Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 RNU6-509P-201ENST00000363519 107 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNA5SP457-201ENST00000363657 124 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNU4-38P-201ENST00000364472 129 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNU6-934P-201ENST00000365154 107 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNU6-1276P-201ENST00000365372 104 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR516A2-201ENST00000384888 90 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR532-201ENST00000385025 91 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR516A1-201ENST00000385033 90 ntBASIC0.9□□□□□ -2.27
LDLRP01130 RNU7-85P-201ENST00000458851 63 ntBASIC0.9□□□□□ -2.27
LDLRP01130 AP003327.1-201ENST00000529684 127 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR1273G-201ENST00000577677 100 ntBASIC0.9□□□□□ -2.27
LDLRP01130 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
LDLRP01130 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC0.9□□□□□ -2.27
LDLRP01130 MIR548BB-201ENST00000626714 66 ntBASIC0.9□□□□□ -2.27
LDLRP01130 AC006160.2-201ENST00000637708 154 ntBASIC0.9□□□□□ -2.27
LDLRP01130 Y_RNA.13-201ENST00000362403 112 ntBASIC0.89□□□□□ -2.27
LDLRP01130 Y_RNA.57-201ENST00000362806 113 ntBASIC0.89□□□□□ -2.27
LDLRP01130 RNU6-403P-201ENST00000363163 104 ntBASIC0.89□□□□□ -2.27
LDLRP01130 RNU6-1187P-201ENST00000364771 110 ntBASIC0.89□□□□□ -2.27
LDLRP01130 SNORD78.1-201ENST00000390866 65 ntBASIC0.89□□□□□ -2.27
LDLRP01130 SNORD89-201ENST00000390981 114 ntBASIC0.89□□□□□ -2.27
LDLRP01130 AL161932.1-201ENST00000437408 146 ntBASIC0.89□□□□□ -2.27
LDLRP01130 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.89□□□□□ -2.27
LDLRP01130 AC067940.1-201ENST00000458411 300 ntBASIC0.89□□□□□ -2.27
LDLRP01130 SNORD4B-201ENST00000459083 72 ntBASIC0.89□□□□□ -2.27
LDLRP01130 MIR6082-201ENST00000613604 109 ntBASIC0.89□□□□□ -2.27
LDLRP01130 Y_RNA.42-201ENST00000362660 108 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RNU4-58P-201ENST00000363192 141 ntBASIC0.88□□□□□ -2.27
LDLRP01130 Y_RNA.219-201ENST00000364232 113 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.88□□□□□ -2.27
LDLRP01130 RNU6-524P-201ENST00000384270 107 ntBASIC0.88□□□□□ -2.27
LDLRP01130 MIR125B2-201ENST00000385128 89 ntBASIC0.88□□□□□ -2.27
LDLRP01130 SNORD100-201ENST00000408573 76 ntBASIC0.88□□□□□ -2.27
LDLRP01130 FABP5P4-201ENST00000437203 171 ntBASIC0.88□□□□□ -2.27
LDLRP01130 snoU13.11-201ENST00000459219 104 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RNU7-171P-201ENST00000459581 62 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RPL39P28-201ENST00000465655 155 ntBASIC0.88□□□□□ -2.27
LDLRP01130 TRAJ51-201ENST00000504127 63 ntBASIC0.88□□□□□ -2.27
LDLRP01130 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.88□□□□□ -2.27
LDLRP01130 MIR4771-2-201ENST00000577758 74 ntBASIC0.88□□□□□ -2.27
LDLRP01130 MIR4771-1-201ENST00000582617 74 ntBASIC0.88□□□□□ -2.27
LDLRP01130 AL590095.2-201ENST00000604136 117 ntBASIC0.88□□□□□ -2.27
LDLRP01130 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC0.88□□□□□ -2.27
LDLRP01130 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC0.87□□□□□ -2.27
LDLRP01130 RNU6-1124P-201ENST00000384169 107 ntBASIC0.87□□□□□ -2.27
LDLRP01130 SNORA72.6-201ENST00000384520 129 ntBASIC0.87□□□□□ -2.27
LDLRP01130 MIR1257-201ENST00000408490 117 ntBASIC0.87□□□□□ -2.27
LDLRP01130 Y_RNA.611-201ENST00000410682 108 ntBASIC0.87□□□□□ -2.27
LDLRP01130 RNA5SP225-201ENST00000410874 135 ntBASIC0.87□□□□□ -2.27
LDLRP01130 SNORD63B-201ENST00000411005 70 ntBASIC0.87□□□□□ -2.27
LDLRP01130 RPS26P5-201ENST00000418544 335 ntBASIC0.87□□□□□ -2.27
LDLRP01130 RNU6-75P-201ENST00000515944 104 ntBASIC0.87□□□□□ -2.27
LDLRP01130 Y_RNA.685-201ENST00000516532 108 ntBASIC0.87□□□□□ -2.27
LDLRP01130 MIR4666B-201ENST00000578142 81 ntBASIC0.87□□□□□ -2.27
LDLRP01130 MIR4676-201ENST00000583078 72 ntBASIC0.87□□□□□ -2.27
LDLRP01130 Y_RNA.313-201ENST00000365095 103 ntBASIC0.86□□□□□ -2.27
LDLRP01130 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC0.86□□□□□ -2.27
LDLRP01130 MIR1255A-201ENST00000408338 113 ntBASIC0.86□□□□□ -2.27
LDLRP01130 Y_RNA.648-201ENST00000459455 110 ntBASIC0.86□□□□□ -2.27
LDLRP01130 RNU6-1194P-201ENST00000516208 104 ntBASIC0.86□□□□□ -2.27
LDLRP01130 RNU7-153P-201ENST00000516455 62 ntBASIC0.86□□□□□ -2.27
LDLRP01130 RNA5SP245-201ENST00000364239 121 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-1335P-201ENST00000365426 107 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-242P-201ENST00000384359 107 ntBASIC0.85□□□□□ -2.27
LDLRP01130 Y_RNA.536-201ENST00000384621 113 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-1254P-201ENST00000391266 104 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-519P-201ENST00000410590 108 ntBASIC0.85□□□□□ -2.27
LDLRP01130 ACA64.5-201ENST00000516207 127 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNA5SP255-201ENST00000516370 107 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU6-448P-201ENST00000517052 107 ntBASIC0.85□□□□□ -2.27
LDLRP01130 RNU7-156P-201ENST00000517214 74 ntBASIC0.85□□□□□ -2.27
LDLRP01130 MIR4714-201ENST00000580728 77 ntBASIC0.85□□□□□ -2.27
LDLRP01130 SNORD92-201ENST00000585078 85 ntBASIC0.85□□□□□ -2.27
LDLRP01130 AC008608.1-201ENST00000603910 127 ntBASIC0.85□□□□□ -2.27
LDLRP01130 MIR1-1-201ENST00000362147 71 ntBASIC0.84□□□□□ -2.27
LDLRP01130 Y_RNA.56-201ENST00000362798 112 ntBASIC0.84□□□□□ -2.27
LDLRP01130 MIR100-201ENST00000385259 80 ntBASIC0.84□□□□□ -2.27
LDLRP01130 AC092628.1-201ENST00000436250 252 ntBASIC0.84□□□□□ -2.27
LDLRP01130 RNU7-56P-201ENST00000458744 62 ntBASIC0.84□□□□□ -2.27
LDLRP01130 RNU7-195P-201ENST00000458793 62 ntBASIC0.84□□□□□ -2.27
LDLRP01130 RNU6-765P-201ENST00000516916 99 ntBASIC0.84□□□□□ -2.27
LDLRP01130 MIR4804-201ENST00000581683 73 ntBASIC0.84□□□□□ -2.27
LDLRP01130 Y_RNA.115-201ENST00000363272 98 ntBASIC0.83□□□□□ -2.28
LDLRP01130 RNU6-957P-201ENST00000363652 99 ntBASIC0.83□□□□□ -2.28
LDLRP01130 Y_RNA.283-201ENST00000364798 112 ntBASIC0.83□□□□□ -2.28
LDLRP01130 RNU6-132P-201ENST00000383863 107 ntBASIC0.83□□□□□ -2.28
LDLRP01130 Y_RNA.426-201ENST00000384068 113 ntBASIC0.83□□□□□ -2.28
LDLRP01130 Y_RNA.437-201ENST00000384113 113 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR635-201ENST00000384830 98 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR519C-201ENST00000385053 87 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR519A1-201ENST00000385257 85 ntBASIC0.83□□□□□ -2.28
LDLRP01130 AL606490.4-201ENST00000423117 127 ntBASIC0.83□□□□□ -2.28
LDLRP01130 RNU7-102P-201ENST00000458948 62 ntBASIC0.83□□□□□ -2.28
LDLRP01130 U7.7-201ENST00000459276 60 ntBASIC0.83□□□□□ -2.28
LDLRP01130 AC140658.3-201ENST00000567603 271 ntBASIC0.83□□□□□ -2.28
LDLRP01130 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.83□□□□□ -2.28
LDLRP01130 MIR6513-201ENST00000621188 64 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR3202-2-201ENST00000635980 79 ntBASIC0.83□□□□□ -2.28
LDLRP01130 MIR101-2-201ENST00000362195 79 ntBASIC0.82□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 181 ms