Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 RNA5SP163-201ENST00000410304 99 ntBASIC-0.16□□□□□ -2.44
ERCC2P18074 MTND4LP9-201ENST00000427694 174 ntBASIC-0.16□□□□□ -2.44
ERCC2P18074 AL353813.1-201ENST00000440700 253 ntBASIC-0.16□□□□□ -2.44
ERCC2P18074 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.16□□□□□ -2.44
ERCC2P18074 RNU7-200P-201ENST00000516105 62 ntBASIC-0.16□□□□□ -2.44
ERCC2P18074 SCARNA11.2-201ENST00000517183 154 ntBASIC-0.16□□□□□ -2.44
ERCC2P18074 MIR548AG2-201ENST00000581228 64 ntBASIC-0.16□□□□□ -2.44
ERCC2P18074 RNU6-90P-201ENST00000606352 106 ntBASIC-0.16□□□□□ -2.44
ERCC2P18074 MTND5P18-201ENST00000445624 1801 ntBASIC-0.17□□□□□ -2.44
ERCC2P18074 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.17□□□□□ -2.44
ERCC2P18074 SNORD38.1-201ENST00000363863 68 ntBASIC-0.17□□□□□ -2.44
ERCC2P18074 SNORD115-44-201ENST00000365391 82 ntBASIC-0.17□□□□□ -2.44
ERCC2P18074 RNU6-756P-201ENST00000383997 107 ntBASIC-0.17□□□□□ -2.44
ERCC2P18074 RNU6-409P-201ENST00000384114 104 ntBASIC-0.17□□□□□ -2.44
ERCC2P18074 MIR548G-201ENST00000408442 89 ntBASIC-0.17□□□□□ -2.44
ERCC2P18074 RNU1-141P-201ENST00000364623 158 ntBASIC-0.18□□□□□ -2.44
ERCC2P18074 Y_RNA.464-201ENST00000384282 110 ntBASIC-0.18□□□□□ -2.44
ERCC2P18074 RNU6-243P-201ENST00000391140 107 ntBASIC-0.18□□□□□ -2.44
ERCC2P18074 RNU7-165P-201ENST00000458864 60 ntBASIC-0.18□□□□□ -2.44
ERCC2P18074 RNU6-1018P-201ENST00000516577 106 ntBASIC-0.18□□□□□ -2.44
ERCC2P18074 RNU6-794P-201ENST00000517261 64 ntBASIC-0.18□□□□□ -2.44
ERCC2P18074 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.19□□□□□ -2.44
ERCC2P18074 SNORD36A-201ENST00000362874 73 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 Y_RNA.180-201ENST00000363867 113 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 MIR617-201ENST00000385030 97 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 MIR519E-201ENST00000385075 84 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 RNU6-816P-201ENST00000390914 107 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 SNORA75.1-201ENST00000391130 148 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 RNU6-1268P-201ENST00000391214 107 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 RNU6-1239P-201ENST00000391310 107 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 AL161932.1-201ENST00000437408 146 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 SNORA25.13-201ENST00000516395 103 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 AC084368.1-201ENST00000620935 65 ntBASIC-0.19□□□□□ -2.44
ERCC2P18074 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.2□□□□□ -2.44
ERCC2P18074 Y_RNA.343-201ENST00000365354 112 ntBASIC-0.2□□□□□ -2.44
ERCC2P18074 SNORA40-201ENST00000388090 126 ntBASIC-0.2□□□□□ -2.44
ERCC2P18074 TRDV1-202ENST00000621643 102 ntBASIC-0.2□□□□□ -2.44
ERCC2P18074 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.21□□□□□ -2.44
ERCC2P18074 Y_RNA.173-201ENST00000363776 113 ntBASIC-0.21□□□□□ -2.44
ERCC2P18074 RNU6-1201P-201ENST00000384227 107 ntBASIC-0.21□□□□□ -2.44
ERCC2P18074 Y_RNA.630-201ENST00000411370 108 ntBASIC-0.21□□□□□ -2.44
ERCC2P18074 MIR2113-201ENST00000459007 91 ntBASIC-0.21□□□□□ -2.44
ERCC2P18074 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-0.21□□□□□ -2.44
ERCC2P18074 RNU6-772P-201ENST00000516042 105 ntBASIC-0.21□□□□□ -2.44
ERCC2P18074 RNU6-180P-201ENST00000516697 61 ntBASIC-0.21□□□□□ -2.44
ERCC2P18074 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.21□□□□□ -2.44
ERCC2P18074 SNORA32.1-201ENST00000364514 115 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 Y_RNA.346-201ENST00000365385 112 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 MIR516B1-201ENST00000385211 90 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 RNU6-257P-201ENST00000410238 98 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 RNU6-346P-201ENST00000516288 111 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 RNU6-255P-201ENST00000516957 105 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 RNU6-1212P-201ENST00000517023 104 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 MIR4473-201ENST00000583731 91 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC-0.22□□□□□ -2.44
ERCC2P18074 AL442128.1-201ENST00000615151 90 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 MIR6514-201ENST00000622549 70 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 AL162726.3-218ENST00000636401 95 ntBASIC-0.22□□□□□ -2.44
ERCC2P18074 RNU6V-201ENST00000384105 107 ntBASIC-0.23□□□□□ -2.45
ERCC2P18074 SNORA51.5-201ENST00000384126 131 ntBASIC-0.23□□□□□ -2.45
ERCC2P18074 AC093423.1-201ENST00000440817 142 ntBASIC-0.23□□□□□ -2.45
ERCC2P18074 RNU6-1211P-201ENST00000459179 105 ntBASIC-0.23□□□□□ -2.45
ERCC2P18074 RNU6-287P-201ENST00000516230 98 ntBASIC-0.23□□□□□ -2.45
ERCC2P18074 U6.100-201ENST00000636230 99 ntBASIC-0.23□□□□□ -2.45
ERCC2P18074 MIR329-2-201ENST00000385029 84 ntBASIC-0.24□□□□□ -2.45
ERCC2P18074 MIR876-201ENST00000401147 81 ntBASIC-0.24□□□□□ -2.45
ERCC2P18074 MIR1912-201ENST00000410389 80 ntBASIC-0.24□□□□□ -2.45
ERCC2P18074 AC104692.1-201ENST00000472406 90 ntBASIC-0.24□□□□□ -2.45
ERCC2P18074 YWHAEP2-201ENST00000580066 112 ntBASIC-0.24□□□□□ -2.45
ERCC2P18074 AC069503.3-201ENST00000618674 145 ntBASIC-0.24□□□□□ -2.45
ERCC2P18074 MIR1295B-201ENST00000636144 60 ntBASIC-0.24□□□□□ -2.45
ERCC2P18074 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.24□□□□□ -2.45
ERCC2P18074 RNU6-957P-201ENST00000363652 99 ntBASIC-0.25□□□□□ -2.45
ERCC2P18074 Y_RNA.506-201ENST00000384494 102 ntBASIC-0.25□□□□□ -2.45
ERCC2P18074 Y_RNA.596-201ENST00000410462 109 ntBASIC-0.25□□□□□ -2.45
ERCC2P18074 MIR4460-201ENST00000577862 86 ntBASIC-0.25□□□□□ -2.45
ERCC2P18074 AL157777.2-201ENST00000258070 137 ntBASIC-0.26□□□□□ -2.45
ERCC2P18074 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.26□□□□□ -2.45
ERCC2P18074 MIR106A-201ENST00000384870 81 ntBASIC-0.26□□□□□ -2.45
ERCC2P18074 CR383656.4-201ENST00000546909 122 ntBASIC-0.26□□□□□ -2.45
ERCC2P18074 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.26□□□□□ -2.45
ERCC2P18074 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-0.26□□□□□ -2.45
ERCC2P18074 RNU6-302P-201ENST00000365249 107 ntBASIC-0.27□□□□□ -2.45
ERCC2P18074 MIR539-201ENST00000365690 78 ntBASIC-0.27□□□□□ -2.45
ERCC2P18074 RNY1P5-201ENST00000383890 115 ntBASIC-0.27□□□□□ -2.45
ERCC2P18074 RNU7-107P-201ENST00000459121 61 ntBASIC-0.27□□□□□ -2.45
ERCC2P18074 RNA5SP285-201ENST00000516619 119 ntBASIC-0.27□□□□□ -2.45
ERCC2P18074 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.27□□□□□ -2.45
ERCC2P18074 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.28□□□□□ -2.45
ERCC2P18074 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.28□□□□□ -2.45
ERCC2P18074 RNU6-971P-201ENST00000516920 106 ntBASIC-0.28□□□□□ -2.45
ERCC2P18074 AC096720.1-201ENST00000604441 183 ntBASIC-0.28□□□□□ -2.45
ERCC2P18074 uc_338.10-201ENST00000621872 182 ntBASIC-0.28□□□□□ -2.45
ERCC2P18074 AL035470.1-201ENST00000622571 220 ntBASIC-0.28□□□□□ -2.45
ERCC2P18074 Y_RNA.309-201ENST00000365046 111 ntBASIC-0.29□□□□□ -2.46
ERCC2P18074 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.29□□□□□ -2.46
ERCC2P18074 Y_RNA.525-201ENST00000384570 113 ntBASIC-0.29□□□□□ -2.46
ERCC2P18074 MIR181B2-201ENST00000385004 89 ntBASIC-0.29□□□□□ -2.46
ERCC2P18074 MIR577-201ENST00000385196 96 ntBASIC-0.29□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 169.6 ms