Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
PCDHGA11Q9Y5H2 RNY4P3-201ENST00000365254 95 ntBASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 SNORD12-201ENST00000391002 90 ntBASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU1-119P-201ENST00000391122 165 ntBASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 RPL23AP94-201ENST00000512518 302 ntBASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU7-102P-201ENST00000458948 62 ntBASIC1.86□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU1-41P-201ENST00000516161 162 ntBASIC1.86□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6-1108P-201ENST00000516308 104 ntBASIC1.86□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU1-48P-201ENST00000516400 162 ntBASIC1.86□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR4804-201ENST00000581683 73 ntBASIC1.86□□□□□ -2.11
PCDHGA11Q9Y5H2 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.86□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6-664P-201ENST00000362381 107 ntBASIC1.85□□□□□ -2.11
PCDHGA11Q9Y5H2 SNORD101-201ENST00000384027 73 ntBASIC1.85□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR889-201ENST00000401280 79 ntBASIC1.85□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR3122-201ENST00000577243 73 ntBASIC1.85□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR4648-201ENST00000580107 72 ntBASIC1.85□□□□□ -2.11
PCDHGA11Q9Y5H2 AC008608.1-201ENST00000603910 127 ntBASIC1.85□□□□□ -2.11
PCDHGA11Q9Y5H2 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6-208P-201ENST00000362431 107 ntBASIC1.84□□□□□ -2.11
PCDHGA11Q9Y5H2 RNU6-291P-201ENST00000384720 107 ntBASIC1.84□□□□□ -2.11
PCDHGA11Q9Y5H2 Y_RNA.596-201ENST00000410462 109 ntBASIC1.84□□□□□ -2.11
PCDHGA11Q9Y5H2 AL359821.1-201ENST00000605519 182 ntBASIC1.84□□□□□ -2.11
PCDHGA11Q9Y5H2 MIR222-201ENST00000384992 110 ntBASIC1.83□□□□□ -2.12
PCDHGA11Q9Y5H2 RNU7-56P-201ENST00000458744 62 ntBASIC1.83□□□□□ -2.12
PCDHGA11Q9Y5H2 RNU6-807P-201ENST00000516805 107 ntBASIC1.83□□□□□ -2.12
PCDHGA11Q9Y5H2 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
PCDHGA11Q9Y5H2 RNU5F-1-201ENST00000362507 117 ntBASIC1.82□□□□□ -2.12
PCDHGA11Q9Y5H2 AL606490.4-201ENST00000423117 127 ntBASIC1.82□□□□□ -2.12
PCDHGA11Q9Y5H2 FAS-AS1.1-201ENST00000615327 126 ntBASIC1.82□□□□□ -2.12
PCDHGA11Q9Y5H2 MIR1297-201ENST00000637311 77 ntBASIC1.82□□□□□ -2.12
PCDHGA11Q9Y5H2 SNORA70B-201ENST00000384210 135 ntBASIC1.81□□□□□ -2.12
PCDHGA11Q9Y5H2 Y_RNA.545-201ENST00000384652 105 ntBASIC1.81□□□□□ -2.12
PCDHGA11Q9Y5H2 MIR520F-201ENST00000384824 87 ntBASIC1.81□□□□□ -2.12
PCDHGA11Q9Y5H2 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.81□□□□□ -2.12
PCDHGA11Q9Y5H2 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
PCDHGA11Q9Y5H2 MIR4696-201ENST00000581431 70 ntBASIC1.81□□□□□ -2.12
PCDHGA11Q9Y5H2 Y_RNA.174-201ENST00000363781 105 ntBASIC1.8□□□□□ -2.12
PCDHGA11Q9Y5H2 RNU6-1229P-201ENST00000364295 107 ntBASIC1.8□□□□□ -2.12
PCDHGA11Q9Y5H2 RNU6-1051P-201ENST00000365471 102 ntBASIC1.8□□□□□ -2.12
PCDHGA11Q9Y5H2 AC244505.6-201ENST00000452829 130 ntBASIC1.8□□□□□ -2.12
PCDHGA11Q9Y5H2 MIR4285-201ENST00000581001 85 ntBASIC1.8□□□□□ -2.12
PCDHGA11Q9Y5H2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
PCDHGA11Q9Y5H2 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
PCDHGA11Q9Y5H2 RNU6-369P-201ENST00000362515 102 ntBASIC1.79□□□□□ -2.12
PCDHGA11Q9Y5H2 SNORA16.1-201ENST00000364597 132 ntBASIC1.79□□□□□ -2.12
PCDHGA11Q9Y5H2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.79□□□□□ -2.12
PCDHGA11Q9Y5H2 MIR4781-201ENST00000585250 76 ntBASIC1.79□□□□□ -2.12
PCDHGA11Q9Y5H2 MTRNR2L2-201ENST00000604882 87 ntBASIC1.79□□□□□ -2.12
PCDHGA11Q9Y5H2 AL136317.1-201ENST00000612653 226 ntBASIC1.79□□□□□ -2.12
PCDHGA11Q9Y5H2 U6.100-201ENST00000636230 99 ntBASIC1.79□□□□□ -2.12
PCDHGA11Q9Y5H2 RNA5SP245-201ENST00000364239 121 ntBASIC1.78□□□□□ -2.12
PCDHGA11Q9Y5H2 MIR1827-201ENST00000408549 66 ntBASIC1.78□□□□□ -2.12
PCDHGA11Q9Y5H2 RNA5SP182-201ENST00000516064 82 ntBASIC1.78□□□□□ -2.12
PCDHGA11Q9Y5H2 RNU6-1057P-201ENST00000517162 102 ntBASIC1.78□□□□□ -2.12
PCDHGA11Q9Y5H2 MIR4298-201ENST00000584380 73 ntBASIC1.78□□□□□ -2.12
PCDHGA11Q9Y5H2 AL157834.3-201ENST00000615543 103 ntBASIC1.78□□□□□ -2.12
PCDHGA11Q9Y5H2 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
PCDHGA11Q9Y5H2 Y_RNA.565-201ENST00000384719 101 ntBASIC1.77□□□□□ -2.13
PCDHGA11Q9Y5H2 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC1.77□□□□□ -2.13
PCDHGA11Q9Y5H2 YWHAEP2-201ENST00000580066 112 ntBASIC1.77□□□□□ -2.13
PCDHGA11Q9Y5H2 YWHAEP3-201ENST00000582767 121 ntBASIC1.77□□□□□ -2.13
PCDHGA11Q9Y5H2 DLEU2_3.1-201ENST00000620005 73 ntBASIC1.77□□□□□ -2.13
PCDHGA11Q9Y5H2 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PCDHGA11Q9Y5H2 SNORD115-44-201ENST00000365391 82 ntBASIC1.76□□□□□ -2.13
PCDHGA11Q9Y5H2 RNU6-935P-201ENST00000410371 100 ntBASIC1.76□□□□□ -2.13
PCDHGA11Q9Y5H2 AC002429.1-201ENST00000437672 148 ntBASIC1.76□□□□□ -2.13
PCDHGA11Q9Y5H2 RNU6-1265P-201ENST00000516342 103 ntBASIC1.76□□□□□ -2.13
PCDHGA11Q9Y5H2 SNORD48-201ENST00000364953 64 ntBASIC1.75□□□□□ -2.13
PCDHGA11Q9Y5H2 SNORA25-201ENST00000384384 134 ntBASIC1.75□□□□□ -2.13
PCDHGA11Q9Y5H2 RNU6-303P-201ENST00000517091 106 ntBASIC1.75□□□□□ -2.13
PCDHGA11Q9Y5H2 Y_RNA.12-201ENST00000362393 112 ntBASIC1.74□□□□□ -2.13
PCDHGA11Q9Y5H2 Y_RNA.207-201ENST00000364142 106 ntBASIC1.74□□□□□ -2.13
PCDHGA11Q9Y5H2 MIR4419B-201ENST00000577260 68 ntBASIC1.74□□□□□ -2.13
PCDHGA11Q9Y5H2 SNORD114-1-201ENST00000362705 72 ntBASIC1.73□□□□□ -2.13
PCDHGA11Q9Y5H2 MIR520H-201ENST00000385126 88 ntBASIC1.73□□□□□ -2.13
PCDHGA11Q9Y5H2 SNORD90-201ENST00000391145 111 ntBASIC1.73□□□□□ -2.13
PCDHGA11Q9Y5H2 SNORA40.18-201ENST00000391200 128 ntBASIC1.73□□□□□ -2.13
PCDHGA11Q9Y5H2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.73□□□□□ -2.13
PCDHGA11Q9Y5H2 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
PCDHGA11Q9Y5H2 FABP5P4-201ENST00000437203 171 ntBASIC1.72□□□□□ -2.13
PCDHGA11Q9Y5H2 MIR3945-201ENST00000581853 98 ntBASIC1.72□□□□□ -2.13
PCDHGA11Q9Y5H2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.72□□□□□ -2.13
PCDHGA11Q9Y5H2 RMST_2.1-201ENST00000617263 136 ntBASIC1.72□□□□□ -2.13
PCDHGA11Q9Y5H2 uc_338.16-201ENST00000621804 95 ntBASIC1.72□□□□□ -2.13
PCDHGA11Q9Y5H2 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
PCDHGA11Q9Y5H2 RNU6-681P-201ENST00000364012 104 ntBASIC1.71□□□□□ -2.14
PCDHGA11Q9Y5H2 RNU6-411P-201ENST00000384451 107 ntBASIC1.71□□□□□ -2.14
PCDHGA11Q9Y5H2 MIR583-201ENST00000384846 75 ntBASIC1.71□□□□□ -2.14
PCDHGA11Q9Y5H2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PCDHGA11Q9Y5H2 snoU13.17-201ENST00000458802 104 ntBASIC1.71□□□□□ -2.14
PCDHGA11Q9Y5H2 Y_RNA.681-201ENST00000516445 113 ntBASIC1.71□□□□□ -2.14
PCDHGA11Q9Y5H2 SNORA31.14-201ENST00000516728 116 ntBASIC1.71□□□□□ -2.14
PCDHGA11Q9Y5H2 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PCDHGA11Q9Y5H2 RNA5SP117-201ENST00000365294 118 ntBASIC1.7□□□□□ -2.14
PCDHGA11Q9Y5H2 MIR451A-201ENST00000385059 72 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms