Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 SNORD115-44-201ENST00000365391 82 ntBASIC0.13□□□□□ -2.39
NKX2-2O95096 Y_RNA.353-201ENST00000365440 108 ntBASIC0.13□□□□□ -2.39
NKX2-2O95096 RNU6-81P-201ENST00000365608 104 ntBASIC0.13□□□□□ -2.39
NKX2-2O95096 RNU6-959P-201ENST00000384671 107 ntBASIC0.13□□□□□ -2.39
NKX2-2O95096 RNU6-243P-201ENST00000391140 107 ntBASIC0.13□□□□□ -2.39
NKX2-2O95096 AC068339.1-201ENST00000526965 141 ntBASIC0.13□□□□□ -2.39
NKX2-2O95096 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
NKX2-2O95096 SNORA70.25-201ENST00000612741 95 ntBASIC0.13□□□□□ -2.39
NKX2-2O95096 RNU6-509P-201ENST00000363519 107 ntBASIC0.12□□□□□ -2.39
NKX2-2O95096 MIR548A1-201ENST00000385041 97 ntBASIC0.12□□□□□ -2.39
NKX2-2O95096 TMSB4XP3-201ENST00000445144 114 ntBASIC0.12□□□□□ -2.39
NKX2-2O95096 RNU6-1333P-201ENST00000516162 93 ntBASIC0.12□□□□□ -2.39
NKX2-2O95096 U7.6-201ENST00000610841 64 ntBASIC0.12□□□□□ -2.39
NKX2-2O95096 uc_338.28-201ENST00000612082 187 ntBASIC0.12□□□□□ -2.39
NKX2-2O95096 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
NKX2-2O95096 RNY3P2-201ENST00000362918 102 ntBASIC0.11□□□□□ -2.39
NKX2-2O95096 RNU6-127P-201ENST00000390897 107 ntBASIC0.11□□□□□ -2.39
NKX2-2O95096 RNU7-129P-201ENST00000516128 62 ntBASIC0.11□□□□□ -2.39
NKX2-2O95096 RNU6-1232P-201ENST00000516299 86 ntBASIC0.11□□□□□ -2.39
NKX2-2O95096 RNU6-832P-201ENST00000363319 107 ntBASIC0.1□□□□□ -2.39
NKX2-2O95096 U8.6-201ENST00000364939 135 ntBASIC0.1□□□□□ -2.39
NKX2-2O95096 Y_RNA.508-201ENST00000384502 114 ntBASIC0.1□□□□□ -2.39
NKX2-2O95096 PVT1_3.1-201ENST00000620853 95 ntBASIC0.1□□□□□ -2.39
NKX2-2O95096 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.09□□□□□ -2.39
NKX2-2O95096 Y_RNA.281-201ENST00000364774 94 ntBASIC0.09□□□□□ -2.4
NKX2-2O95096 MIR501-201ENST00000390204 84 ntBASIC0.09□□□□□ -2.4
NKX2-2O95096 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
NKX2-2O95096 MIR5009-201ENST00000578736 100 ntBASIC0.09□□□□□ -2.4
NKX2-2O95096 TRDV1-202ENST00000621643 102 ntBASIC0.09□□□□□ -2.4
NKX2-2O95096 AC010487.4-201ENST00000637027 61 ntBASIC0.09□□□□□ -2.4
NKX2-2O95096 RNA5SP214-201ENST00000363378 118 ntBASIC0.08□□□□□ -2.4
NKX2-2O95096 SNORD114-9-201ENST00000364370 72 ntBASIC0.08□□□□□ -2.4
NKX2-2O95096 RNU6-1163P-201ENST00000364516 107 ntBASIC0.08□□□□□ -2.4
NKX2-2O95096 RNU6-880P-201ENST00000384526 107 ntBASIC0.08□□□□□ -2.4
NKX2-2O95096 AC008267.6-201ENST00000441664 139 ntBASIC0.08□□□□□ -2.4
NKX2-2O95096 RNU6-782P-201ENST00000516852 104 ntBASIC0.08□□□□□ -2.4
NKX2-2O95096 MIR548AG2-201ENST00000581228 64 ntBASIC0.08□□□□□ -2.4
NKX2-2O95096 MIR548AD-201ENST00000584780 82 ntBASIC0.08□□□□□ -2.4
NKX2-2O95096 RNU6-1125P-201ENST00000363601 107 ntBASIC0.07□□□□□ -2.4
NKX2-2O95096 RNU6-480P-201ENST00000384332 107 ntBASIC0.07□□□□□ -2.4
NKX2-2O95096 MIR617-201ENST00000385030 97 ntBASIC0.07□□□□□ -2.4
NKX2-2O95096 RNA5SP299-201ENST00000391203 116 ntBASIC0.07□□□□□ -2.4
NKX2-2O95096 RNA5SP484-201ENST00000458857 111 ntBASIC0.07□□□□□ -2.4
NKX2-2O95096 AC104408.1-201ENST00000605241 170 ntBASIC0.07□□□□□ -2.4
NKX2-2O95096 MIR499B-201ENST00000636498 73 ntBASIC0.07□□□□□ -2.4
NKX2-2O95096 RNU6-1244P-201ENST00000363614 108 ntBASIC0.06□□□□□ -2.4
NKX2-2O95096 AC006210.1-201ENST00000424882 111 ntBASIC0.06□□□□□ -2.4
NKX2-2O95096 NAMPTP3-201ENST00000569273 224 ntBASIC0.06□□□□□ -2.4
NKX2-2O95096 Y_RNA.78-201ENST00000362970 110 ntBASIC0.05□□□□□ -2.4
NKX2-2O95096 Y_RNA.163-201ENST00000363702 113 ntBASIC0.05□□□□□ -2.4
NKX2-2O95096 MIR519E-201ENST00000385075 84 ntBASIC0.05□□□□□ -2.4
NKX2-2O95096 SNORD110-201ENST00000408189 75 ntBASIC0.05□□□□□ -2.4
NKX2-2O95096 AC141557.1-201ENST00000540982 400 ntBASIC0.05□□□□□ -2.4
NKX2-2O95096 MIR4439-201ENST00000583746 80 ntBASIC0.05□□□□□ -2.4
NKX2-2O95096 MIR4743-201ENST00000584576 69 ntBASIC0.05□□□□□ -2.4
NKX2-2O95096 MTRNR2L2-201ENST00000604882 87 ntBASIC0.05□□□□□ -2.4
NKX2-2O95096 RNU6-957P-201ENST00000363652 99 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 RNU1-141P-201ENST00000364623 158 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 SNORD116-21-201ENST00000384507 92 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 MIR610-201ENST00000385139 96 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 Y_RNA.596-201ENST00000410462 109 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 AC093423.1-201ENST00000440817 142 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 MIR2113-201ENST00000459007 91 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 Y_RNA.659-201ENST00000515994 113 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 RNU6-412P-201ENST00000516434 106 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 MIR3613-201ENST00000579844 87 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 RN7SL793P-201ENST00000583259 296 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 MIR6718-201ENST00000616153 80 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.04□□□□□ -2.4
NKX2-2O95096 U6.100-201ENST00000636230 99 ntBASIC0.04□□□□□ -2.4
NKX2-2O95096 Y_RNA.125-201ENST00000363371 111 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 Y_RNA.261-201ENST00000364631 102 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 RNU6-652P-201ENST00000365488 107 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 MIR181B2-201ENST00000385004 89 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 RNU6-466P-201ENST00000391224 103 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 AL161932.1-201ENST00000437408 146 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 MIR4514-201ENST00000581410 57 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 MIR4677-201ENST00000584153 80 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 AC023932.2-201ENST00000603176 175 ntBASIC0.03□□□□□ -2.4
NKX2-2O95096 RNU6-161P-201ENST00000363051 106 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 SNORD45B-201ENST00000364617 72 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 MIR643-201ENST00000385267 97 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 MIR892B-201ENST00000401279 77 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 MIR548H2-201ENST00000408874 88 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 HMGN2P22-201ENST00000427588 175 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 AC109327.2-201ENST00000448339 378 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 Y_RNA.660-201ENST00000516002 120 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 RNU6-287P-201ENST00000516230 98 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 AL365222.1-201ENST00000614661 98 ntBASIC0.02□□□□□ -2.41
NKX2-2O95096 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC0.02□□□□□ -2.41
NKX2-2O95096 Y_RNA.10-201ENST00000362371 110 ntBASIC0.01□□□□□ -2.41
NKX2-2O95096 RNU6-1014P-201ENST00000383940 103 ntBASIC0.01□□□□□ -2.41
NKX2-2O95096 Y_RNA.648-201ENST00000459455 110 ntBASIC0.01□□□□□ -2.41
NKX2-2O95096 RNA5SP325-201ENST00000363756 130 ntBASIC0□□□□□ -2.41
NKX2-2O95096 RNU6-1107P-201ENST00000364817 104 ntBASIC0□□□□□ -2.41
NKX2-2O95096 SNORA51.5-201ENST00000384126 131 ntBASIC0□□□□□ -2.41
NKX2-2O95096 RNU6-86P-201ENST00000606534 107 ntBASIC0□□□□□ -2.41
NKX2-2O95096 AC069503.3-201ENST00000618674 145 ntBASIC0□□□□□ -2.41
NKX2-2O95096 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.01□□□□□ -2.41
NKX2-2O95096 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms