Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SNORD114-29-201ENST00000364819 70 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 AC006210.1-201ENST00000424882 111 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 RNU7-120P-201ENST00000459334 63 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 MIR3658-201ENST00000636291 56 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 RNU6-363P-201ENST00000362895 105 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 RNU6-647P-201ENST00000364243 107 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 Y_RNA.400-201ENST00000383963 111 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 MTATP6P21-201ENST00000440681 189 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 RNU6-388P-201ENST00000517012 105 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 RNU6-389P-201ENST00000517048 105 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 SNORA81.3-201ENST00000517283 198 ntBASIC-0.29□□□□□ -2.46
SCN4AP35499 Y_RNA.32-201ENST00000362589 110 ntBASIC-0.3□□□□□ -2.46
SCN4AP35499 RNU6-170P-201ENST00000362832 104 ntBASIC-0.3□□□□□ -2.46
SCN4AP35499 Y_RNA.188-201ENST00000363952 111 ntBASIC-0.3□□□□□ -2.46
SCN4AP35499 MT-TY-201ENST00000387409 66 ntBASIC-0.3□□□□□ -2.46
SCN4AP35499 MIR3666-201ENST00000607845 111 ntBASIC-0.3□□□□□ -2.46
SCN4AP35499 MIR1255B1-201ENST00000636325 63 ntBASIC-0.3□□□□□ -2.46
SCN4AP35499 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 RNU6-682P-201ENST00000363843 106 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 SNORD14C-201ENST00000365382 88 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 RNA5SP300-201ENST00000391197 107 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 RNU7-188P-201ENST00000517063 64 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 MIR548AX-201ENST00000580117 73 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 Y_RNA.401-201ENST00000383965 117 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 Y_RNA.528-201ENST00000384575 108 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 Y_RNA.809-201ENST00000516058 95 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 AC004792.1-201ENST00000614523 137 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 MIR6514-201ENST00000622549 70 ntBASIC-0.31□□□□□ -2.46
SCN4AP35499 Y_RNA.198-201ENST00000364013 98 ntBASIC-0.32□□□□□ -2.46
SCN4AP35499 RNU6-80P-201ENST00000384195 107 ntBASIC-0.32□□□□□ -2.46
SCN4AP35499 YWHAEP2-201ENST00000580066 112 ntBASIC-0.32□□□□□ -2.46
SCN4AP35499 Y_RNA.297-201ENST00000364950 91 ntBASIC-0.33□□□□□ -2.46
SCN4AP35499 RNU6-616P-201ENST00000384353 107 ntBASIC-0.33□□□□□ -2.46
SCN4AP35499 MT-TQ-201ENST00000387372 72 ntBASIC-0.33□□□□□ -2.46
SCN4AP35499 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.33□□□□□ -2.46
SCN4AP35499 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.33□□□□□ -2.46
SCN4AP35499 RNY4P6-201ENST00000363667 96 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 MIR577-201ENST00000385196 96 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 RNA5SP67-201ENST00000516422 131 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 RNU6-175P-201ENST00000516896 107 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 MIR3163-201ENST00000581592 73 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 Y_RNA.778-201ENST00000620203 90 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 AP001340.1-201ENST00000624405 217 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 U6.100-201ENST00000636230 99 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 SNORD114-4-201ENST00000363962 75 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 RNA5SP451-201ENST00000410588 110 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 AC109327.2-201ENST00000448339 378 ntBASIC-0.34□□□□□ -2.46
SCN4AP35499 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.34□□□□□ -2.46
SCN4AP35499 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.35□□□□□ -2.47
SCN4AP35499 Y_RNA.213-201ENST00000364178 111 ntBASIC-0.35□□□□□ -2.47
SCN4AP35499 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.35□□□□□ -2.47
SCN4AP35499 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.35□□□□□ -2.47
SCN4AP35499 RNU6-460P-201ENST00000391158 108 ntBASIC-0.35□□□□□ -2.47
SCN4AP35499 RNU6-394P-201ENST00000410735 107 ntBASIC-0.35□□□□□ -2.47
SCN4AP35499 RNU7-6P-201ENST00000516845 62 ntBASIC-0.35□□□□□ -2.47
SCN4AP35499 Y_RNA.155-201ENST00000363632 101 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNU6-409P-201ENST00000384114 104 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 SNORD37.2-201ENST00000391075 66 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 MIR876-201ENST00000401147 81 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNU7-197P-201ENST00000458836 62 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNA5SP484-201ENST00000458857 111 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 MIR2113-201ENST00000459007 91 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.36□□□□□ -2.47
SCN4AP35499 AL391099.1-201ENST00000624635 187 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNU6-957P-201ENST00000363652 99 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 AC074198.2-201ENST00000508153 258 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNU6-320P-201ENST00000516511 106 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 MIR4536-1-201ENST00000583537 88 ntBASIC-0.36□□□□□ -2.47
SCN4AP35499 SNORD49B-201ENST00000365172 72 ntBASIC-0.37□□□□□ -2.47
SCN4AP35499 SNORA25.13-201ENST00000516395 103 ntBASIC-0.37□□□□□ -2.47
SCN4AP35499 MIR4723-201ENST00000585070 81 ntBASIC-0.37□□□□□ -2.47
SCN4AP35499 RNU6-811P-201ENST00000384069 107 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 RNU6-524P-201ENST00000384270 107 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 Y_RNA.580-201ENST00000391004 95 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 MIR3144-201ENST00000579460 79 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 MIR548AG2-201ENST00000581228 64 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 MIR4473-201ENST00000583731 91 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 RNU6-235P-201ENST00000362644 107 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 MIR224-201ENST00000384889 81 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.38□□□□□ -2.47
SCN4AP35499 RNU6-719P-201ENST00000516671 104 ntBASIC-0.38□□□□□ -2.47
SCN4AP35499 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.39□□□□□ -2.47
SCN4AP35499 RNU6-832P-201ENST00000363319 107 ntBASIC-0.39□□□□□ -2.47
SCN4AP35499 SNORD38.1-201ENST00000363863 68 ntBASIC-0.39□□□□□ -2.47
SCN4AP35499 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.39□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 264.5 ms