Protein–RNA interactions for Protein: O15240

VGF, Neurosecretory protein VGF, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGFO15240 RNU6-274P-201ENST00000459566 107 ntBASIC2.73□□□□□ -1.97
VGFO15240 AC106800.4-201ENST00000614905 153 ntBASIC2.73□□□□□ -1.97
VGFO15240 AC027335.2-201ENST00000624030 375 ntBASIC2.73□□□□□ -1.97
VGFO15240 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.73□□□□□ -1.97
VGFO15240 MIR4773-1-201ENST00000637203 78 ntBASIC2.73□□□□□ -1.97
VGFO15240 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VGFO15240 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
VGFO15240 MIR17-201ENST00000385012 84 ntBASIC2.72□□□□□ -1.97
VGFO15240 MIR2113-201ENST00000459007 91 ntBASIC2.72□□□□□ -1.97
VGFO15240 SNORA31.2-201ENST00000516019 134 ntBASIC2.72□□□□□ -1.97
VGFO15240 RN7SKP88-201ENST00000516847 250 ntBASIC2.72□□□□□ -1.97
VGFO15240 7SK.8-201ENST00000612110 250 ntBASIC2.72□□□□□ -1.97
VGFO15240 7SK.11-201ENST00000615477 250 ntBASIC2.72□□□□□ -1.97
VGFO15240 7SK.13-201ENST00000622040 250 ntBASIC2.72□□□□□ -1.97
VGFO15240 SNORA17.3-201ENST00000391159 129 ntBASIC2.71□□□□□ -1.98
VGFO15240 AC108667.1-201ENST00000428618 249 ntBASIC2.71□□□□□ -1.98
VGFO15240 AC003989.2-201ENST00000440224 169 ntBASIC2.71□□□□□ -1.98
VGFO15240 RNU6-287P-201ENST00000516230 98 ntBASIC2.71□□□□□ -1.98
VGFO15240 MIR4498-201ENST00000577599 66 ntBASIC2.71□□□□□ -1.98
VGFO15240 AP000553.5-201ENST00000641933 54 ntBASIC2.71□□□□□ -1.98
VGFO15240 U3.27-201ENST00000391237 200 ntBASIC2.7□□□□□ -1.98
VGFO15240 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.7□□□□□ -1.98
VGFO15240 RNU7-102P-201ENST00000458948 62 ntBASIC2.7□□□□□ -1.98
VGFO15240 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.7□□□□□ -1.98
VGFO15240 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
VGFO15240 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
VGFO15240 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
VGFO15240 SNORA25.4-201ENST00000363666 124 ntBASIC2.69□□□□□ -1.98
VGFO15240 Y_RNA.443-201ENST00000384135 111 ntBASIC2.69□□□□□ -1.98
VGFO15240 MIR9-3-201ENST00000385084 90 ntBASIC2.69□□□□□ -1.98
VGFO15240 RNU6-994P-201ENST00000410507 111 ntBASIC2.69□□□□□ -1.98
VGFO15240 AC244505.6-201ENST00000452829 130 ntBASIC2.69□□□□□ -1.98
VGFO15240 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
VGFO15240 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.68□□□□□ -1.98
VGFO15240 SNORD115-22-201ENST00000364456 82 ntBASIC2.68□□□□□ -1.98
VGFO15240 SNORD115-44-201ENST00000365391 82 ntBASIC2.68□□□□□ -1.98
VGFO15240 AL591704.2-201ENST00000421658 181 ntBASIC2.68□□□□□ -1.98
VGFO15240 AC025033.1-201ENST00000463883 194 ntBASIC2.68□□□□□ -1.98
VGFO15240 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.68□□□□□ -1.98
VGFO15240 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC2.68□□□□□ -1.98
VGFO15240 RNA5SP190-201ENST00000365222 118 ntBASIC2.67□□□□□ -1.98
VGFO15240 RNA5SP37-201ENST00000365420 130 ntBASIC2.67□□□□□ -1.98
VGFO15240 RNU6-604P-201ENST00000390917 100 ntBASIC2.67□□□□□ -1.98
VGFO15240 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.67□□□□□ -1.98
VGFO15240 RNA5SP160-201ENST00000364866 120 ntBASIC2.66□□□□□ -1.98
VGFO15240 RNU6-752P-201ENST00000516376 102 ntBASIC2.66□□□□□ -1.98
VGFO15240 RNU6-977P-201ENST00000516411 103 ntBASIC2.66□□□□□ -1.98
VGFO15240 MIR4255-201ENST00000579351 72 ntBASIC2.66□□□□□ -1.98
VGFO15240 RNU6-1216P-201ENST00000362590 107 ntBASIC2.65□□□□□ -1.99
VGFO15240 RNU6-382P-201ENST00000365181 106 ntBASIC2.65□□□□□ -1.99
VGFO15240 RNU7-13P-201ENST00000516413 62 ntBASIC2.65□□□□□ -1.99
VGFO15240 SNORA25.15-201ENST00000516487 89 ntBASIC2.65□□□□□ -1.99
VGFO15240 AL078603.1-201ENST00000603824 313 ntBASIC2.65□□□□□ -1.99
VGFO15240 AC084768.2-201ENST00000622736 221 ntBASIC2.65□□□□□ -1.99
VGFO15240 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
VGFO15240 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
VGFO15240 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
VGFO15240 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
VGFO15240 MIR934-201ENST00000401241 83 ntBASIC2.64□□□□□ -1.99
VGFO15240 RNA5SP233-201ENST00000459153 113 ntBASIC2.64□□□□□ -1.99
VGFO15240 SNORD113.1-201ENST00000363280 73 ntBASIC2.63□□□□□ -1.99
VGFO15240 Y_RNA.363-201ENST00000365529 113 ntBASIC2.63□□□□□ -1.99
VGFO15240 RNU1-119P-201ENST00000391122 165 ntBASIC2.63□□□□□ -1.99
VGFO15240 AL356379.1-201ENST00000414105 126 ntBASIC2.63□□□□□ -1.99
VGFO15240 AC244098.3-201ENST00000424803 96 ntBASIC2.63□□□□□ -1.99
VGFO15240 HMGN2P19-201ENST00000425149 265 ntBASIC2.63□□□□□ -1.99
VGFO15240 SNORD13-201ENST00000459299 104 ntBASIC2.63□□□□□ -1.99
VGFO15240 MIR3198-2-201ENST00000577868 80 ntBASIC2.63□□□□□ -1.99
VGFO15240 MIR4804-201ENST00000581683 73 ntBASIC2.63□□□□□ -1.99
VGFO15240 MIR9-2-201ENST00000384838 87 ntBASIC2.62□□□□□ -1.99
VGFO15240 MIR100-201ENST00000385259 80 ntBASIC2.62□□□□□ -1.99
VGFO15240 RNU7-21P-201ENST00000459430 62 ntBASIC2.61□□□□□ -1.99
VGFO15240 RNU6-1053P-201ENST00000515930 101 ntBASIC2.61□□□□□ -1.99
VGFO15240 RNU1-40P-201ENST00000516816 164 ntBASIC2.61□□□□□ -1.99
VGFO15240 RNU1-97P-201ENST00000516872 164 ntBASIC2.61□□□□□ -1.99
VGFO15240 AL157834.3-201ENST00000615543 103 ntBASIC2.61□□□□□ -1.99
VGFO15240 MIR7111-201ENST00000619751 72 ntBASIC2.61□□□□□ -1.99
VGFO15240 uc_338.20-201ENST00000621563 178 ntBASIC2.61□□□□□ -1.99
VGFO15240 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
VGFO15240 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
VGFO15240 Y_RNA.258-201ENST00000364613 105 ntBASIC2.6□□□□□ -1.99
VGFO15240 SNORA80D-201ENST00000384488 135 ntBASIC2.6□□□□□ -1.99
VGFO15240 AL691482.2-201ENST00000457453 84 ntBASIC2.6□□□□□ -1.99
VGFO15240 snoU13.31-201ENST00000607291 104 ntBASIC2.6□□□□□ -1.99
VGFO15240 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
VGFO15240 MIR676-201ENST00000390702 67 ntBASIC2.59□□□□□ -1.99
VGFO15240 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -2
VGFO15240 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.58□□□□□ -2
VGFO15240 MIR378A-201ENST00000362177 66 ntBASIC2.58□□□□□ -2
VGFO15240 Y_RNA.164-201ENST00000363709 102 ntBASIC2.58□□□□□ -2
VGFO15240 RNU7-56P-201ENST00000458744 62 ntBASIC2.58□□□□□ -2
VGFO15240 RNU7-90P-201ENST00000459216 62 ntBASIC2.58□□□□□ -2
VGFO15240 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.58□□□□□ -2
VGFO15240 MIR8081-201ENST00000611533 95 ntBASIC2.58□□□□□ -2
VGFO15240 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
VGFO15240 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
VGFO15240 MIR1-1-201ENST00000362147 71 ntBASIC2.57□□□□□ -2
VGFO15240 RNU6-369P-201ENST00000362515 102 ntBASIC2.57□□□□□ -2
VGFO15240 SNORD115-24-201ENST00000363528 82 ntBASIC2.57□□□□□ -2
VGFO15240 SNORD116-24-201ENST00000384549 92 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 191.9 ms