Protein–RNA interactions for Protein: A0A0B4J271

TRAV12-3, T-cell receptor alpha variable 12-3 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-3A0A0B4J271 RNU6-521P-201ENST00000516663 105 ntBASIC-2.28□□□□□ -2.77
TRAV12-3A0A0B4J271 SNORA20.3-201ENST00000516880 132 ntBASIC-2.28□□□□□ -2.77
TRAV12-3A0A0B4J271 RNU4-17P-201ENST00000365598 141 ntBASIC-2.29□□□□□ -2.78
TRAV12-3A0A0B4J271 SNORD115-46-201ENST00000390982 71 ntBASIC-2.29□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.581-201ENST00000391017 97 ntBASIC-2.29□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.613-201ENST00000410726 97 ntBASIC-2.29□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-118P-201ENST00000516552 102 ntBASIC-2.29□□□□□ -2.78
TRAV12-3A0A0B4J271 AC037487.3-201ENST00000606668 112 ntBASIC-2.29□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.41-201ENST00000362646 102 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 SNORD81.2-201ENST00000365153 76 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.461-201ENST00000384263 103 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-1052P-201ENST00000411398 104 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.635-201ENST00000459041 101 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-719P-201ENST00000516671 104 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 MIR3611-201ENST00000584484 83 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-2.3□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.441-201ENST00000384123 112 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-80P-201ENST00000384195 107 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.474-201ENST00000384341 102 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-1109P-201ENST00000391187 107 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-381P-201ENST00000391259 108 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 AC113618.1-201ENST00000416747 285 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 MTND3P22-201ENST00000510932 243 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 SNORD116.3-201ENST00000517176 78 ntBASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.31□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.5-201ENST00000362334 102 ntBASIC-2.32□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.528-201ENST00000384575 108 ntBASIC-2.32□□□□□ -2.78
TRAV12-3A0A0B4J271 MIR1255B2-201ENST00000408618 67 ntBASIC-2.32□□□□□ -2.78
TRAV12-3A0A0B4J271 AC090616.4-201ENST00000448026 115 ntBASIC-2.32□□□□□ -2.78
TRAV12-3A0A0B4J271 FGF7P7-201ENST00000514120 227 ntBASIC-2.32□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-90P-201ENST00000606352 106 ntBASIC-2.32□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.39-201ENST00000362620 98 ntBASIC-2.33□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU4-24P-201ENST00000364565 139 ntBASIC-2.33□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.445-201ENST00000384168 102 ntBASIC-2.33□□□□□ -2.78
TRAV12-3A0A0B4J271 MIR548G-201ENST00000408442 89 ntBASIC-2.33□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-119P-201ENST00000364882 107 ntBASIC-2.34□□□□□ -2.78
TRAV12-3A0A0B4J271 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.34□□□□□ -2.78
TRAV12-3A0A0B4J271 MTND4P17-201ENST00000470444 350 ntBASIC-2.34□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-314P-201ENST00000516574 104 ntBASIC-2.34□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-980P-201ENST00000516925 103 ntBASIC-2.34□□□□□ -2.78
TRAV12-3A0A0B4J271 MIR4490-201ENST00000582647 84 ntBASIC-2.34□□□□□ -2.78
TRAV12-3A0A0B4J271 AL606534.2-204ENST00000635008 178 ntBASIC-2.34□□□□□ -2.78
TRAV12-3A0A0B4J271 RNU6-79P-201ENST00000362511 107 ntBASIC-2.35□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU6-1289P-201ENST00000384431 106 ntBASIC-2.35□□□□□ -2.79
TRAV12-3A0A0B4J271 AL121914.1-201ENST00000450188 156 ntBASIC-2.35□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU6-75P-201ENST00000515944 104 ntBASIC-2.35□□□□□ -2.79
TRAV12-3A0A0B4J271 SNORD58B-201ENST00000607313 66 ntBASIC-2.35□□□□□ -2.79
TRAV12-3A0A0B4J271 FAS-AS1.1-201ENST00000615327 126 ntBASIC-2.35□□□□□ -2.79
TRAV12-3A0A0B4J271 AC104985.2-201ENST00000620598 500 ntBASIC-2.35□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.9-201ENST00000362354 101 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 RNA5SP405-201ENST00000363059 114 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 SNORA15B-2-201ENST00000384058 135 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.463-201ENST00000384271 102 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 SNORA15B-1-201ENST00000384334 135 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.558-201ENST00000384685 113 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.573-201ENST00000384763 105 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU6-1234P-201ENST00000516877 103 ntBASIC-2.36□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.496-201ENST00000384444 101 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 MIR548A1-201ENST00000385041 97 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 AC018880.2-201ENST00000414265 201 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU7-24P-201ENST00000458867 62 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU6-506P-201ENST00000516553 94 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 AP002795.1-201ENST00000534879 84 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 AC025253.1-201ENST00000613623 543 ntBASIC-2.37□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU6-103P-201ENST00000363686 107 ntBASIC-2.38□□□□□ -2.79
TRAV12-3A0A0B4J271 SNORD38.1-201ENST00000363863 68 ntBASIC-2.38□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.183-201ENST00000363882 113 ntBASIC-2.38□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU6-1040P-201ENST00000383974 107 ntBASIC-2.38□□□□□ -2.79
TRAV12-3A0A0B4J271 MIR181A1-201ENST00000385026 110 ntBASIC-2.38□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU6-1238P-201ENST00000517215 102 ntBASIC-2.38□□□□□ -2.79
TRAV12-3A0A0B4J271 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-2.38□□□□□ -2.79
TRAV12-3A0A0B4J271 SNORA33.1-201ENST00000364957 130 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.348-201ENST00000365403 103 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.491-201ENST00000384417 107 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 MIR496-201ENST00000385226 102 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 RPL35AP4-201ENST00000412007 102 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 FGF7P4-201ENST00000509595 295 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 CYP3A54P-201ENST00000566950 75 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 MIR3139-201ENST00000579145 76 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 MIR5683-201ENST00000636514 76 ntBASIC-2.39□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.4□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.31-201ENST00000362574 102 ntBASIC-2.4□□□□□ -2.79
TRAV12-3A0A0B4J271 SNORA63.2-201ENST00000362603 126 ntBASIC-2.4□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU1-115P-201ENST00000365329 160 ntBASIC-2.4□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.4□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.4□□□□□ -2.79
TRAV12-3A0A0B4J271 MTATP6P21-201ENST00000440681 189 ntBASIC-2.4□□□□□ -2.79
TRAV12-3A0A0B4J271 RNU7-30P-201ENST00000516835 62 ntBASIC-2.4□□□□□ -2.79
TRAV12-3A0A0B4J271 Y_RNA.80-201ENST00000362996 102 ntBASIC-2.41□□□□□ -2.8
TRAV12-3A0A0B4J271 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.41□□□□□ -2.8
Retrieved 100 of 98,524 protein–RNA pairs in 234.5 ms