□□□ -2.23
CLK3P49761 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.14□□□□□ -2.23
CLK3P49761 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
CLK3P49761 RNA5SP404-201ENST00000517118 132 ntBASIC1.14□□□□□ -2.23
CLK3P49761 MIR3134-201ENST00000579433 74 ntBASIC1.14□□□□□ -2.23
CLK3P49761 YWHAEP2-201ENST00000580066 112 ntBASIC1.14□□□□□ -2.23
CLK3P49761 YWHAEP3-201ENST00000582767 121 ntBASIC1.14□□□□□ -2.23
CLK3P49761 MIR3660-201ENST00000584845 100 ntBASIC1.14□□□□□ -2.23
CLK3P49761 AL359821.1-201ENST00000605519 182 ntBASIC1.14□□□□□ -2.23
CLK3P49761 MIR1-1-201ENST00000362147 71 ntBASIC1.13□□□□□ -2.23
CLK3P49761 MIR100-201ENST00000385259 80 ntBASIC1.13□□□□□ -2.23
CLK3P49761 RNU1-119P-201ENST00000391122 165 ntBASIC1.13□□□□□ -2.23
CLK3P49761 AC074348.1-201ENST00000426503 132 ntBASIC1.13□□□□□ -2.23
CLK3P49761 snoU13.17-201ENST00000458802 104 ntBASIC1.13□□□□□ -2.23
CLK3P49761 snoU13.31-201ENST00000607291 104 ntBASIC1.13□□□□□ -2.23
CLK3P49761 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.13□□□□□ -2.23
CLK3P49761 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CLK3P49761 Y_RNA.12-201ENST00000362393 112 ntBASIC1.12□□□□□ -2.23
CLK3P49761 Y_RNA.207-201ENST00000364142 106 ntBASIC1.12□□□□□ -2.23
CLK3P49761 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
CLK3P49761 MIR1285-1-201ENST00000408593 84 ntBASIC1.12□□□□□ -2.23
CLK3P49761 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.12□□□□□ -2.23
CLK3P49761 RNU6-935P-201ENST00000410371 100 ntBASIC1.12□□□□□ -2.23
CLK3P49761 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.12□□□□□ -2.23
CLK3P49761 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.12□□□□□ -2.23
CLK3P49761 RNU1-124P-201ENST00000363861 145 ntBASIC1.11□□□□□ -2.23
CLK3P49761 RNU6-788P-201ENST00000390967 104 ntBASIC1.11□□□□□ -2.23
CLK3P49761 MIR1827-201ENST00000408549 66 ntBASIC1.11□□□□□ -2.23
CLK3P49761 AC067940.1-201ENST00000458411 300 ntBASIC1.11□□□□□ -2.23
CLK3P49761 Y_RNA.681-201ENST00000516445 113 ntBASIC1.11□□□□□ -2.23
CLK3P49761 MIR3124-201ENST00000582636 67 ntBASIC1.11□□□□□ -2.23
CLK3P49761 MIR4484-201ENST00000582855 83 ntBASIC1.11□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms