Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 SNORD92-201ENST00000585078 85 ntBASIC1.01□□□□□ -2.25
THBS3P49746 AC008608.1-201ENST00000603910 127 ntBASIC1.01□□□□□ -2.25
THBS3P49746 MIR6734-201ENST00000621166 68 ntBASIC1.01□□□□□ -2.25
THBS3P49746 MIRLET7F1-201ENST00000362202 87 ntBASIC1□□□□□ -2.25
THBS3P49746 RNA5SP245-201ENST00000364239 121 ntBASIC1□□□□□ -2.25
THBS3P49746 RNU6-364P-201ENST00000384387 107 ntBASIC1□□□□□ -2.25
THBS3P49746 RNU6-291P-201ENST00000384720 107 ntBASIC1□□□□□ -2.25
THBS3P49746 MIR518E-201ENST00000385252 88 ntBASIC1□□□□□ -2.25
THBS3P49746 MIR519A1-201ENST00000385257 85 ntBASIC1□□□□□ -2.25
THBS3P49746 RNU7-102P-201ENST00000458948 62 ntBASIC1□□□□□ -2.25
THBS3P49746 SNORA70.22-201ENST00000517160 124 ntBASIC1□□□□□ -2.25
THBS3P49746 MIR4796-201ENST00000580742 81 ntBASIC1□□□□□ -2.25
THBS3P49746 MIR3064-201ENST00000581130 66 ntBASIC1□□□□□ -2.25
THBS3P49746 AL078603.1-201ENST00000603824 313 ntBASIC1□□□□□ -2.25
THBS3P49746 AC027335.2-201ENST00000624030 375 ntBASIC1□□□□□ -2.25
THBS3P49746 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1□□□□□ -2.25
THBS3P49746 Y_RNA.221-201ENST00000364248 96 ntBASIC0.99□□□□□ -2.25
THBS3P49746 RNU6-24P-201ENST00000384440 107 ntBASIC0.99□□□□□ -2.25
THBS3P49746 MIR100-201ENST00000385259 80 ntBASIC0.99□□□□□ -2.25
THBS3P49746 MIR938-201ENST00000401216 83 ntBASIC0.99□□□□□ -2.25
THBS3P49746 MIR1276-201ENST00000408707 83 ntBASIC0.99□□□□□ -2.25
THBS3P49746 AL450471.1-201ENST00000447509 127 ntBASIC0.99□□□□□ -2.25
THBS3P49746 RNU6-977P-201ENST00000516411 103 ntBASIC0.99□□□□□ -2.25
THBS3P49746 SNORA18.5-201ENST00000516616 101 ntBASIC0.99□□□□□ -2.25
THBS3P49746 MIR4804-201ENST00000581683 73 ntBASIC0.99□□□□□ -2.25
THBS3P49746 AC104996.3-201ENST00000590718 94 ntBASIC0.99□□□□□ -2.25
THBS3P49746 RNU7-10P-201ENST00000607194 63 ntBASIC0.99□□□□□ -2.25
THBS3P49746 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC0.99□□□□□ -2.25
THBS3P49746 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
THBS3P49746 RNU6-1260P-201ENST00000362944 107 ntBASIC0.98□□□□□ -2.25
THBS3P49746 RNU6-478P-201ENST00000363904 110 ntBASIC0.98□□□□□ -2.25
THBS3P49746 RNU6-939P-201ENST00000384634 107 ntBASIC0.98□□□□□ -2.25
THBS3P49746 RNU6-535P-201ENST00000384722 107 ntBASIC0.98□□□□□ -2.25
THBS3P49746 MIR1285-1-201ENST00000408593 84 ntBASIC0.98□□□□□ -2.25
THBS3P49746 RNU7-56P-201ENST00000458744 62 ntBASIC0.98□□□□□ -2.25
THBS3P49746 AC019288.1-201ENST00000557918 224 ntBASIC0.98□□□□□ -2.25
THBS3P49746 TRDV1-202ENST00000621643 102 ntBASIC0.98□□□□□ -2.25
THBS3P49746 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.98□□□□□ -2.25
THBS3P49746 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
THBS3P49746 RNA5SP327-201ENST00000362494 101 ntBASIC0.97□□□□□ -2.25
THBS3P49746 RNU6-42P-201ENST00000384165 107 ntBASIC0.97□□□□□ -2.25
THBS3P49746 Y_RNA.491-201ENST00000384417 107 ntBASIC0.97□□□□□ -2.25
THBS3P49746 MIR222-201ENST00000384992 110 ntBASIC0.97□□□□□ -2.25
THBS3P49746 MIR599-201ENST00000385069 95 ntBASIC0.97□□□□□ -2.25
THBS3P49746 RNU6-129P-201ENST00000391022 107 ntBASIC0.97□□□□□ -2.25
THBS3P49746 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
THBS3P49746 AC002429.1-201ENST00000437672 148 ntBASIC0.97□□□□□ -2.25
THBS3P49746 AC097635.1-201ENST00000450678 155 ntBASIC0.97□□□□□ -2.25
THBS3P49746 snoU13.18-201ENST00000459483 104 ntBASIC0.97□□□□□ -2.25
THBS3P49746 OR2A41P-201ENST00000473586 105 ntBASIC0.97□□□□□ -2.25
THBS3P49746 MIR6504-201ENST00000613520 61 ntBASIC0.97□□□□□ -2.25
THBS3P49746 U6.100-201ENST00000636230 99 ntBASIC0.97□□□□□ -2.25
THBS3P49746 MIR1-1-201ENST00000362147 71 ntBASIC0.96□□□□□ -2.26
THBS3P49746 RNU6-624P-201ENST00000363411 107 ntBASIC0.96□□□□□ -2.26
THBS3P49746 MIR520F-201ENST00000384824 87 ntBASIC0.96□□□□□ -2.26
THBS3P49746 SNORD90-201ENST00000391145 111 ntBASIC0.96□□□□□ -2.26
THBS3P49746 RNA5SP102-201ENST00000516865 106 ntBASIC0.96□□□□□ -2.26
THBS3P49746 AC138907.6-201ENST00000568401 126 ntBASIC0.96□□□□□ -2.26
THBS3P49746 AC138869.1-201ENST00000568623 124 ntBASIC0.96□□□□□ -2.26
THBS3P49746 MIR4295-201ENST00000585286 85 ntBASIC0.96□□□□□ -2.26
THBS3P49746 SNORA25.8-201ENST00000364831 128 ntBASIC0.95□□□□□ -2.26
THBS3P49746 SNORA25-201ENST00000384384 134 ntBASIC0.95□□□□□ -2.26
THBS3P49746 MIR618-201ENST00000385287 98 ntBASIC0.95□□□□□ -2.26
THBS3P49746 MIR548U-201ENST00000390728 81 ntBASIC0.95□□□□□ -2.26
THBS3P49746 SNORD12-201ENST00000391002 90 ntBASIC0.95□□□□□ -2.26
THBS3P49746 RNU1-119P-201ENST00000391122 165 ntBASIC0.95□□□□□ -2.26
THBS3P49746 MIR1827-201ENST00000408549 66 ntBASIC0.95□□□□□ -2.26
THBS3P49746 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.95□□□□□ -2.26
THBS3P49746 RNA5SP220-201ENST00000516298 104 ntBASIC0.95□□□□□ -2.26
THBS3P49746 Y_RNA.32-201ENST00000362589 110 ntBASIC0.94□□□□□ -2.26
THBS3P49746 SNORA63.2-201ENST00000362603 126 ntBASIC0.94□□□□□ -2.26
THBS3P49746 RNU6-161P-201ENST00000363051 106 ntBASIC0.94□□□□□ -2.26
THBS3P49746 MIR889-201ENST00000401280 79 ntBASIC0.94□□□□□ -2.26
THBS3P49746 RNU6-1108P-201ENST00000516308 104 ntBASIC0.94□□□□□ -2.26
THBS3P49746 RMST_2.1-201ENST00000617263 136 ntBASIC0.94□□□□□ -2.26
THBS3P49746 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC0.94□□□□□ -2.26
THBS3P49746 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
THBS3P49746 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
THBS3P49746 RNU6-315P-201ENST00000362666 107 ntBASIC0.93□□□□□ -2.26
THBS3P49746 MIR489-201ENST00000384923 84 ntBASIC0.93□□□□□ -2.26
THBS3P49746 AC067940.1-201ENST00000458411 300 ntBASIC0.93□□□□□ -2.26
THBS3P49746 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.93□□□□□ -2.26
THBS3P49746 RNU6-1265P-201ENST00000516342 103 ntBASIC0.93□□□□□ -2.26
THBS3P49746 SNORA31.14-201ENST00000516728 116 ntBASIC0.93□□□□□ -2.26
THBS3P49746 MIR4696-201ENST00000581431 70 ntBASIC0.93□□□□□ -2.26
THBS3P49746 MIR4452-201ENST00000583004 71 ntBASIC0.93□□□□□ -2.26
THBS3P49746 RNU6-664P-201ENST00000362381 107 ntBASIC0.92□□□□□ -2.26
THBS3P49746 RNU6-1296P-201ENST00000383879 107 ntBASIC0.92□□□□□ -2.26
THBS3P49746 SNORD101-201ENST00000384027 73 ntBASIC0.92□□□□□ -2.26
THBS3P49746 MIR520H-201ENST00000385126 88 ntBASIC0.92□□□□□ -2.26
THBS3P49746 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
THBS3P49746 AC244505.6-201ENST00000452829 130 ntBASIC0.92□□□□□ -2.26
THBS3P49746 RNU6-557P-201ENST00000516842 110 ntBASIC0.92□□□□□ -2.26
THBS3P49746 uc_338.16-201ENST00000621804 95 ntBASIC0.92□□□□□ -2.26
THBS3P49746 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC0.91□□□□□ -2.26
THBS3P49746 MIRLET7A1-201ENST00000362295 80 ntBASIC0.91□□□□□ -2.26
THBS3P49746 RNU6-776P-201ENST00000364403 104 ntBASIC0.91□□□□□ -2.26
THBS3P49746 Y_RNA.239-201ENST00000364444 113 ntBASIC0.91□□□□□ -2.26
THBS3P49746 RNU6-1022P-201ENST00000365049 104 ntBASIC0.91□□□□□ -2.26
THBS3P49746 SNORD89-201ENST00000390981 114 ntBASIC0.91□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 215.9 ms