Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-509P-201ENST00000363519 107 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNA5SP457-201ENST00000363657 124 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNU6-934P-201ENST00000365154 107 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNU6-1276P-201ENST00000365372 104 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR516A2-201ENST00000384888 90 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR516A1-201ENST00000385033 90 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNU7-85P-201ENST00000458851 63 ntBASIC0.9□□□□□ -2.27
LDLRP01130 AP003327.1-201ENST00000529684 127 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR1273G-201ENST00000577677 100 ntBASIC0.9□□□□□ -2.27
LDLRP01130 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
LDLRP01130 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR548BB-201ENST00000626714 66 ntBASIC0.9□□□□□ -2.27
LDLRP01130 AC006160.2-201ENST00000637708 154 ntBASIC0.9□□□□□ -2.27
LDLRP01130 Y_RNA.13-201ENST00000362403 112 ntBASIC0.89□□□□□ -2.27
LDLRP01130 Y_RNA.57-201ENST00000362806 113 ntBASIC0.89□□□□□ -2.27
LDLRP01130 RNU6-403P-201ENST00000363163 104 ntBASIC0.89□□□□□ -2.27
LDLRP01130 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
LDLRP01130 SNORD78.1-201ENST00000390866 65 ntBASIC0.89□□□□□ -2.27
LDLRP01130 SNORD89-201ENST00000390981 114 ntBASIC0.89□□□□□ -2.27
LDLRP01130 AL161932.1-201ENST00000437408 146 ntBASIC0.89□□□□□ -2.27
LDLRP01130 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
LDLRP01130 AC067940.1-201ENST00000458411 300 ntBASIC0.89□□□□□ -2.27
LDLRP01130 SNORD4B-201ENST00000459083 72 ntBASIC0.89□□□□□ -2.27
LDLRP01130 MIR6082-201ENST00000613604 109 ntBASIC0.89□□□□□ -2.27
LDLRP01130 Y_RNA.42-201ENST00000362660 108 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RNU4-58P-201ENST00000363192 141 ntBASIC0.88□□□□□ -2.27
LDLRP01130 Y_RNA.219-201ENST00000364232 113 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
LDLRP01130 RNU6-524P-201ENST00000384270 107 ntBASIC0.88□□□□□ -2.27
LDLRP01130 MIR125B2-201ENST00000385128 89 ntBASIC0.88□□□□□ -2.27
LDLRP01130 SNORD100-201ENST00000408573 76 ntBASIC0.88□□□□□ -2.27
LDLRP01130 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
LDLRP01130 snoU13.11-201ENST00000459219 104 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RNU7-171P-201ENST00000459581 62 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
LDLRP01130 TRAJ51-201ENST00000504127 63 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.88□□□□□ -2.27
LDLRP01130 MIR4771-2-201ENST00000577758 74 ntBASIC0.88□□□□□ -2.27
LDLRP01130 MIR4771-1-201ENST00000582617 74 ntBASIC0.88□□□□□ -2.27
LDLRP01130 AL590095.2-201ENST00000604136 117 ntBASIC0.88□□□□□ -2.27
LDLRP01130 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.88□□□□□ -2.27
LDLRP01130 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
LDLRP01130 RNU6-1124P-201ENST00000384169 107 ntBASIC0.87□□□□□ -2.27
LDLRP01130 SNORA72.6-201ENST00000384520 129 ntBASIC0.87□□□□□ -2.27
LDLRP01130 MIR1257-201ENST00000408490 117 ntBASIC0.87□□□□□ -2.27
LDLRP01130 Y_RNA.611-201ENST00000410682 108 ntBASIC0.87□□□□□ -2.27
LDLRP01130 RNA5SP225-201ENST00000410874 135 ntBASIC0.87□□□□□ -2.27
LDLRP01130 SNORD63B-201ENST00000411005 70 ntBASIC0.87□□□□□ -2.27
LDLRP01130 RPS26P5-201ENST00000418544 335 ntBASIC0.87□□□□□ -2.27
LDLRP01130 RNU6-75P-201ENST00000515944 104 ntBASIC0.87□□□□□ -2.27
LDLRP01130 Y_RNA.685-201ENST00000516532 108 ntBASIC0.87□□□□□ -2.27
LDLRP01130 MIR4666B-201ENST00000578142 81 ntBASIC0.87□□□□□ -2.27
LDLRP01130 MIR4676-201ENST00000583078 72 ntBASIC0.87□□□□□ -2.27
LDLRP01130 Y_RNA.313-201ENST00000365095 103 ntBASIC0.86□□□□□ -2.27
LDLRP01130 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
LDLRP01130 MIR1255A-201ENST00000408338 113 ntBASIC0.86□□□□□ -2.27
LDLRP01130 Y_RNA.648-201ENST00000459455 110 ntBASIC0.86□□□□□ -2.27
LDLRP01130 RNU6-1194P-201ENST00000516208 104 ntBASIC0.86□□□□□ -2.27
LDLRP01130 RNU7-153P-201ENST00000516455 62 ntBASIC0.86□□□□□ -2.27
LDLRP01130 RNA5SP245-201ENST00000364239 121 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-1335P-201ENST00000365426 107 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-242P-201ENST00000384359 107 ntBASIC0.85□□□□□ -2.27
LDLRP01130 Y_RNA.536-201ENST00000384621 113 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-1254P-201ENST00000391266 104 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-519P-201ENST00000410590 108 ntBASIC0.85□□□□□ -2.27
LDLRP01130 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-448P-201ENST00000517052 107 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU7-156P-201ENST00000517214 74 ntBASIC0.85□□□□□ -2.27
LDLRP01130 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
LDLRP01130 SNORD92-201ENST00000585078 85 ntBASIC0.85□□□□□ -2.27
LDLRP01130 AC008608.1-201ENST00000603910 127 ntBASIC0.85□□□□□ -2.27
LDLRP01130 MIR1-1-201ENST00000362147 71 ntBASIC0.84□□□□□ -2.27
LDLRP01130 Y_RNA.56-201ENST00000362798 112 ntBASIC0.84□□□□□ -2.27
LDLRP01130 MIR100-201ENST00000385259 80 ntBASIC0.84□□□□□ -2.27
LDLRP01130 AC092628.1-201ENST00000436250 252 ntBASIC0.84□□□□□ -2.27
LDLRP01130 RNU7-56P-201ENST00000458744 62 ntBASIC0.84□□□□□ -2.27
LDLRP01130 RNU7-195P-201ENST00000458793 62 ntBASIC0.84□□□□□ -2.27
LDLRP01130 RNU6-765P-201ENST00000516916 99 ntBASIC0.84□□□□□ -2.27
LDLRP01130 MIR4804-201ENST00000581683 73 ntBASIC0.84□□□□□ -2.27
LDLRP01130 Y_RNA.115-201ENST00000363272 98 ntBASIC0.83□□□□□ -2.28
LDLRP01130 RNU6-957P-201ENST00000363652 99 ntBASIC0.83□□□□□ -2.28
LDLRP01130 Y_RNA.283-201ENST00000364798 112 ntBASIC0.83□□□□□ -2.28
LDLRP01130 RNU6-132P-201ENST00000383863 107 ntBASIC0.83□□□□□ -2.28
LDLRP01130 Y_RNA.426-201ENST00000384068 113 ntBASIC0.83□□□□□ -2.28
LDLRP01130 Y_RNA.437-201ENST00000384113 113 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR635-201ENST00000384830 98 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR519C-201ENST00000385053 87 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR519A1-201ENST00000385257 85 ntBASIC0.83□□□□□ -2.28
LDLRP01130 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
LDLRP01130 RNU7-102P-201ENST00000458948 62 ntBASIC0.83□□□□□ -2.28
LDLRP01130 U7.7-201ENST00000459276 60 ntBASIC0.83□□□□□ -2.28
LDLRP01130 AC140658.3-201ENST00000567603 271 ntBASIC0.83□□□□□ -2.28
LDLRP01130 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
LDLRP01130 MIR6513-201ENST00000621188 64 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR3202-2-201ENST00000635980 79 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR101-2-201ENST00000362195 79 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 221.8 ms