Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 MIR26B-201ENST00000362251 77 ntBASIC1.29□□□□□ -2.2
SHOXO15266 RNU6-957P-201ENST00000363652 99 ntBASIC1.29□□□□□ -2.2
SHOXO15266 RNU1-124P-201ENST00000363861 145 ntBASIC1.29□□□□□ -2.2
SHOXO15266 SNORD115-27-201ENST00000364430 82 ntBASIC1.29□□□□□ -2.2
SHOXO15266 RNA5SP117-201ENST00000365294 118 ntBASIC1.29□□□□□ -2.2
SHOXO15266 RNU6-524P-201ENST00000384270 107 ntBASIC1.29□□□□□ -2.2
SHOXO15266 MIR489-201ENST00000384923 84 ntBASIC1.29□□□□□ -2.2
SHOXO15266 RNA5SP61-201ENST00000516453 100 ntBASIC1.28□□□□□ -2.2
SHOXO15266 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
SHOXO15266 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.28□□□□□ -2.2
SHOXO15266 RNU6-469P-201ENST00000516253 101 ntBASIC1.27□□□□□ -2.21
SHOXO15266 RNA5SP404-201ENST00000517118 132 ntBASIC1.27□□□□□ -2.21
SHOXO15266 AC104996.3-201ENST00000590718 94 ntBASIC1.27□□□□□ -2.21
SHOXO15266 uc_338.16-201ENST00000621804 95 ntBASIC1.27□□□□□ -2.21
SHOXO15266 MIR618-201ENST00000385287 98 ntBASIC1.26□□□□□ -2.21
SHOXO15266 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
SHOXO15266 SNORD78.1-201ENST00000390866 65 ntBASIC1.26□□□□□ -2.21
SHOXO15266 SNORD124-201ENST00000459577 104 ntBASIC1.26□□□□□ -2.21
SHOXO15266 RNU6-75P-201ENST00000515944 104 ntBASIC1.26□□□□□ -2.21
SHOXO15266 SNORD53B-201ENST00000577887 78 ntBASIC1.26□□□□□ -2.21
SHOXO15266 Y_RNA.32-201ENST00000362589 110 ntBASIC1.25□□□□□ -2.21
SHOXO15266 RNA5SP245-201ENST00000364239 121 ntBASIC1.25□□□□□ -2.21
SHOXO15266 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
SHOXO15266 MIR1304-201ENST00000408243 91 ntBASIC1.25□□□□□ -2.21
SHOXO15266 AC002350.1-201ENST00000490759 375 ntBASIC1.25□□□□□ -2.21
SHOXO15266 SNORA31.14-201ENST00000516728 116 ntBASIC1.25□□□□□ -2.21
SHOXO15266 Y_RNA.239-201ENST00000364444 113 ntBASIC1.24□□□□□ -2.21
SHOXO15266 Y_RNA.437-201ENST00000384113 113 ntBASIC1.24□□□□□ -2.21
SHOXO15266 MIR517C-201ENST00000385103 95 ntBASIC1.24□□□□□ -2.21
SHOXO15266 SNORD13-201ENST00000459299 104 ntBASIC1.24□□□□□ -2.21
SHOXO15266 Y_RNA.685-201ENST00000516532 108 ntBASIC1.24□□□□□ -2.21
SHOXO15266 MIR4666B-201ENST00000578142 81 ntBASIC1.24□□□□□ -2.21
SHOXO15266 MIR4796-201ENST00000580742 81 ntBASIC1.24□□□□□ -2.21
SHOXO15266 MIR3064-201ENST00000581130 66 ntBASIC1.24□□□□□ -2.21
SHOXO15266 MIR6504-201ENST00000613520 61 ntBASIC1.24□□□□□ -2.21
SHOXO15266 SNORD101-201ENST00000384027 73 ntBASIC1.23□□□□□ -2.21
SHOXO15266 RNU6-1124P-201ENST00000384169 107 ntBASIC1.23□□□□□ -2.21
SHOXO15266 Y_RNA.491-201ENST00000384417 107 ntBASIC1.23□□□□□ -2.21
SHOXO15266 Y_RNA.596-201ENST00000410462 109 ntBASIC1.23□□□□□ -2.21
SHOXO15266 AP1B1P2-201ENST00000416196 106 ntBASIC1.23□□□□□ -2.21
SHOXO15266 RNU6-1265P-201ENST00000516342 103 ntBASIC1.23□□□□□ -2.21
SHOXO15266 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.22□□□□□ -2.21
SHOXO15266 Y_RNA.327-201ENST00000365201 102 ntBASIC1.22□□□□□ -2.21
SHOXO15266 SNORD115-44-201ENST00000365391 82 ntBASIC1.22□□□□□ -2.21
SHOXO15266 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.22□□□□□ -2.21
SHOXO15266 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
SHOXO15266 RNU6-664P-201ENST00000362381 107 ntBASIC1.21□□□□□ -2.22
SHOXO15266 SNORD115-24-201ENST00000363528 82 ntBASIC1.21□□□□□ -2.22
SHOXO15266 Y_RNA.221-201ENST00000364248 96 ntBASIC1.21□□□□□ -2.22
SHOXO15266 MIR573-201ENST00000384964 99 ntBASIC1.21□□□□□ -2.22
SHOXO15266 SNORA67.6-201ENST00000391093 99 ntBASIC1.21□□□□□ -2.22
SHOXO15266 RNA5SP255-201ENST00000516370 107 ntBASIC1.21□□□□□ -2.22
SHOXO15266 SNORA25.13-201ENST00000516395 103 ntBASIC1.21□□□□□ -2.22
SHOXO15266 RNU1-92P-201ENST00000517017 135 ntBASIC1.21□□□□□ -2.22
SHOXO15266 AC140658.3-201ENST00000567603 271 ntBASIC1.21□□□□□ -2.22
SHOXO15266 MIRLET7F1-201ENST00000362202 87 ntBASIC1.2□□□□□ -2.22
SHOXO15266 RNU6-1229P-201ENST00000364295 107 ntBASIC1.2□□□□□ -2.22
SHOXO15266 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SHOXO15266 RNU7-153P-201ENST00000516455 62 ntBASIC1.2□□□□□ -2.22
SHOXO15266 SNORA18.5-201ENST00000516616 101 ntBASIC1.2□□□□□ -2.22
SHOXO15266 RNA5SP480-201ENST00000516840 109 ntBASIC1.2□□□□□ -2.22
SHOXO15266 RNY4P3-201ENST00000365254 95 ntBASIC1.19□□□□□ -2.22
SHOXO15266 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
SHOXO15266 RNU6-132P-201ENST00000383863 107 ntBASIC1.19□□□□□ -2.22
SHOXO15266 RNA5SP292-201ENST00000390974 118 ntBASIC1.19□□□□□ -2.22
SHOXO15266 MIR1323-201ENST00000408090 73 ntBASIC1.19□□□□□ -2.22
SHOXO15266 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
SHOXO15266 AL606490.4-201ENST00000423117 127 ntBASIC1.19□□□□□ -2.22
SHOXO15266 AL354695.1-201ENST00000427935 228 ntBASIC1.19□□□□□ -2.22
SHOXO15266 RNU7-13P-201ENST00000516413 62 ntBASIC1.19□□□□□ -2.22
SHOXO15266 RNU6-1057P-201ENST00000517162 102 ntBASIC1.19□□□□□ -2.22
SHOXO15266 SNORA31.24-201ENST00000517232 57 ntBASIC1.19□□□□□ -2.22
SHOXO15266 MIR4452-201ENST00000583004 71 ntBASIC1.19□□□□□ -2.22
SHOXO15266 U6.100-201ENST00000636230 99 ntBASIC1.19□□□□□ -2.22
SHOXO15266 MIR758-201ENST00000390227 88 ntBASIC1.18□□□□□ -2.22
SHOXO15266 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.18□□□□□ -2.22
SHOXO15266 MIR4639-201ENST00000584938 69 ntBASIC1.18□□□□□ -2.22
SHOXO15266 MTRNR2L2-201ENST00000604882 87 ntBASIC1.18□□□□□ -2.22
SHOXO15266 RNU6-228P-201ENST00000362700 106 ntBASIC1.17□□□□□ -2.22
SHOXO15266 Y_RNA.316-201ENST00000365118 111 ntBASIC1.17□□□□□ -2.22
SHOXO15266 RNU4-45P-201ENST00000365469 141 ntBASIC1.17□□□□□ -2.22
SHOXO15266 RNU6-652P-201ENST00000365488 107 ntBASIC1.17□□□□□ -2.22
SHOXO15266 RNU6-1275P-201ENST00000391087 107 ntBASIC1.17□□□□□ -2.22
SHOXO15266 RNU6-935P-201ENST00000410371 100 ntBASIC1.17□□□□□ -2.22
SHOXO15266 FGF7P7-201ENST00000514120 227 ntBASIC1.17□□□□□ -2.22
SHOXO15266 AC068338.1-201ENST00000565567 176 ntBASIC1.17□□□□□ -2.22
SHOXO15266 MIR3612-201ENST00000579753 87 ntBASIC1.17□□□□□ -2.22
SHOXO15266 MIR4696-201ENST00000581431 70 ntBASIC1.17□□□□□ -2.22
SHOXO15266 RNA5SP403-201ENST00000363598 108 ntBASIC1.16□□□□□ -2.22
SHOXO15266 SNORA17.3-201ENST00000391159 129 ntBASIC1.16□□□□□ -2.22
SHOXO15266 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.16□□□□□ -2.22
SHOXO15266 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.16□□□□□ -2.22
SHOXO15266 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.16□□□□□ -2.22
SHOXO15266 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.16□□□□□ -2.22
SHOXO15266 RNU5F-1-201ENST00000362507 117 ntBASIC1.15□□□□□ -2.23
SHOXO15266 Y_RNA.36-201ENST00000362602 112 ntBASIC1.15□□□□□ -2.23
SHOXO15266 RNU6-129P-201ENST00000391022 107 ntBASIC1.15□□□□□ -2.23
SHOXO15266 RNU6-380P-201ENST00000410207 107 ntBASIC1.15□□□□□ -2.23
SHOXO15266 Y_RNA.660-201ENST00000516002 120 ntBASIC1.15□□□□□ -2.23
SHOXO15266 MIR4661-201ENST00000582720 75 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms