Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 SNORD115-19-201ENST00000363098 82 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 SNORD115-18-201ENST00000363293 82 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 RNY1P11-201ENST00000363759 113 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 SNORD115-17-201ENST00000364612 82 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 Y_RNA.292-201ENST00000364904 97 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 MIRLET7B-201ENST00000385140 83 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 RNU6-935P-201ENST00000410371 100 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 snoU13.11-201ENST00000459219 104 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 MIR4795-201ENST00000584182 89 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 MIR6086-201ENST00000638065 55 ntBASIC-1.26□□□□□ -2.61
SDCBPO00560 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 RNU6-309P-201ENST00000364573 106 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 RNU6-275P-201ENST00000364910 107 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 Y_RNA.419-201ENST00000384041 102 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 RNU6-474P-201ENST00000384243 107 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 RNU6-274P-201ENST00000459566 107 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 MIR4308-201ENST00000580634 81 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 snoR1.1-201ENST00000628177 80 ntBASIC-1.27□□□□□ -2.61
SDCBPO00560 MIR451A-201ENST00000385059 72 ntBASIC-1.28□□□□□ -2.61
SDCBPO00560 Y_RNA.584-201ENST00000391090 114 ntBASIC-1.28□□□□□ -2.61
SDCBPO00560 SNORD18.2-201ENST00000459604 70 ntBASIC-1.28□□□□□ -2.61
SDCBPO00560 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.28□□□□□ -2.61
SDCBPO00560 AL137067.1-201ENST00000615933 120 ntBASIC-1.28□□□□□ -2.61
SDCBPO00560 U6.106-201ENST00000636360 105 ntBASIC-1.28□□□□□ -2.61
SDCBPO00560 MIR335-201ENST00000362173 94 ntBASIC-1.29□□□□□ -2.62
SDCBPO00560 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.29□□□□□ -2.62
SDCBPO00560 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.29□□□□□ -2.62
SDCBPO00560 RNU6-466P-201ENST00000391224 103 ntBASIC-1.29□□□□□ -2.62
SDCBPO00560 MIR548G-201ENST00000408442 89 ntBASIC-1.29□□□□□ -2.62
SDCBPO00560 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.29□□□□□ -2.62
SDCBPO00560 Y_RNA.158-201ENST00000363651 101 ntBASIC-1.3□□□□□ -2.62
SDCBPO00560 SNORD114-4-201ENST00000363962 75 ntBASIC-1.3□□□□□ -2.62
SDCBPO00560 SNORD114-17-201ENST00000364699 75 ntBASIC-1.3□□□□□ -2.62
SDCBPO00560 RNY4P3-201ENST00000365254 95 ntBASIC-1.3□□□□□ -2.62
SDCBPO00560 MIR124-2-201ENST00000385081 109 ntBASIC-1.3□□□□□ -2.62
SDCBPO00560 Y_RNA.512-201ENST00000384518 102 ntBASIC-1.31□□□□□ -2.62
SDCBPO00560 RNU6-588P-201ENST00000410281 105 ntBASIC-1.31□□□□□ -2.62
SDCBPO00560 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.31□□□□□ -2.62
SDCBPO00560 Y_RNA.686-201ENST00000516548 134 ntBASIC-1.31□□□□□ -2.62
SDCBPO00560 RNU6-1137P-201ENST00000517073 99 ntBASIC-1.31□□□□□ -2.62
SDCBPO00560 MIR378F-201ENST00000578143 78 ntBASIC-1.31□□□□□ -2.62
SDCBPO00560 MIR4680-201ENST00000580906 66 ntBASIC-1.31□□□□□ -2.62
SDCBPO00560 RNU6-90P-201ENST00000606352 106 ntBASIC-1.31□□□□□ -2.62
SDCBPO00560 RNU6-1283P-201ENST00000365314 105 ntBASIC-1.32□□□□□ -2.62
SDCBPO00560 SNORA75.5-201ENST00000391291 81 ntBASIC-1.32□□□□□ -2.62
SDCBPO00560 SNORA7.5-201ENST00000410672 110 ntBASIC-1.32□□□□□ -2.62
SDCBPO00560 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-1.32□□□□□ -2.62
SDCBPO00560 RNA5SP470-201ENST00000516463 106 ntBASIC-1.32□□□□□ -2.62
SDCBPO00560 RNU6-988P-201ENST00000519081 107 ntBASIC-1.32□□□□□ -2.62
SDCBPO00560 MTND4P29-201ENST00000503122 1372 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 RNU6-1313P-201ENST00000362622 102 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 Y_RNA.83-201ENST00000363005 113 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 Y_RNA.277-201ENST00000364754 102 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 RNY4P28-201ENST00000365281 93 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 Y_RNA.483-201ENST00000384380 101 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 MT-TW-201ENST00000387382 68 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 MTND1P19-201ENST00000511780 315 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 RNU6-75P-201ENST00000515944 104 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 RNU6-719P-201ENST00000516671 104 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 AC021753.1-201ENST00000635724 168 ntBASIC-1.33□□□□□ -2.62
SDCBPO00560 Y_RNA.75-201ENST00000362927 97 ntBASIC-1.34□□□□□ -2.62
SDCBPO00560 SNORD38.1-201ENST00000363863 68 ntBASIC-1.34□□□□□ -2.62
SDCBPO00560 RNU6-647P-201ENST00000364243 107 ntBASIC-1.34□□□□□ -2.62
SDCBPO00560 SNORA63.6-201ENST00000364921 119 ntBASIC-1.34□□□□□ -2.62
SDCBPO00560 RNU6-1009P-201ENST00000390996 107 ntBASIC-1.34□□□□□ -2.62
SDCBPO00560 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-1.34□□□□□ -2.62
SDCBPO00560 Y_RNA.690-201ENST00000516603 95 ntBASIC-1.34□□□□□ -2.62
SDCBPO00560 RNU4-40P-201ENST00000364351 143 ntBASIC-1.35□□□□□ -2.63
SDCBPO00560 Y_RNA.505-201ENST00000384489 102 ntBASIC-1.35□□□□□ -2.63
SDCBPO00560 U3.27-201ENST00000391237 200 ntBASIC-1.35□□□□□ -2.63
SDCBPO00560 snoU83B.1-201ENST00000517136 88 ntBASIC-1.35□□□□□ -2.63
SDCBPO00560 MIR4464-201ENST00000580818 92 ntBASIC-1.35□□□□□ -2.63
SDCBPO00560 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.35□□□□□ -2.63
SDCBPO00560 AL512310.12-203ENST00000640543 90 ntBASIC-1.35□□□□□ -2.63
SDCBPO00560 Y_RNA.619-201ENST00000410951 90 ntBASIC-1.36□□□□□ -2.63
SDCBPO00560 MIR3163-201ENST00000581592 73 ntBASIC-1.36□□□□□ -2.63
SDCBPO00560 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.37□□□□□ -2.63
SDCBPO00560 Y_RNA.216-201ENST00000364205 93 ntBASIC-1.37□□□□□ -2.63
SDCBPO00560 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.37□□□□□ -2.63
SDCBPO00560 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC-1.37□□□□□ -2.63
SDCBPO00560 RNY1P9-201ENST00000532431 109 ntBASIC-1.37□□□□□ -2.63
SDCBPO00560 AC090617.8-201ENST00000623339 167 ntBASIC-1.37□□□□□ -2.63
SDCBPO00560 MIR6844-201ENST00000637122 62 ntBASIC-1.37□□□□□ -2.63
SDCBPO00560 RNU6-990P-201ENST00000364385 104 ntBASIC-1.38□□□□□ -2.63
SDCBPO00560 Y_RNA.352-201ENST00000365439 102 ntBASIC-1.38□□□□□ -2.63
SDCBPO00560 SNORD18B-201ENST00000365659 72 ntBASIC-1.38□□□□□ -2.63
SDCBPO00560 RNU6-30P-201ENST00000384561 107 ntBASIC-1.38□□□□□ -2.63
SDCBPO00560 SNORD127-201ENST00000458892 86 ntBASIC-1.38□□□□□ -2.63
SDCBPO00560 FGF7P7-201ENST00000514120 227 ntBASIC-1.38□□□□□ -2.63
SDCBPO00560 RNU5E-3P-201ENST00000515913 68 ntBASIC-1.38□□□□□ -2.63
SDCBPO00560 YWHAEP3-201ENST00000582767 121 ntBASIC-1.38□□□□□ -2.63
SDCBPO00560 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.39□□□□□ -2.63
SDCBPO00560 RNU6-208P-201ENST00000362431 107 ntBASIC-1.39□□□□□ -2.63
SDCBPO00560 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.39□□□□□ -2.63
SDCBPO00560 SNORA62.4-201ENST00000365504 151 ntBASIC-1.39□□□□□ -2.63
SDCBPO00560 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.39□□□□□ -2.63
SDCBPO00560 MIR759-201ENST00000390224 91 ntBASIC-1.39□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 168.9 ms