Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 MIR302D-201ENST00000362275 68 ntBASIC2□□□□□ -2.09
SPDYE3A6NKU9 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2□□□□□ -2.09
SPDYE3A6NKU9 AC097635.1-201ENST00000450678 155 ntBASIC2□□□□□ -2.09
SPDYE3A6NKU9 snoU13.9-201ENST00000458927 103 ntBASIC2□□□□□ -2.09
SPDYE3A6NKU9 MIR4511-201ENST00000582784 87 ntBASIC2□□□□□ -2.09
SPDYE3A6NKU9 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 RNU6-1265P-201ENST00000516342 103 ntBASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 AC019176.1-201ENST00000518519 225 ntBASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 MIR3122-201ENST00000577243 73 ntBASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 RNU7-10P-201ENST00000607194 63 ntBASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 MIR8081-201ENST00000611533 95 ntBASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 MIR8053-201ENST00000613344 75 ntBASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SPDYE3A6NKU9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.98□□□□□ -2.09
SPDYE3A6NKU9 MIR30A-201ENST00000385092 71 ntBASIC1.98□□□□□ -2.09
SPDYE3A6NKU9 HMGN2P19-201ENST00000425149 265 ntBASIC1.98□□□□□ -2.09
SPDYE3A6NKU9 MIR4771-2-201ENST00000577758 74 ntBASIC1.98□□□□□ -2.09
SPDYE3A6NKU9 MIR4771-1-201ENST00000582617 74 ntBASIC1.98□□□□□ -2.09
SPDYE3A6NKU9 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
SPDYE3A6NKU9 RNU6-1187P-201ENST00000364771 110 ntBASIC1.97□□□□□ -2.09
SPDYE3A6NKU9 SNORD1A-201ENST00000364968 72 ntBASIC1.97□□□□□ -2.09
SPDYE3A6NKU9 Y_RNA.330-201ENST00000365230 109 ntBASIC1.97□□□□□ -2.09
SPDYE3A6NKU9 RNU6-1177P-201ENST00000391058 104 ntBASIC1.97□□□□□ -2.09
SPDYE3A6NKU9 SNORA40.6-201ENST00000391153 128 ntBASIC1.97□□□□□ -2.09
SPDYE3A6NKU9 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.97□□□□□ -2.09
SPDYE3A6NKU9 AC110620.1-201ENST00000416042 228 ntBASIC1.97□□□□□ -2.09
SPDYE3A6NKU9 MIR502-201ENST00000606349 86 ntBASIC1.97□□□□□ -2.09
SPDYE3A6NKU9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
SPDYE3A6NKU9 RNU6-141P-201ENST00000410499 105 ntBASIC1.96□□□□□ -2.1
SPDYE3A6NKU9 RNU6-287P-201ENST00000516230 98 ntBASIC1.96□□□□□ -2.1
SPDYE3A6NKU9 AL645939.4-201ENST00000604495 135 ntBASIC1.96□□□□□ -2.1
SPDYE3A6NKU9 AL353997.5-201ENST00000618886 171 ntBASIC1.96□□□□□ -2.1
SPDYE3A6NKU9 RNU6-934P-201ENST00000365154 107 ntBASIC1.95□□□□□ -2.1
SPDYE3A6NKU9 AC244098.3-201ENST00000424803 96 ntBASIC1.95□□□□□ -2.1
SPDYE3A6NKU9 AC079150.2-201ENST00000443733 78 ntBASIC1.95□□□□□ -2.1
SPDYE3A6NKU9 SNORA44.1-201ENST00000517031 108 ntBASIC1.95□□□□□ -2.1
SPDYE3A6NKU9 AL078603.1-201ENST00000603824 313 ntBASIC1.95□□□□□ -2.1
SPDYE3A6NKU9 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
SPDYE3A6NKU9 RNA5SP190-201ENST00000365222 118 ntBASIC1.94□□□□□ -2.1
SPDYE3A6NKU9 RNU6-535P-201ENST00000384722 107 ntBASIC1.94□□□□□ -2.1
SPDYE3A6NKU9 RNU6-165P-201ENST00000517170 99 ntBASIC1.94□□□□□ -2.1
SPDYE3A6NKU9 AC103706.3-201ENST00000636297 85 ntBASIC1.94□□□□□ -2.1
SPDYE3A6NKU9 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 RNU1-17P-201ENST00000363022 152 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 RNA5SP99-201ENST00000364020 114 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 MIR203A-201ENST00000384836 110 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 MIR125B2-201ENST00000385128 89 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 RNU6-274P-201ENST00000459566 107 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 AC079140.2-201ENST00000506193 142 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 RNU6-977P-201ENST00000516411 103 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 AC138907.6-201ENST00000568401 126 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 AC138869.1-201ENST00000568623 124 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 MIR4255-201ENST00000579351 72 ntBASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SPDYE3A6NKU9 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 RNU6-614P-201ENST00000384369 107 ntBASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 MIR676-201ENST00000390702 67 ntBASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 RNU7-40P-201ENST00000516397 64 ntBASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 RNU6-765P-201ENST00000516916 99 ntBASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 AC036111.3-201ENST00000526389 112 ntBASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 NAMPTP3-201ENST00000569273 224 ntBASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 U6.59-201ENST00000615686 107 ntBASIC1.92□□□□□ -2.1
SPDYE3A6NKU9 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.91□□□□□ -2.1
SPDYE3A6NKU9 SNORD13-201ENST00000459299 104 ntBASIC1.91□□□□□ -2.1
SPDYE3A6NKU9 Y_RNA.676-201ENST00000516393 96 ntBASIC1.91□□□□□ -2.1
SPDYE3A6NKU9 AC023827.1-201ENST00000569247 97 ntBASIC1.91□□□□□ -2.1
SPDYE3A6NKU9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 SNORA75.2-201ENST00000391138 150 ntBASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 SNORA75.3-201ENST00000391231 150 ntBASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 AL691482.2-201ENST00000457453 84 ntBASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 RNA5SP458-201ENST00000516188 119 ntBASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 MIR548AG2-201ENST00000581228 64 ntBASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 AC008608.1-201ENST00000603910 127 ntBASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
SPDYE3A6NKU9 SNORD33-201ENST00000362761 85 ntBASIC1.89□□□□□ -2.11
SPDYE3A6NKU9 AC048334.1-201ENST00000477975 159 ntBASIC1.89□□□□□ -2.11
SPDYE3A6NKU9 RNU6-1057P-201ENST00000517162 102 ntBASIC1.89□□□□□ -2.11
SPDYE3A6NKU9 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.89□□□□□ -2.11
SPDYE3A6NKU9 MIR3664-201ENST00000579074 99 ntBASIC1.89□□□□□ -2.11
SPDYE3A6NKU9 MIR3937-201ENST00000580135 106 ntBASIC1.89□□□□□ -2.11
SPDYE3A6NKU9 MIR4676-201ENST00000583078 72 ntBASIC1.89□□□□□ -2.11
SPDYE3A6NKU9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.89□□□□□ -2.11
SPDYE3A6NKU9 RNU6-829P-201ENST00000363700 112 ntBASIC1.88□□□□□ -2.11
SPDYE3A6NKU9 SNORD48-201ENST00000364953 64 ntBASIC1.88□□□□□ -2.11
SPDYE3A6NKU9 RNU6-1065P-201ENST00000384513 106 ntBASIC1.88□□□□□ -2.11
SPDYE3A6NKU9 MIR3198-2-201ENST00000577868 80 ntBASIC1.88□□□□□ -2.11
SPDYE3A6NKU9 AC069503.3-201ENST00000618674 145 ntBASIC1.88□□□□□ -2.11
SPDYE3A6NKU9 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
SPDYE3A6NKU9 SNORD113.3-201ENST00000364630 78 ntBASIC1.87□□□□□ -2.11
SPDYE3A6NKU9 RNU7-102P-201ENST00000458948 62 ntBASIC1.87□□□□□ -2.11
SPDYE3A6NKU9 RNU6-1079P-201ENST00000362861 110 ntBASIC1.86□□□□□ -2.11
SPDYE3A6NKU9 Y_RNA.363-201ENST00000365529 113 ntBASIC1.86□□□□□ -2.11
SPDYE3A6NKU9 RNU6-669P-201ENST00000365575 107 ntBASIC1.86□□□□□ -2.11
SPDYE3A6NKU9 RNU6-369P-201ENST00000362515 102 ntBASIC1.85□□□□□ -2.11
SPDYE3A6NKU9 RNU6-364P-201ENST00000384387 107 ntBASIC1.85□□□□□ -2.11
SPDYE3A6NKU9 RPS26P5-201ENST00000418544 335 ntBASIC1.85□□□□□ -2.11
SPDYE3A6NKU9 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 247.9 ms