Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
VARSP26640 Y_RNA.258-201ENST00000364613 105 ntBASIC2.14□□□□□ -2.07
VARSP26640 U3.27-201ENST00000391237 200 ntBASIC2.14□□□□□ -2.07
VARSP26640 RNA5SP458-201ENST00000516188 119 ntBASIC2.14□□□□□ -2.07
VARSP26640 Y_RNA.676-201ENST00000516393 96 ntBASIC2.14□□□□□ -2.07
VARSP26640 AC023827.1-201ENST00000569247 97 ntBASIC2.14□□□□□ -2.07
VARSP26640 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
VARSP26640 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
VARSP26640 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
VARSP26640 SNORA75.2-201ENST00000391138 150 ntBASIC2.13□□□□□ -2.07
VARSP26640 SNORA75.3-201ENST00000391231 150 ntBASIC2.13□□□□□ -2.07
VARSP26640 MIR1289-2-201ENST00000408360 111 ntBASIC2.13□□□□□ -2.07
VARSP26640 AC244098.3-201ENST00000424803 96 ntBASIC2.13□□□□□ -2.07
VARSP26640 MIR4511-201ENST00000582784 87 ntBASIC2.13□□□□□ -2.07
VARSP26640 AL078603.1-201ENST00000603824 313 ntBASIC2.13□□□□□ -2.07
VARSP26640 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
VARSP26640 SNORD33-201ENST00000362761 85 ntBASIC2.12□□□□□ -2.07
VARSP26640 RNU6-752P-201ENST00000516376 102 ntBASIC2.12□□□□□ -2.07
VARSP26640 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.12□□□□□ -2.07
VARSP26640 AL512310.8-201ENST00000550183 120 ntBASIC2.12□□□□□ -2.07
VARSP26640 AC027335.2-201ENST00000624030 375 ntBASIC2.12□□□□□ -2.07
VARSP26640 AC103706.3-201ENST00000636297 85 ntBASIC2.12□□□□□ -2.07
VARSP26640 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.11□□□□□ -2.07
VARSP26640 MIR938-201ENST00000401216 83 ntBASIC2.11□□□□□ -2.07
VARSP26640 SNORD111-201ENST00000408139 94 ntBASIC2.11□□□□□ -2.07
VARSP26640 AL603825.1-201ENST00000438481 80 ntBASIC2.11□□□□□ -2.07
VARSP26640 AC244505.6-201ENST00000452829 130 ntBASIC2.11□□□□□ -2.07
VARSP26640 RNU7-102P-201ENST00000458948 62 ntBASIC2.11□□□□□ -2.07
VARSP26640 AC106800.4-201ENST00000614905 153 ntBASIC2.11□□□□□ -2.07
VARSP26640 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.11□□□□□ -2.07
VARSP26640 SNORD115-44-201ENST00000365391 82 ntBASIC2.1□□□□□ -2.07
VARSP26640 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
VARSP26640 SNORA48.3-201ENST00000391081 134 ntBASIC2.1□□□□□ -2.07
VARSP26640 AL691482.2-201ENST00000457453 84 ntBASIC2.1□□□□□ -2.07
VARSP26640 AC008834.1-201ENST00000511612 175 ntBASIC2.1□□□□□ -2.07
VARSP26640 RNA5SP200-201ENST00000516360 103 ntBASIC2.1□□□□□ -2.07
VARSP26640 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.1□□□□□ -2.07
VARSP26640 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.09□□□□□ -2.07
VARSP26640 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
VARSP26640 SNORA31.2-201ENST00000516019 134 ntBASIC2.08□□□□□ -2.08
VARSP26640 RNU7-13P-201ENST00000516413 62 ntBASIC2.08□□□□□ -2.08
VARSP26640 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.08□□□□□ -2.08
VARSP26640 MIR5002-201ENST00000584713 97 ntBASIC2.08□□□□□ -2.08
VARSP26640 AL109933.3-201ENST00000619095 188 ntBASIC2.08□□□□□ -2.08
VARSP26640 ZNF355P-201ENST00000427301 3216 ntBASIC2.08□□□□□ -2.08
VARSP26640 MIR764-201ENST00000390811 85 ntBASIC2.07□□□□□ -2.08
VARSP26640 SNORA26.9-201ENST00000391322 122 ntBASIC2.07□□□□□ -2.08
VARSP26640 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VARSP26640 RNA5SP364-201ENST00000516938 78 ntBASIC2.07□□□□□ -2.08
VARSP26640 AC012493.3-201ENST00000604494 112 ntBASIC2.07□□□□□ -2.08
VARSP26640 Y_RNA.363-201ENST00000365529 113 ntBASIC2.06□□□□□ -2.08
VARSP26640 RNU6-982P-201ENST00000516216 102 ntBASIC2.06□□□□□ -2.08
VARSP26640 RN7SKP88-201ENST00000516847 250 ntBASIC2.06□□□□□ -2.08
VARSP26640 7SK.8-201ENST00000612110 250 ntBASIC2.06□□□□□ -2.08
VARSP26640 7SK.11-201ENST00000615477 250 ntBASIC2.06□□□□□ -2.08
VARSP26640 AC069503.3-201ENST00000618674 145 ntBASIC2.06□□□□□ -2.08
VARSP26640 7SK.13-201ENST00000622040 250 ntBASIC2.06□□□□□ -2.08
VARSP26640 SNORA40.6-201ENST00000391153 128 ntBASIC2.05□□□□□ -2.08
VARSP26640 MIR934-201ENST00000401241 83 ntBASIC2.05□□□□□ -2.08
VARSP26640 RNU6-994P-201ENST00000410507 111 ntBASIC2.05□□□□□ -2.08
VARSP26640 AC110620.1-201ENST00000416042 228 ntBASIC2.05□□□□□ -2.08
VARSP26640 RNU6-977P-201ENST00000516411 103 ntBASIC2.05□□□□□ -2.08
VARSP26640 MIR4804-201ENST00000581683 73 ntBASIC2.05□□□□□ -2.08
VARSP26640 AL157834.3-201ENST00000615543 103 ntBASIC2.05□□□□□ -2.08
VARSP26640 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.05□□□□□ -2.08
VARSP26640 RNA5SP160-201ENST00000364866 120 ntBASIC2.04□□□□□ -2.08
VARSP26640 SNORD75.2-201ENST00000408784 58 ntBASIC2.04□□□□□ -2.08
VARSP26640 AL591704.2-201ENST00000421658 181 ntBASIC2.04□□□□□ -2.08
VARSP26640 AC025033.1-201ENST00000463883 194 ntBASIC2.04□□□□□ -2.08
VARSP26640 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.03□□□□□ -2.08
VARSP26640 RNU6-369P-201ENST00000362515 102 ntBASIC2.03□□□□□ -2.08
VARSP26640 SNORD115-24-201ENST00000363528 82 ntBASIC2.03□□□□□ -2.08
VARSP26640 RNU6-1187P-201ENST00000364771 110 ntBASIC2.03□□□□□ -2.08
VARSP26640 RNU1-119P-201ENST00000391122 165 ntBASIC2.03□□□□□ -2.08
VARSP26640 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.03□□□□□ -2.08
VARSP26640 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.03□□□□□ -2.08
VARSP26640 RNA5SP99-201ENST00000364020 114 ntBASIC2.02□□□□□ -2.09
VARSP26640 RNU6-1126P-201ENST00000384002 107 ntBASIC2.02□□□□□ -2.09
VARSP26640 SNORA64-201ENST00000384674 134 ntBASIC2.02□□□□□ -2.09
VARSP26640 MIR100-201ENST00000385259 80 ntBASIC2.02□□□□□ -2.09
VARSP26640 RNU7-56P-201ENST00000458744 62 ntBASIC2.02□□□□□ -2.09
VARSP26640 SNORA31.14-201ENST00000516728 116 ntBASIC2.02□□□□□ -2.09
VARSP26640 RNU1-40P-201ENST00000516816 164 ntBASIC2.02□□□□□ -2.09
VARSP26640 RNU1-97P-201ENST00000516872 164 ntBASIC2.02□□□□□ -2.09
VARSP26640 RNU6-295P-201ENST00000516901 104 ntBASIC2.02□□□□□ -2.09
VARSP26640 MIR548AG2-201ENST00000581228 64 ntBASIC2.02□□□□□ -2.09
VARSP26640 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.02□□□□□ -2.09
VARSP26640 Y_RNA.32-201ENST00000362589 110 ntBASIC2.01□□□□□ -2.09
VARSP26640 MIR633-201ENST00000384821 98 ntBASIC2.01□□□□□ -2.09
VARSP26640 RNU7-21P-201ENST00000459430 62 ntBASIC2.01□□□□□ -2.09
VARSP26640 RNA5SP182-201ENST00000516064 82 ntBASIC2.01□□□□□ -2.09
VARSP26640 NAMPTP3-201ENST00000569273 224 ntBASIC2.01□□□□□ -2.09
VARSP26640 MIR6509-201ENST00000614603 85 ntBASIC2.01□□□□□ -2.09
VARSP26640 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC2□□□□□ -2.09
VARSP26640 RNU6-495P-201ENST00000362995 107 ntBASIC2□□□□□ -2.09
VARSP26640 RNU6-1039P-201ENST00000383931 107 ntBASIC2□□□□□ -2.09
VARSP26640 MIR203A-201ENST00000384836 110 ntBASIC2□□□□□ -2.09
VARSP26640 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2□□□□□ -2.09
VARSP26640 MTND4LP1-201ENST00000446263 157 ntBASIC2□□□□□ -2.09
VARSP26640 Y_RNA.783-201ENST00000613546 102 ntBASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 249.8 ms