Protein–RNA interactions for Protein: P38398

BRCA1, Breast cancer type 1 susceptibility protein, humanhuman

Known RBP Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1P38398 Y_RNA.133-201ENST00000363428 110 ntBASIC-0.68□□□□□ -2.52
BRCA1P38398 RNU6-957P-201ENST00000363652 99 ntBASIC-0.68□□□□□ -2.52
BRCA1P38398 SNORA51.5-201ENST00000384126 131 ntBASIC-0.68□□□□□ -2.52
BRCA1P38398 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.68□□□□□ -2.52
BRCA1P38398 RNA5SP66-201ENST00000517178 101 ntBASIC-0.68□□□□□ -2.52
BRCA1P38398 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.69□□□□□ -2.52
BRCA1P38398 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.69□□□□□ -2.52
BRCA1P38398 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.69□□□□□ -2.52
BRCA1P38398 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.69□□□□□ -2.52
BRCA1P38398 Y_RNA.20-201ENST00000362479 113 ntBASIC-0.69□□□□□ -2.52
BRCA1P38398 RNU6-616P-201ENST00000384353 107 ntBASIC-0.69□□□□□ -2.52
BRCA1P38398 Y_RNA.507-201ENST00000384500 99 ntBASIC-0.69□□□□□ -2.52
BRCA1P38398 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.69□□□□□ -2.52
BRCA1P38398 MIR9-2-201ENST00000384838 87 ntBASIC-0.69□□□□□ -2.52
BRCA1P38398 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.7□□□□□ -2.52
BRCA1P38398 SNORD56B-201ENST00000384713 71 ntBASIC-0.7□□□□□ -2.52
BRCA1P38398 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.7□□□□□ -2.52
BRCA1P38398 MIR548H3-201ENST00000408771 118 ntBASIC-0.7□□□□□ -2.52
BRCA1P38398 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.7□□□□□ -2.52
BRCA1P38398 AC107027.2-201ENST00000512197 115 ntBASIC-0.7□□□□□ -2.52
BRCA1P38398 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.7□□□□□ -2.52
BRCA1P38398 MIR1255B1-201ENST00000636325 63 ntBASIC-0.7□□□□□ -2.52
BRCA1P38398 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 RNU6-239P-201ENST00000390990 99 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 MTATP6P21-201ENST00000440681 189 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.71□□□□□ -2.52
BRCA1P38398 MIR548AE1-201ENST00000583292 70 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 RNU6-47P-201ENST00000383866 107 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 SNORA3B-201ENST00000391305 131 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 SNX3P1X-201ENST00000414887 175 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 AC244090.1-201ENST00000441884 93 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.71□□□□□ -2.52
BRCA1P38398 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.72□□□□□ -2.52
BRCA1P38398 MIR204-201ENST00000385200 110 ntBASIC-0.72□□□□□ -2.52
BRCA1P38398 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.72□□□□□ -2.52
BRCA1P38398 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.72□□□□□ -2.52
BRCA1P38398 AP002392.1-201ENST00000537692 208 ntBASIC-0.72□□□□□ -2.52
BRCA1P38398 AL442128.1-201ENST00000615151 90 ntBASIC-0.72□□□□□ -2.52
BRCA1P38398 MIR198-201ENST00000637333 62 ntBASIC-0.72□□□□□ -2.52
BRCA1P38398 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.73□□□□□ -2.53
BRCA1P38398 MIR3128-201ENST00000581957 66 ntBASIC-0.73□□□□□ -2.53
BRCA1P38398 RNU6-900P-201ENST00000384498 102 ntBASIC-0.73□□□□□ -2.53
BRCA1P38398 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.73□□□□□ -2.53
BRCA1P38398 MTND2P23-201ENST00000422990 651 ntBASIC-0.73□□□□□ -2.53
BRCA1P38398 RNU6-719P-201ENST00000516671 104 ntBASIC-0.73□□□□□ -2.53
BRCA1P38398 AL117187.1-201ENST00000555482 181 ntBASIC-0.73□□□□□ -2.53
BRCA1P38398 RNU6-235P-201ENST00000362644 107 ntBASIC-0.74□□□□□ -2.53
BRCA1P38398 RNU6-363P-201ENST00000362895 105 ntBASIC-0.74□□□□□ -2.53
BRCA1P38398 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.74□□□□□ -2.53
BRCA1P38398 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.74□□□□□ -2.53
BRCA1P38398 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.74□□□□□ -2.53
BRCA1P38398 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.74□□□□□ -2.53
BRCA1P38398 AC062037.2-201ENST00000610137 73 ntBASIC-0.74□□□□□ -2.53
BRCA1P38398 MIR6854-201ENST00000614935 69 ntBASIC-0.74□□□□□ -2.53
BRCA1P38398 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.75□□□□□ -2.53
BRCA1P38398 MIR34C-201ENST00000384831 77 ntBASIC-0.75□□□□□ -2.53
BRCA1P38398 MIR652-201ENST00000385278 98 ntBASIC-0.75□□□□□ -2.53
BRCA1P38398 MIR548F4-201ENST00000408515 105 ntBASIC-0.75□□□□□ -2.53
BRCA1P38398 RNU7-6P-201ENST00000516845 62 ntBASIC-0.75□□□□□ -2.53
BRCA1P38398 Y_RNA.200-201ENST00000364018 102 ntBASIC-0.75□□□□□ -2.53
BRCA1P38398 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.75□□□□□ -2.53
BRCA1P38398 SNORD101-201ENST00000384027 73 ntBASIC-0.76□□□□□ -2.53
BRCA1P38398 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.76□□□□□ -2.53
BRCA1P38398 AL117351.2-201ENST00000513571 157 ntBASIC-0.76□□□□□ -2.53
BRCA1P38398 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.76□□□□□ -2.53
BRCA1P38398 AC022559.1-201ENST00000520905 205 ntBASIC-0.76□□□□□ -2.53
BRCA1P38398 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.76□□□□□ -2.53
BRCA1P38398 MIR3163-201ENST00000581592 73 ntBASIC-0.76□□□□□ -2.53
BRCA1P38398 MIR6851-201ENST00000617060 67 ntBASIC-0.76□□□□□ -2.53
BRCA1P38398 MIR3658-201ENST00000636291 56 ntBASIC-0.76□□□□□ -2.53
BRCA1P38398 Y_RNA.215-201ENST00000364204 112 ntBASIC-0.77□□□□□ -2.53
BRCA1P38398 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.77□□□□□ -2.53
BRCA1P38398 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.77□□□□□ -2.53
BRCA1P38398 RNU6-138P-201ENST00000515952 107 ntBASIC-0.77□□□□□ -2.53
BRCA1P38398 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-0.77□□□□□ -2.53
BRCA1P38398 MIR4696-201ENST00000581431 70 ntBASIC-0.77□□□□□ -2.53
BRCA1P38398 MIR4536-1-201ENST00000583537 88 ntBASIC-0.77□□□□□ -2.53
BRCA1P38398 TRDV1-202ENST00000621643 102 ntBASIC-0.77□□□□□ -2.53
BRCA1P38398 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-0.77□□□□□ -2.53
BRCA1P38398 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 MIR196A1-201ENST00000388006 70 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 MIR513C-201ENST00000401352 84 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 SNORA13-201ENST00000458790 133 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 AC130289.1-201ENST00000577321 73 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 Y_RNA.288-201ENST00000364854 92 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 RNU6-1318P-201ENST00000365389 103 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 RNU7-121P-201ENST00000516604 62 ntBASIC-0.78□□□□□ -2.53
BRCA1P38398 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 SNORD38.1-201ENST00000363863 68 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 SNORA49-201ENST00000386157 136 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 RNA5SP136-201ENST00000410906 107 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 SPINT5P-201ENST00000448174 155 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 AC021146.6-201ENST00000514659 117 ntBASIC-0.79□□□□□ -2.54
BRCA1P38398 RNU6-75P-201ENST00000515944 104 ntBASIC-0.79□□□□□ -2.54
Retrieved 100 of 98,524 protein–RNA pairs in 169.9 ms