Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 RNU6-364P-201ENST00000384387 107 ntBASIC1.86□□□□□ -2.11
NID1P14543 SNORD116-24-201ENST00000384549 92 ntBASIC1.86□□□□□ -2.11
NID1P14543 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
NID1P14543 RNA5SP338-201ENST00000410495 85 ntBASIC1.86□□□□□ -2.11
NID1P14543 RNU6-295P-201ENST00000516901 104 ntBASIC1.86□□□□□ -2.11
NID1P14543 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.86□□□□□ -2.11
NID1P14543 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NID1P14543 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NID1P14543 RNU6-382P-201ENST00000365181 106 ntBASIC1.85□□□□□ -2.11
NID1P14543 AC244098.3-201ENST00000424803 96 ntBASIC1.85□□□□□ -2.11
NID1P14543 RNU6-287P-201ENST00000516230 98 ntBASIC1.85□□□□□ -2.11
NID1P14543 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.85□□□□□ -2.11
NID1P14543 AC008608.1-201ENST00000603910 127 ntBASIC1.85□□□□□ -2.11
NID1P14543 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
NID1P14543 SNORD111-201ENST00000408139 94 ntBASIC1.84□□□□□ -2.11
NID1P14543 RPS26P5-201ENST00000418544 335 ntBASIC1.84□□□□□ -2.11
NID1P14543 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
NID1P14543 AC244505.6-201ENST00000452829 130 ntBASIC1.84□□□□□ -2.11
NID1P14543 MIR4299-201ENST00000577899 72 ntBASIC1.84□□□□□ -2.11
NID1P14543 MIR4676-201ENST00000583078 72 ntBASIC1.84□□□□□ -2.11
NID1P14543 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
NID1P14543 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
NID1P14543 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.83□□□□□ -2.12
NID1P14543 RNU1-17P-201ENST00000363022 152 ntBASIC1.83□□□□□ -2.12
NID1P14543 MIR30A-201ENST00000385092 71 ntBASIC1.83□□□□□ -2.12
NID1P14543 MIR938-201ENST00000401216 83 ntBASIC1.83□□□□□ -2.12
NID1P14543 SNORA44.1-201ENST00000517031 108 ntBASIC1.83□□□□□ -2.12
NID1P14543 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
NID1P14543 AL078603.1-201ENST00000603824 313 ntBASIC1.83□□□□□ -2.12
NID1P14543 AC103810.8-201ENST00000607347 118 ntBASIC1.83□□□□□ -2.12
NID1P14543 Y_RNA.783-201ENST00000613546 102 ntBASIC1.83□□□□□ -2.12
NID1P14543 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
NID1P14543 Y_RNA.258-201ENST00000364613 105 ntBASIC1.82□□□□□ -2.12
NID1P14543 RNU7-40P-201ENST00000516397 64 ntBASIC1.82□□□□□ -2.12
NID1P14543 AC106800.4-201ENST00000614905 153 ntBASIC1.82□□□□□ -2.12
NID1P14543 AC027335.2-201ENST00000624030 375 ntBASIC1.82□□□□□ -2.12
NID1P14543 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.82□□□□□ -2.12
NID1P14543 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
NID1P14543 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
NID1P14543 SNORA75.2-201ENST00000391138 150 ntBASIC1.81□□□□□ -2.12
NID1P14543 SNORA75.3-201ENST00000391231 150 ntBASIC1.81□□□□□ -2.12
NID1P14543 AL691482.2-201ENST00000457453 84 ntBASIC1.81□□□□□ -2.12
NID1P14543 AC048334.1-201ENST00000477975 159 ntBASIC1.81□□□□□ -2.12
NID1P14543 AL512310.8-201ENST00000550183 120 ntBASIC1.81□□□□□ -2.12
NID1P14543 MIR6845-201ENST00000613182 61 ntBASIC1.81□□□□□ -2.12
NID1P14543 AC069503.3-201ENST00000618674 145 ntBASIC1.81□□□□□ -2.12
NID1P14543 MIR7111-201ENST00000619751 72 ntBASIC1.81□□□□□ -2.12
NID1P14543 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.8□□□□□ -2.12
NID1P14543 RNU7-102P-201ENST00000458948 62 ntBASIC1.8□□□□□ -2.12
NID1P14543 RNU7-13P-201ENST00000516413 62 ntBASIC1.8□□□□□ -2.12
NID1P14543 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.8□□□□□ -2.12
NID1P14543 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
NID1P14543 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
NID1P14543 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.79□□□□□ -2.12
NID1P14543 RNU6-669P-201ENST00000365575 107 ntBASIC1.79□□□□□ -2.12
NID1P14543 AC110620.1-201ENST00000416042 228 ntBASIC1.79□□□□□ -2.12
NID1P14543 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.79□□□□□ -2.12
NID1P14543 RNA5SP364-201ENST00000516938 78 ntBASIC1.79□□□□□ -2.12
NID1P14543 AC023827.1-201ENST00000569247 97 ntBASIC1.79□□□□□ -2.12
NID1P14543 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.78□□□□□ -2.12
NID1P14543 MIR583-201ENST00000384846 75 ntBASIC1.78□□□□□ -2.12
NID1P14543 MIR216B-201ENST00000390186 82 ntBASIC1.78□□□□□ -2.12
NID1P14543 MIR676-201ENST00000390702 67 ntBASIC1.78□□□□□ -2.12
NID1P14543 SNORA40.6-201ENST00000391153 128 ntBASIC1.78□□□□□ -2.12
NID1P14543 SNORD75.2-201ENST00000408784 58 ntBASIC1.78□□□□□ -2.12
NID1P14543 SNORA31.2-201ENST00000516019 134 ntBASIC1.78□□□□□ -2.12
NID1P14543 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.78□□□□□ -2.12
NID1P14543 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.77□□□□□ -2.13
NID1P14543 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NID1P14543 Y_RNA.226-201ENST00000364337 114 ntBASIC1.77□□□□□ -2.13
NID1P14543 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
NID1P14543 RN7SKP88-201ENST00000516847 250 ntBASIC1.77□□□□□ -2.13
NID1P14543 7SK.8-201ENST00000612110 250 ntBASIC1.77□□□□□ -2.13
NID1P14543 7SK.11-201ENST00000615477 250 ntBASIC1.77□□□□□ -2.13
NID1P14543 7SK.13-201ENST00000622040 250 ntBASIC1.77□□□□□ -2.13
NID1P14543 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.77□□□□□ -2.13
NID1P14543 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
NID1P14543 RNU1-119P-201ENST00000391122 165 ntBASIC1.76□□□□□ -2.13
NID1P14543 SUMO2P12-201ENST00000405924 140 ntBASIC1.76□□□□□ -2.13
NID1P14543 RNU6-994P-201ENST00000410507 111 ntBASIC1.76□□□□□ -2.13
NID1P14543 AL591704.2-201ENST00000421658 181 ntBASIC1.76□□□□□ -2.13
NID1P14543 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.76□□□□□ -2.13
NID1P14543 MTND4LP1-201ENST00000446263 157 ntBASIC1.76□□□□□ -2.13
NID1P14543 RNU7-24P-201ENST00000458867 62 ntBASIC1.76□□□□□ -2.13
NID1P14543 RNU6-1053P-201ENST00000515930 101 ntBASIC1.76□□□□□ -2.13
NID1P14543 RNU6-977P-201ENST00000516411 103 ntBASIC1.76□□□□□ -2.13
NID1P14543 AL109933.3-201ENST00000619095 188 ntBASIC1.76□□□□□ -2.13
NID1P14543 RNU6-1187P-201ENST00000364771 110 ntBASIC1.75□□□□□ -2.13
NID1P14543 SNORA26.9-201ENST00000391322 122 ntBASIC1.75□□□□□ -2.13
NID1P14543 AC108667.1-201ENST00000428618 249 ntBASIC1.75□□□□□ -2.13
NID1P14543 RNU6-982P-201ENST00000516216 102 ntBASIC1.75□□□□□ -2.13
NID1P14543 MIR4804-201ENST00000581683 73 ntBASIC1.75□□□□□ -2.13
NID1P14543 MIR4781-201ENST00000585250 76 ntBASIC1.75□□□□□ -2.13
NID1P14543 RNU6-1126P-201ENST00000384002 107 ntBASIC1.74□□□□□ -2.13
NID1P14543 RNU6-141P-201ENST00000410499 105 ntBASIC1.74□□□□□ -2.13
NID1P14543 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.74□□□□□ -2.13
NID1P14543 HMGN2P19-201ENST00000425149 265 ntBASIC1.74□□□□□ -2.13
NID1P14543 RNU6-495P-201ENST00000362995 107 ntBASIC1.73□□□□□ -2.13
NID1P14543 SNORD115-24-201ENST00000363528 82 ntBASIC1.73□□□□□ -2.13
NID1P14543 RNA5SP403-201ENST00000363598 108 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms