Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 Y_RNA.36-201ENST00000362602 112 ntBASIC1.79□□□□□ -2.12
NFKB1P19838 RNU6-587P-201ENST00000391282 106 ntBASIC1.79□□□□□ -2.12
NFKB1P19838 MIR942-201ENST00000401111 86 ntBASIC1.79□□□□□ -2.12
NFKB1P19838 AC244505.6-201ENST00000452829 130 ntBASIC1.79□□□□□ -2.12
NFKB1P19838 RNU7-102P-201ENST00000458948 62 ntBASIC1.79□□□□□ -2.12
NFKB1P19838 RNU6-902P-201ENST00000517212 91 ntBASIC1.79□□□□□ -2.12
NFKB1P19838 MIR3140-201ENST00000583685 90 ntBASIC1.79□□□□□ -2.12
NFKB1P19838 AC008608.1-201ENST00000603910 127 ntBASIC1.79□□□□□ -2.12
NFKB1P19838 RNU6-340P-201ENST00000364005 107 ntBASIC1.78□□□□□ -2.12
NFKB1P19838 Y_RNA.226-201ENST00000364337 114 ntBASIC1.78□□□□□ -2.12
NFKB1P19838 SNORD48-201ENST00000364953 64 ntBASIC1.78□□□□□ -2.12
NFKB1P19838 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.78□□□□□ -2.12
NFKB1P19838 RNU7-90P-201ENST00000459216 62 ntBASIC1.78□□□□□ -2.12
NFKB1P19838 MIR4804-201ENST00000581683 73 ntBASIC1.78□□□□□ -2.12
NFKB1P19838 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.78□□□□□ -2.12
NFKB1P19838 AC084768.2-201ENST00000622736 221 ntBASIC1.78□□□□□ -2.12
NFKB1P19838 ZNF209P-201ENST00000593450 2304 ntBASIC1.78□□□□□ -2.13
NFKB1P19838 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NFKB1P19838 RNU6-910P-201ENST00000390844 107 ntBASIC1.77□□□□□ -2.13
NFKB1P19838 RNU6-994P-201ENST00000410507 111 ntBASIC1.77□□□□□ -2.13
NFKB1P19838 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.77□□□□□ -2.13
NFKB1P19838 SNORD79.1-201ENST00000516069 84 ntBASIC1.77□□□□□ -2.13
NFKB1P19838 MIR6845-201ENST00000613182 61 ntBASIC1.77□□□□□ -2.13
NFKB1P19838 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
NFKB1P19838 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NFKB1P19838 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NFKB1P19838 SNORA24B-201ENST00000384176 131 ntBASIC1.76□□□□□ -2.13
NFKB1P19838 RNU6-154P-201ENST00000384306 106 ntBASIC1.76□□□□□ -2.13
NFKB1P19838 MIR451A-201ENST00000385059 72 ntBASIC1.76□□□□□ -2.13
NFKB1P19838 Y_RNA.606-201ENST00000410579 103 ntBASIC1.76□□□□□ -2.13
NFKB1P19838 Y_RNA.371-201ENST00000365591 113 ntBASIC1.75□□□□□ -2.13
NFKB1P19838 SNORA8.1-201ENST00000384250 140 ntBASIC1.75□□□□□ -2.13
NFKB1P19838 MIR1287-201ENST00000408492 90 ntBASIC1.75□□□□□ -2.13
NFKB1P19838 RNU2-59P-201ENST00000410482 191 ntBASIC1.75□□□□□ -2.13
NFKB1P19838 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.75□□□□□ -2.13
NFKB1P19838 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.75□□□□□ -2.13
NFKB1P19838 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
NFKB1P19838 RNU6-330P-201ENST00000363015 107 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 RNU6-681P-201ENST00000364012 104 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 RNU6-1241P-201ENST00000384536 107 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 RNU7-56P-201ENST00000458744 62 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 AC097510.1-201ENST00000510945 133 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 RNU6-977P-201ENST00000516411 103 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 MIR3122-201ENST00000577243 73 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 MIR4781-201ENST00000585250 76 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 MIR8081-201ENST00000611533 95 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 U6.81-201ENST00000612550 106 ntBASIC1.74□□□□□ -2.13
NFKB1P19838 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.73□□□□□ -2.13
NFKB1P19838 AL359821.1-201ENST00000605519 182 ntBASIC1.73□□□□□ -2.13
NFKB1P19838 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
NFKB1P19838 RNU1-17P-201ENST00000363022 152 ntBASIC1.72□□□□□ -2.13
NFKB1P19838 MIR100-201ENST00000385259 80 ntBASIC1.72□□□□□ -2.13
NFKB1P19838 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
NFKB1P19838 RNU1-119P-201ENST00000391122 165 ntBASIC1.72□□□□□ -2.13
NFKB1P19838 RNU6-1053P-201ENST00000515930 101 ntBASIC1.72□□□□□ -2.13
NFKB1P19838 RNU6-295P-201ENST00000516901 104 ntBASIC1.72□□□□□ -2.13
NFKB1P19838 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.72□□□□□ -2.13
NFKB1P19838 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.71□□□□□ -2.13
NFKB1P19838 SNORD115-44-201ENST00000365391 82 ntBASIC1.71□□□□□ -2.14
NFKB1P19838 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
NFKB1P19838 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.71□□□□□ -2.14
NFKB1P19838 MIR1-1-201ENST00000362147 71 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 Y_RNA.32-201ENST00000362589 110 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 RNU6-824P-201ENST00000363724 104 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 MIR154-201ENST00000385243 84 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 U3.27-201ENST00000391237 200 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 RNU6-1052P-201ENST00000411398 104 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 RNU6-287P-201ENST00000516230 98 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 RNU6-719P-201ENST00000516671 104 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 RNU6-1057P-201ENST00000517162 102 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 uc_338.16-201ENST00000621804 95 ntBASIC1.7□□□□□ -2.14
NFKB1P19838 RNU6-649P-201ENST00000384463 107 ntBASIC1.69□□□□□ -2.14
NFKB1P19838 RNU6-540P-201ENST00000384622 101 ntBASIC1.69□□□□□ -2.14
NFKB1P19838 SNORD12-201ENST00000391002 90 ntBASIC1.69□□□□□ -2.14
NFKB1P19838 AL157834.3-201ENST00000615543 103 ntBASIC1.69□□□□□ -2.14
NFKB1P19838 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NFKB1P19838 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
NFKB1P19838 Y_RNA.174-201ENST00000363781 105 ntBASIC1.68□□□□□ -2.14
NFKB1P19838 MIR520F-201ENST00000384824 87 ntBASIC1.68□□□□□ -2.14
NFKB1P19838 MIR1827-201ENST00000408549 66 ntBASIC1.68□□□□□ -2.14
NFKB1P19838 SNORA31.14-201ENST00000516728 116 ntBASIC1.68□□□□□ -2.14
NFKB1P19838 SNORA70.22-201ENST00000517160 124 ntBASIC1.68□□□□□ -2.14
NFKB1P19838 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NFKB1P19838 SNORD115-31-201ENST00000365318 82 ntBASIC1.67□□□□□ -2.14
NFKB1P19838 AC067940.1-201ENST00000458411 300 ntBASIC1.67□□□□□ -2.14
NFKB1P19838 MIR2113-201ENST00000459007 91 ntBASIC1.67□□□□□ -2.14
NFKB1P19838 RNU7-13P-201ENST00000516413 62 ntBASIC1.67□□□□□ -2.14
NFKB1P19838 MIR3675-201ENST00000583661 73 ntBASIC1.67□□□□□ -2.14
NFKB1P19838 RNA5SP403-201ENST00000363598 108 ntBASIC1.66□□□□□ -2.14
NFKB1P19838 RNA5SP363-201ENST00000365072 115 ntBASIC1.66□□□□□ -2.14
NFKB1P19838 RNU6-1177P-201ENST00000391058 104 ntBASIC1.66□□□□□ -2.14
NFKB1P19838 AC108667.1-201ENST00000428618 249 ntBASIC1.66□□□□□ -2.14
NFKB1P19838 Y_RNA.386-201ENST00000383913 105 ntBASIC1.65□□□□□ -2.15
NFKB1P19838 SNORD30.1-201ENST00000391309 70 ntBASIC1.65□□□□□ -2.15
NFKB1P19838 SNORA26.9-201ENST00000391322 122 ntBASIC1.65□□□□□ -2.15
NFKB1P19838 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.65□□□□□ -2.15
NFKB1P19838 AC125388.1-201ENST00000459631 156 ntBASIC1.65□□□□□ -2.15
NFKB1P19838 SNORA25.15-201ENST00000516487 89 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 193.6 ms