Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.1□□□□□ -2.75
SDC4P31431 SNORD116-29-201ENST00000384516 83 ntBASIC-2.1□□□□□ -2.75
SDC4P31431 MT-TI-201ENST00000387365 69 ntBASIC-2.1□□□□□ -2.75
SDC4P31431 SNORA33.1-201ENST00000364957 130 ntBASIC-2.11□□□□□ -2.75
SDC4P31431 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.11□□□□□ -2.75
SDC4P31431 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 RNU1-115P-201ENST00000365329 160 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 RNU6-80P-201ENST00000384195 107 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 RNA5SP86-201ENST00000390869 98 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 SNORD75.2-201ENST00000408784 58 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 SNORA7.5-201ENST00000410672 110 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 RPL35AP4-201ENST00000412007 102 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.12□□□□□ -2.75
SDC4P31431 FGF7P4-201ENST00000509595 295 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.12□□□□□ -2.75
SDC4P31431 SNORD115-19-201ENST00000363098 82 ntBASIC-2.13□□□□□ -2.75
SDC4P31431 SNORD115-18-201ENST00000363293 82 ntBASIC-2.13□□□□□ -2.75
SDC4P31431 SNORD115-17-201ENST00000364612 82 ntBASIC-2.13□□□□□ -2.75
SDC4P31431 SNX3P1X-201ENST00000414887 175 ntBASIC-2.13□□□□□ -2.75
SDC4P31431 SNORD2.1-201ENST00000458762 69 ntBASIC-2.13□□□□□ -2.75
SDC4P31431 RNU6-1333P-201ENST00000516162 93 ntBASIC-2.13□□□□□ -2.75
SDC4P31431 RNA5SP147-201ENST00000516493 109 ntBASIC-2.13□□□□□ -2.75
SDC4P31431 MIR4744-201ENST00000581563 82 ntBASIC-2.13□□□□□ -2.75
SDC4P31431 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 MIR548H1-201ENST00000408610 102 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 AC069439.1-201ENST00000494739 167 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 MTND3P22-201ENST00000510932 243 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 RNU6-720P-201ENST00000516363 108 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 CYP3A54P-201ENST00000566950 75 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 AC078883.4-201ENST00000623218 367 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 AL512310.12-203ENST00000640543 90 ntBASIC-2.14□□□□□ -2.75
SDC4P31431 RNU6-103P-201ENST00000363686 107 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 SNORD38.1-201ENST00000363863 68 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 Y_RNA.259-201ENST00000364619 101 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 RNU6-643P-201ENST00000384018 107 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 RNU6-578P-201ENST00000390980 103 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 RNY4P36-201ENST00000391116 96 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.15□□□□□ -2.75
SDC4P31431 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 MIR3974-201ENST00000637126 96 ntBASIC-2.15□□□□□ -2.75
SDC4P31431 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 Y_RNA.51-201ENST00000362725 102 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 Y_RNA.250-201ENST00000364542 110 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 Y_RNA.252-201ENST00000364556 101 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 RNU6-1014P-201ENST00000383940 103 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 MIR548A1-201ENST00000385041 97 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 AC090616.4-201ENST00000448026 115 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 MTND1P29-201ENST00000448112 647 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 snoU13.17-201ENST00000458802 104 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 AC080013.6-201ENST00000606185 215 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 MIR1246-201ENST00000636535 73 ntBASIC-2.16□□□□□ -2.76
SDC4P31431 Y_RNA.26-201ENST00000362539 101 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 RNU6-1313P-201ENST00000362622 102 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 RNU6-806P-201ENST00000365147 105 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 RNU6-132P-201ENST00000383863 107 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 SNORA24B-201ENST00000384176 131 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 SNORD19-201ENST00000391191 68 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 AC107027.2-201ENST00000512197 115 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 AC113139.1-201ENST00000605049 239 ntBASIC-2.17□□□□□ -2.76
SDC4P31431 SNORA63.2-201ENST00000362603 126 ntBASIC-2.18□□□□□ -2.76
SDC4P31431 Y_RNA.188-201ENST00000363952 111 ntBASIC-2.18□□□□□ -2.76
SDC4P31431 RNU6-704P-201ENST00000364162 103 ntBASIC-2.18□□□□□ -2.76
SDC4P31431 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.18□□□□□ -2.76
SDC4P31431 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC-2.18□□□□□ -2.76
SDC4P31431 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-2.18□□□□□ -2.76
SDC4P31431 RNU6-168P-201ENST00000516189 101 ntBASIC-2.18□□□□□ -2.76
SDC4P31431 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.18□□□□□ -2.76
SDC4P31431 Y_RNA.718-201ENST00000517110 102 ntBASIC-2.18□□□□□ -2.76
SDC4P31431 AC002553.4-201ENST00000616896 331 ntBASIC-2.18□□□□□ -2.76
SDC4P31431 RNU6-1177P-201ENST00000391058 104 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 MIR1302-11-201ENST00000408051 138 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 MIR1302-9-201ENST00000408365 138 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 MIR1302-10-201ENST00000408734 138 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.19□□□□□ -2.76
SDC4P31431 RNU6-732P-201ENST00000516033 103 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 Y_RNA.678-201ENST00000516408 96 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 MIR4536-1-201ENST00000583537 88 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 MIR1302-2-201ENST00000607096 138 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 AC021753.1-201ENST00000635724 168 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 MIR5683-201ENST00000636514 76 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 MIR198-201ENST00000637333 62 ntBASIC-2.19□□□□□ -2.76
SDC4P31431 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 RNU6-309P-201ENST00000364573 106 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 Y_RNA.442-201ENST00000384131 102 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 RNU6-540P-201ENST00000384622 101 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 MIR203A-201ENST00000384836 110 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-2.2□□□□□ -2.76
SDC4P31431 MTATP6P21-201ENST00000440681 189 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 MTND5P22-201ENST00000458380 195 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 RNU6-65P-201ENST00000516332 98 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 AL137067.1-201ENST00000615933 120 ntBASIC-2.2□□□□□ -2.76
SDC4P31431 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.21□□□□□ -2.76
SDC4P31431 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.21□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms