Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.679-201ENST00000516416 91 ntBASIC-2□□□□□ -2.73
APOEP02649 RNU6-935P-201ENST00000410371 100 ntBASIC-2.01□□□□□ -2.73
APOEP02649 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.01□□□□□ -2.73
APOEP02649 Y_RNA.318-201ENST00000365131 97 ntBASIC-2.02□□□□□ -2.73
APOEP02649 Y_RNA.326-201ENST00000365176 113 ntBASIC-2.02□□□□□ -2.73
APOEP02649 RNU6-337P-201ENST00000391243 106 ntBASIC-2.02□□□□□ -2.73
APOEP02649 FGF7P6-202ENST00000451282 293 ntBASIC-2.02□□□□□ -2.73
APOEP02649 RNA5SP461-201ENST00000516451 104 ntBASIC-2.02□□□□□ -2.73
APOEP02649 RNU6-235P-201ENST00000362644 107 ntBASIC-2.03□□□□□ -2.73
APOEP02649 AP002392.1-201ENST00000537692 208 ntBASIC-2.03□□□□□ -2.73
APOEP02649 MIR4282-201ENST00000583613 67 ntBASIC-2.03□□□□□ -2.73
APOEP02649 RNU6-588P-201ENST00000410281 105 ntBASIC-2.04□□□□□ -2.74
APOEP02649 MTATP6P21-201ENST00000440681 189 ntBASIC-2.04□□□□□ -2.74
APOEP02649 Y_RNA.677-201ENST00000516401 85 ntBASIC-2.04□□□□□ -2.74
APOEP02649 RNY4P20-201ENST00000516678 93 ntBASIC-2.04□□□□□ -2.74
APOEP02649 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.05□□□□□ -2.74
APOEP02649 RNU6-1082P-201ENST00000364574 107 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.262-201ENST00000364641 102 ntBASIC-2.05□□□□□ -2.74
APOEP02649 MIR451A-201ENST00000385059 72 ntBASIC-2.05□□□□□ -2.74
APOEP02649 RNU6-466P-201ENST00000391224 103 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.797-201ENST00000515977 94 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.05□□□□□ -2.74
APOEP02649 Y_RNA.579-201ENST00000390939 94 ntBASIC-2.06□□□□□ -2.74
APOEP02649 AC113618.1-201ENST00000416747 285 ntBASIC-2.06□□□□□ -2.74
APOEP02649 MTND3P22-201ENST00000510932 243 ntBASIC-2.06□□□□□ -2.74
APOEP02649 MIR4770-201ENST00000579149 58 ntBASIC-2.06□□□□□ -2.74
APOEP02649 MIR6129-201ENST00000616087 109 ntBASIC-2.06□□□□□ -2.74
APOEP02649 MIR198-201ENST00000637333 62 ntBASIC-2.06□□□□□ -2.74
APOEP02649 Y_RNA.70-201ENST00000362886 110 ntBASIC-2.07□□□□□ -2.74
APOEP02649 RNU6-226P-201ENST00000363778 107 ntBASIC-2.07□□□□□ -2.74
APOEP02649 Y_RNA.244-201ENST00000364484 109 ntBASIC-2.07□□□□□ -2.74
APOEP02649 RNU7-6P-201ENST00000516845 62 ntBASIC-2.07□□□□□ -2.74
APOEP02649 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.07□□□□□ -2.74
APOEP02649 Y_RNA.721-201ENST00000517207 102 ntBASIC-2.07□□□□□ -2.74
APOEP02649 U2.14-201ENST00000615943 113 ntBASIC-2.07□□□□□ -2.74
APOEP02649 AC090971.5-201ENST00000621102 293 ntBASIC-2.07□□□□□ -2.74
APOEP02649 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-2.07□□□□□ -2.74
APOEP02649 RNU6-508P-201ENST00000363231 103 ntBASIC-2.08□□□□□ -2.74
APOEP02649 Y_RNA.210-201ENST00000364161 110 ntBASIC-2.08□□□□□ -2.74
APOEP02649 Y_RNA.276-201ENST00000364732 109 ntBASIC-2.08□□□□□ -2.74
APOEP02649 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.08□□□□□ -2.74
APOEP02649 FGF7P4-201ENST00000509595 295 ntBASIC-2.08□□□□□ -2.74
APOEP02649 Y_RNA.114-201ENST00000363265 113 ntBASIC-2.09□□□□□ -2.74
APOEP02649 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.09□□□□□ -2.74
APOEP02649 SNORA63.6-201ENST00000364921 119 ntBASIC-2.09□□□□□ -2.74
APOEP02649 SNORA62.4-201ENST00000365504 151 ntBASIC-2.09□□□□□ -2.74
APOEP02649 MIR889-201ENST00000401280 79 ntBASIC-2.09□□□□□ -2.74
APOEP02649 Y_RNA.651-201ENST00000459380 103 ntBASIC-2.09□□□□□ -2.74
APOEP02649 Y_RNA.700-201ENST00000516806 100 ntBASIC-2.09□□□□□ -2.74
APOEP02649 Y_RNA.468-201ENST00000384298 102 ntBASIC-2.1□□□□□ -2.75
APOEP02649 MIR527-201ENST00000385244 85 ntBASIC-2.1□□□□□ -2.75
APOEP02649 RNU6-1143P-201ENST00000516125 104 ntBASIC-2.1□□□□□ -2.75
APOEP02649 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.1□□□□□ -2.75
APOEP02649 MIR4520-1-201ENST00000582609 70 ntBASIC-2.1□□□□□ -2.75
APOEP02649 Y_RNA.128-201ENST00000363391 112 ntBASIC-2.11□□□□□ -2.75
APOEP02649 Y_RNA.237-201ENST00000364439 102 ntBASIC-2.11□□□□□ -2.75
APOEP02649 RNU6-818P-201ENST00000364837 108 ntBASIC-2.11□□□□□ -2.75
APOEP02649 RNY3P16-201ENST00000516338 101 ntBASIC-2.11□□□□□ -2.75
APOEP02649 RNU6-90P-201ENST00000606352 106 ntBASIC-2.11□□□□□ -2.75
APOEP02649 RNU6-208P-201ENST00000362431 107 ntBASIC-2.12□□□□□ -2.75
APOEP02649 RNU6-768P-201ENST00000384683 107 ntBASIC-2.12□□□□□ -2.75
APOEP02649 RNU6-1246P-201ENST00000391064 107 ntBASIC-2.12□□□□□ -2.75
APOEP02649 U3.27-201ENST00000391237 200 ntBASIC-2.12□□□□□ -2.75
APOEP02649 MIR548G-201ENST00000408442 89 ntBASIC-2.12□□□□□ -2.75
APOEP02649 Z83846.1-201ENST00000446798 265 ntBASIC-2.12□□□□□ -2.75
APOEP02649 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.12□□□□□ -2.75
APOEP02649 Y_RNA.58-201ENST00000362807 102 ntBASIC-2.13□□□□□ -2.75
APOEP02649 SNORD115-19-201ENST00000363098 82 ntBASIC-2.13□□□□□ -2.75
APOEP02649 SNORD115-18-201ENST00000363293 82 ntBASIC-2.13□□□□□ -2.75
APOEP02649 SNORD115-17-201ENST00000364612 82 ntBASIC-2.13□□□□□ -2.75
APOEP02649 RNY3P1-201ENST00000365085 102 ntBASIC-2.13□□□□□ -2.75
APOEP02649 Y_RNA.497-201ENST00000384447 98 ntBASIC-2.13□□□□□ -2.75
APOEP02649 SNORD116-4-201ENST00000384733 96 ntBASIC-2.13□□□□□ -2.75
APOEP02649 MIR1255B1-201ENST00000636325 63 ntBASIC-2.13□□□□□ -2.75
APOEP02649 RNU6-1216P-201ENST00000362590 107 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNU6-647P-201ENST00000364243 107 ntBASIC-2.14□□□□□ -2.75
APOEP02649 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNU6-576P-201ENST00000390854 102 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNA5SP180-201ENST00000516181 101 ntBASIC-2.14□□□□□ -2.75
APOEP02649 RNU6-719P-201ENST00000516671 104 ntBASIC-2.14□□□□□ -2.75
APOEP02649 Y_RNA.182-201ENST00000363880 111 ntBASIC-2.15□□□□□ -2.75
APOEP02649 MIR29B1-201ENST00000385015 81 ntBASIC-2.15□□□□□ -2.75
APOEP02649 Y_RNA.584-201ENST00000391090 114 ntBASIC-2.15□□□□□ -2.75
APOEP02649 YWHAEP3-201ENST00000582767 121 ntBASIC-2.15□□□□□ -2.75
APOEP02649 AL137067.1-201ENST00000615933 120 ntBASIC-2.15□□□□□ -2.75
APOEP02649 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.16□□□□□ -2.76
APOEP02649 Y_RNA.308-201ENST00000365043 101 ntBASIC-2.16□□□□□ -2.76
APOEP02649 Y_RNA.395-201ENST00000383945 109 ntBASIC-2.16□□□□□ -2.76
APOEP02649 MIR601-201ENST00000385256 79 ntBASIC-2.16□□□□□ -2.76
APOEP02649 MT-TI-201ENST00000387365 69 ntBASIC-2.16□□□□□ -2.76
APOEP02649 RNU6-493P-201ENST00000391321 108 ntBASIC-2.16□□□□□ -2.76
APOEP02649 SNORA7.5-201ENST00000410672 110 ntBASIC-2.16□□□□□ -2.76
APOEP02649 MIR4464-201ENST00000580818 92 ntBASIC-2.16□□□□□ -2.76
APOEP02649 MIR1246-201ENST00000636535 73 ntBASIC-2.16□□□□□ -2.76
APOEP02649 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.17□□□□□ -2.76
APOEP02649 RNU6-309P-201ENST00000364573 106 ntBASIC-2.17□□□□□ -2.76
APOEP02649 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.17□□□□□ -2.76
APOEP02649 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.17□□□□□ -2.76
Retrieved 100 of 98,524 protein–RNA pairs in 251.7 ms