Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 MIR4696-201ENST00000581431 70 ntBASIC1.27□□□□□ -2.21
KRT4P19013 MIR4484-201ENST00000582855 83 ntBASIC1.27□□□□□ -2.21
KRT4P19013 MTRNR2L2-201ENST00000604882 87 ntBASIC1.27□□□□□ -2.21
KRT4P19013 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRT4P19013 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
KRT4P19013 RNU6-364P-201ENST00000384387 107 ntBASIC1.26□□□□□ -2.21
KRT4P19013 MIR599-201ENST00000385069 95 ntBASIC1.26□□□□□ -2.21
KRT4P19013 SNORD90-201ENST00000391145 111 ntBASIC1.26□□□□□ -2.21
KRT4P19013 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
KRT4P19013 AL606490.4-201ENST00000423117 127 ntBASIC1.26□□□□□ -2.21
KRT4P19013 snoU13.17-201ENST00000458802 104 ntBASIC1.26□□□□□ -2.21
KRT4P19013 RNU6-539P-201ENST00000516665 103 ntBASIC1.26□□□□□ -2.21
KRT4P19013 RNU6-1015P-201ENST00000517121 99 ntBASIC1.26□□□□□ -2.21
KRT4P19013 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.26□□□□□ -2.21
KRT4P19013 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
KRT4P19013 Y_RNA.207-201ENST00000364142 106 ntBASIC1.25□□□□□ -2.21
KRT4P19013 MIR4676-201ENST00000583078 72 ntBASIC1.25□□□□□ -2.21
KRT4P19013 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.25□□□□□ -2.21
KRT4P19013 U6.100-201ENST00000636230 99 ntBASIC1.25□□□□□ -2.21
KRT4P19013 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
KRT4P19013 RNU6-681P-201ENST00000364012 104 ntBASIC1.24□□□□□ -2.21
KRT4P19013 RNU6-535P-201ENST00000384722 107 ntBASIC1.24□□□□□ -2.21
KRT4P19013 SNORA67.5-201ENST00000391036 107 ntBASIC1.24□□□□□ -2.21
KRT4P19013 MIR938-201ENST00000401216 83 ntBASIC1.24□□□□□ -2.21
KRT4P19013 RNU6-935P-201ENST00000410371 100 ntBASIC1.24□□□□□ -2.21
KRT4P19013 RNU7-21P-201ENST00000459430 62 ntBASIC1.24□□□□□ -2.21
KRT4P19013 AC027335.2-201ENST00000624030 375 ntBASIC1.24□□□□□ -2.21
KRT4P19013 Y_RNA.36-201ENST00000362602 112 ntBASIC1.23□□□□□ -2.21
KRT4P19013 Y_RNA.363-201ENST00000365529 113 ntBASIC1.23□□□□□ -2.21
KRT4P19013 SNORA80D-201ENST00000384488 135 ntBASIC1.23□□□□□ -2.21
KRT4P19013 RNU6-634P-201ENST00000459134 106 ntBASIC1.23□□□□□ -2.21
KRT4P19013 RNU7-90P-201ENST00000459216 62 ntBASIC1.23□□□□□ -2.21
KRT4P19013 RNU6-1265P-201ENST00000516342 103 ntBASIC1.23□□□□□ -2.21
KRT4P19013 RNU6-687P-201ENST00000516443 89 ntBASIC1.23□□□□□ -2.21
KRT4P19013 AC023827.1-201ENST00000569247 97 ntBASIC1.23□□□□□ -2.21
KRT4P19013 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
KRT4P19013 ZNF209P-201ENST00000593450 2304 ntBASIC1.22□□□□□ -2.21
KRT4P19013 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.22□□□□□ -2.21
KRT4P19013 RNU6-340P-201ENST00000364005 107 ntBASIC1.22□□□□□ -2.21
KRT4P19013 RNU6-291P-201ENST00000384720 107 ntBASIC1.22□□□□□ -2.21
KRT4P19013 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
KRT4P19013 RNU6-587P-201ENST00000391282 106 ntBASIC1.22□□□□□ -2.21
KRT4P19013 MIR942-201ENST00000401111 86 ntBASIC1.22□□□□□ -2.21
KRT4P19013 Y_RNA.606-201ENST00000410579 103 ntBASIC1.22□□□□□ -2.21
KRT4P19013 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.22□□□□□ -2.21
KRT4P19013 AC244505.6-201ENST00000452829 130 ntBASIC1.22□□□□□ -2.21
KRT4P19013 AC008608.1-201ENST00000603910 127 ntBASIC1.22□□□□□ -2.21
KRT4P19013 MIR6715A-201ENST00000615929 79 ntBASIC1.22□□□□□ -2.21
KRT4P19013 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
KRT4P19013 SNORA8.1-201ENST00000384250 140 ntBASIC1.21□□□□□ -2.22
KRT4P19013 MIR618-201ENST00000385287 98 ntBASIC1.21□□□□□ -2.22
KRT4P19013 RNU2-59P-201ENST00000410482 191 ntBASIC1.21□□□□□ -2.22
KRT4P19013 RNU6-994P-201ENST00000410507 111 ntBASIC1.21□□□□□ -2.22
KRT4P19013 snoU13.23-201ENST00000458863 104 ntBASIC1.21□□□□□ -2.22
KRT4P19013 RNU7-102P-201ENST00000458948 62 ntBASIC1.21□□□□□ -2.22
KRT4P19013 AC097510.1-201ENST00000510945 133 ntBASIC1.21□□□□□ -2.22
KRT4P19013 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
KRT4P19013 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.21□□□□□ -2.22
KRT4P19013 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
KRT4P19013 SNORD115-44-201ENST00000365391 82 ntBASIC1.2□□□□□ -2.22
KRT4P19013 Y_RNA.371-201ENST00000365591 113 ntBASIC1.2□□□□□ -2.22
KRT4P19013 SNORA25-201ENST00000384384 134 ntBASIC1.2□□□□□ -2.22
KRT4P19013 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
KRT4P19013 RNU6-910P-201ENST00000390844 107 ntBASIC1.2□□□□□ -2.22
KRT4P19013 MIR1289-2-201ENST00000408360 111 ntBASIC1.2□□□□□ -2.22
KRT4P19013 RNU6-977P-201ENST00000516411 103 ntBASIC1.2□□□□□ -2.22
KRT4P19013 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
KRT4P19013 RNU6-1057P-201ENST00000517162 102 ntBASIC1.2□□□□□ -2.22
KRT4P19013 MIR4804-201ENST00000581683 73 ntBASIC1.2□□□□□ -2.22
KRT4P19013 MIR3140-201ENST00000583685 90 ntBASIC1.2□□□□□ -2.22
KRT4P19013 AL359821.1-201ENST00000605519 182 ntBASIC1.2□□□□□ -2.22
KRT4P19013 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRT4P19013 RNU6-369P-201ENST00000362515 102 ntBASIC1.19□□□□□ -2.22
KRT4P19013 RNA5SP245-201ENST00000364239 121 ntBASIC1.19□□□□□ -2.22
KRT4P19013 RNU6-154P-201ENST00000384306 106 ntBASIC1.19□□□□□ -2.22
KRT4P19013 MIR451A-201ENST00000385059 72 ntBASIC1.19□□□□□ -2.22
KRT4P19013 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
KRT4P19013 RNU1-119P-201ENST00000391122 165 ntBASIC1.19□□□□□ -2.22
KRT4P19013 U3.27-201ENST00000391237 200 ntBASIC1.19□□□□□ -2.22
KRT4P19013 MIR1285-1-201ENST00000408593 84 ntBASIC1.19□□□□□ -2.22
KRT4P19013 RNU7-56P-201ENST00000458744 62 ntBASIC1.19□□□□□ -2.22
KRT4P19013 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
KRT4P19013 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.19□□□□□ -2.22
KRT4P19013 RNU6-237P-201ENST00000515985 71 ntBASIC1.19□□□□□ -2.22
KRT4P19013 SNORD79.1-201ENST00000516069 84 ntBASIC1.19□□□□□ -2.22
KRT4P19013 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
KRT4P19013 MIR4303-201ENST00000581299 66 ntBASIC1.19□□□□□ -2.22
KRT4P19013 MIR664A-201ENST00000626086 82 ntBASIC1.19□□□□□ -2.22
KRT4P19013 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
KRT4P19013 MIR1-1-201ENST00000362147 71 ntBASIC1.18□□□□□ -2.22
KRT4P19013 SNORA24B-201ENST00000384176 131 ntBASIC1.18□□□□□ -2.22
KRT4P19013 RNU6-649P-201ENST00000384463 107 ntBASIC1.18□□□□□ -2.22
KRT4P19013 RNU6-1241P-201ENST00000384536 107 ntBASIC1.18□□□□□ -2.22
KRT4P19013 MIR154-201ENST00000385243 84 ntBASIC1.18□□□□□ -2.22
KRT4P19013 MIR100-201ENST00000385259 80 ntBASIC1.18□□□□□ -2.22
KRT4P19013 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.18□□□□□ -2.22
KRT4P19013 Y_RNA.174-201ENST00000363781 105 ntBASIC1.17□□□□□ -2.22
KRT4P19013 SNORD12-201ENST00000391002 90 ntBASIC1.17□□□□□ -2.22
KRT4P19013 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.17□□□□□ -2.22
KRT4P19013 MIR4524B-201ENST00000581569 115 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms