Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 MIR34C-201ENST00000384831 77 ntBASIC-1.57□□□□□ -2.66
SNX4O95219 MIR548E-201ENST00000408287 88 ntBASIC-1.57□□□□□ -2.66
SNX4O95219 RNU6-592P-201ENST00000411333 103 ntBASIC-1.57□□□□□ -2.66
SNX4O95219 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.57□□□□□ -2.66
SNX4O95219 SNORD18.2-201ENST00000459604 70 ntBASIC-1.57□□□□□ -2.66
SNX4O95219 Y_RNA.702-201ENST00000516843 96 ntBASIC-1.57□□□□□ -2.66
SNX4O95219 Y_RNA.153-201ENST00000363615 91 ntBASIC-1.58□□□□□ -2.66
SNX4O95219 Y_RNA.437-201ENST00000384113 113 ntBASIC-1.58□□□□□ -2.66
SNX4O95219 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.58□□□□□ -2.66
SNX4O95219 RNU6-243P-201ENST00000391140 107 ntBASIC-1.58□□□□□ -2.66
SNX4O95219 RNU6-706P-201ENST00000517229 104 ntBASIC-1.58□□□□□ -2.66
SNX4O95219 MIR3165-201ENST00000579874 75 ntBASIC-1.58□□□□□ -2.66
SNX4O95219 Y_RNA.182-201ENST00000363880 111 ntBASIC-1.59□□□□□ -2.66
SNX4O95219 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.59□□□□□ -2.66
SNX4O95219 RNU6-474P-201ENST00000384243 107 ntBASIC-1.59□□□□□ -2.66
SNX4O95219 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.59□□□□□ -2.66
SNX4O95219 RNU6-713P-201ENST00000384761 107 ntBASIC-1.59□□□□□ -2.66
SNX4O95219 AL161932.1-201ENST00000437408 146 ntBASIC-1.59□□□□□ -2.66
SNX4O95219 RNU7-134P-201ENST00000458997 64 ntBASIC-1.59□□□□□ -2.66
SNX4O95219 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.6□□□□□ -2.67
SNX4O95219 RNU6-275P-201ENST00000364910 107 ntBASIC-1.6□□□□□ -2.67
SNX4O95219 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.6□□□□□ -2.67
SNX4O95219 MIR548O2-201ENST00000616090 70 ntBASIC-1.6□□□□□ -2.67
SNX4O95219 AC132825.6-201ENST00000638861 357 ntBASIC-1.6□□□□□ -2.67
SNX4O95219 Y_RNA.239-201ENST00000364444 113 ntBASIC-1.61□□□□□ -2.67
SNX4O95219 Y_RNA.308-201ENST00000365043 101 ntBASIC-1.61□□□□□ -2.67
SNX4O95219 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.61□□□□□ -2.67
SNX4O95219 MTND1P19-201ENST00000511780 315 ntBASIC-1.61□□□□□ -2.67
SNX4O95219 RNU6-479P-201ENST00000516348 105 ntBASIC-1.61□□□□□ -2.67
SNX4O95219 MIR4680-201ENST00000580906 66 ntBASIC-1.61□□□□□ -2.67
SNX4O95219 RNU6-588P-201ENST00000410281 105 ntBASIC-1.62□□□□□ -2.67
SNX4O95219 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.62□□□□□ -2.67
SNX4O95219 AC022028.1-201ENST00000412054 408 ntBASIC-1.62□□□□□ -2.67
SNX4O95219 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.62□□□□□ -2.67
SNX4O95219 RNU4-32P-201ENST00000363404 141 ntBASIC-1.63□□□□□ -2.67
SNX4O95219 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.63□□□□□ -2.67
SNX4O95219 SNORD36A-201ENST00000362874 73 ntBASIC-1.64□□□□□ -2.67
SNX4O95219 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.64□□□□□ -2.67
SNX4O95219 SNORD18B-201ENST00000365659 72 ntBASIC-1.64□□□□□ -2.67
SNX4O95219 MIR124-2-201ENST00000385081 109 ntBASIC-1.64□□□□□ -2.67
SNX4O95219 RNU6-493P-201ENST00000391321 108 ntBASIC-1.64□□□□□ -2.67
SNX4O95219 MIR8485-201ENST00000401372 91 ntBASIC-1.64□□□□□ -2.67
SNX4O95219 Y_RNA.601-201ENST00000410500 113 ntBASIC-1.64□□□□□ -2.67
SNX4O95219 SNX3P1X-201ENST00000414887 175 ntBASIC-1.64□□□□□ -2.67
SNX4O95219 SNORD115-23-201ENST00000364461 82 ntBASIC-1.65□□□□□ -2.67
SNX4O95219 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.65□□□□□ -2.67
SNX4O95219 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.65□□□□□ -2.67
SNX4O95219 RNY3P16-201ENST00000516338 101 ntBASIC-1.65□□□□□ -2.67
SNX4O95219 AC026421.1-201ENST00000519101 163 ntBASIC-1.65□□□□□ -2.67
SNX4O95219 AC138207.3-201ENST00000585289 166 ntBASIC-1.65□□□□□ -2.67
SNX4O95219 RNU6-768P-201ENST00000384683 107 ntBASIC-1.66□□□□□ -2.68
SNX4O95219 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.66□□□□□ -2.68
SNX4O95219 AC134503.1-201ENST00000633048 54 ntBASIC-1.66□□□□□ -2.68
SNX4O95219 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.67□□□□□ -2.68
SNX4O95219 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.67□□□□□ -2.68
SNX4O95219 SNORA75.5-201ENST00000391291 81 ntBASIC-1.67□□□□□ -2.68
SNX4O95219 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.67□□□□□ -2.68
SNX4O95219 snoR1.1-201ENST00000628177 80 ntBASIC-1.67□□□□□ -2.68
SNX4O95219 MIR4320-201ENST00000636981 65 ntBASIC-1.67□□□□□ -2.68
SNX4O95219 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.68□□□□□ -2.68
SNX4O95219 RNU6-1125P-201ENST00000363601 107 ntBASIC-1.68□□□□□ -2.68
SNX4O95219 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.68□□□□□ -2.68
SNX4O95219 MIR6773-201ENST00000612812 74 ntBASIC-1.68□□□□□ -2.68
SNX4O95219 RNU6-957P-201ENST00000363652 99 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 RNU6-54P-201ENST00000365563 107 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 MIR1302-6-201ENST00000408466 90 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 RNU6-521P-201ENST00000516663 105 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 RNY4P20-201ENST00000516678 93 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 RNU6-762P-201ENST00000517107 102 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 AC068339.1-201ENST00000526965 141 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 MIR4643-201ENST00000577473 78 ntBASIC-1.69□□□□□ -2.68
SNX4O95219 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.7□□□□□ -2.68
SNX4O95219 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.7□□□□□ -2.68
SNX4O95219 MIRLET7B-201ENST00000385140 83 ntBASIC-1.7□□□□□ -2.68
SNX4O95219 RNU6-337P-201ENST00000391243 106 ntBASIC-1.7□□□□□ -2.68
SNX4O95219 HLA-S-202ENST00000425174 53 ntBASIC-1.7□□□□□ -2.68
SNX4O95219 Y_RNA.804-201ENST00000615262 101 ntBASIC-1.7□□□□□ -2.68
SNX4O95219 SNORD101-201ENST00000384027 73 ntBASIC-1.71□□□□□ -2.68
SNX4O95219 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.71□□□□□ -2.68
SNX4O95219 MIR3149-201ENST00000584629 83 ntBASIC-1.71□□□□□ -2.68
SNX4O95219 AL137067.1-201ENST00000615933 120 ntBASIC-1.71□□□□□ -2.68
SNX4O95219 AL160413.1-201ENST00000622780 310 ntBASIC-1.71□□□□□ -2.68
SNX4O95219 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.71□□□□□ -2.68
SNX4O95219 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.72□□□□□ -2.68
SNX4O95219 SNORD114-4-201ENST00000363962 75 ntBASIC-1.72□□□□□ -2.68
SNX4O95219 RNY4P28-201ENST00000365281 93 ntBASIC-1.72□□□□□ -2.68
SNX4O95219 RNU7-6P-201ENST00000516845 62 ntBASIC-1.72□□□□□ -2.68
SNX4O95219 MIR4696-201ENST00000581431 70 ntBASIC-1.72□□□□□ -2.68
SNX4O95219 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 Y_RNA.337-201ENST00000365312 102 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 MIR548P-201ENST00000408336 84 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 RNU6-985P-201ENST00000410182 104 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 SNORD42B-201ENST00000458893 67 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 MIR4464-201ENST00000580818 92 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 MIR548S-201ENST00000581352 82 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 MIR6818-201ENST00000621576 65 ntBASIC-1.73□□□□□ -2.69
SNX4O95219 RNU6-235P-201ENST00000362644 107 ntBASIC-1.74□□□□□ -2.69
SNX4O95219 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.74□□□□□ -2.69
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms