Protein–RNA interactions for Protein: Q9Y2R2

PTPN22, Tyrosine-protein phosphatase non-receptor type 22, humanhuman

Predictions only

Length 807 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22Q9Y2R2 RNU6-910P-201ENST00000390844 107 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 RNA5SP95-201ENST00000410319 137 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 RNU7-171P-201ENST00000459581 62 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 RNU6-267P-201ENST00000516714 103 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 AC019288.1-201ENST00000557918 224 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 MIR4491-201ENST00000581087 68 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 MIR3202-2-201ENST00000635980 79 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 MIR1245B-201ENST00000636115 69 ntBASIC1.48□□□□□ -2.17
PTPN22Q9Y2R2 MIR26B-201ENST00000362251 77 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 RNU4-58P-201ENST00000363192 141 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 RNU6-509P-201ENST00000363519 107 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 SNORD113.3-201ENST00000364630 78 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 RNU1-36P-201ENST00000365130 165 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 SNORA80D-201ENST00000384488 135 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 RNY1P4-201ENST00000384595 115 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 SNORD78.1-201ENST00000390866 65 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 Y_RNA.609-201ENST00000410669 89 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 RN7SL793P-201ENST00000583259 296 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.47□□□□□ -2.17
PTPN22Q9Y2R2 Y_RNA.57-201ENST00000362806 113 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 RNU6-1276P-201ENST00000365372 104 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 SNORA25-201ENST00000384384 134 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 SNORD93-201ENST00000408813 74 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 RNU4-83P-201ENST00000410863 133 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 AL591704.2-201ENST00000421658 181 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 RNU7-40P-201ENST00000516397 64 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 AC036111.3-201ENST00000526389 112 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 MIR7974-201ENST00000615835 79 ntBASIC1.46□□□□□ -2.18
PTPN22Q9Y2R2 RNA5SP327-201ENST00000362494 101 ntBASIC1.45□□□□□ -2.18
PTPN22Q9Y2R2 Y_RNA.73-201ENST00000362910 113 ntBASIC1.45□□□□□ -2.18
PTPN22Q9Y2R2 Y_RNA.426-201ENST00000384068 113 ntBASIC1.45□□□□□ -2.18
PTPN22Q9Y2R2 SNORA75.2-201ENST00000391138 150 ntBASIC1.45□□□□□ -2.18
PTPN22Q9Y2R2 SNORA75.3-201ENST00000391231 150 ntBASIC1.45□□□□□ -2.18
PTPN22Q9Y2R2 SNORD111-201ENST00000408139 94 ntBASIC1.45□□□□□ -2.18
PTPN22Q9Y2R2 RNU7-185P-201ENST00000459215 60 ntBASIC1.45□□□□□ -2.18
PTPN22Q9Y2R2 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.45□□□□□ -2.18
PTPN22Q9Y2R2 Y_RNA.178-201ENST00000363832 102 ntBASIC1.44□□□□□ -2.18
PTPN22Q9Y2R2 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.44□□□□□ -2.18
PTPN22Q9Y2R2 Y_RNA.648-201ENST00000459455 110 ntBASIC1.44□□□□□ -2.18
PTPN22Q9Y2R2 RNU6-765P-201ENST00000516916 99 ntBASIC1.44□□□□□ -2.18
PTPN22Q9Y2R2 MIR4666B-201ENST00000578142 81 ntBASIC1.44□□□□□ -2.18
PTPN22Q9Y2R2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.44□□□□□ -2.18
PTPN22Q9Y2R2 AC106800.4-201ENST00000614905 153 ntBASIC1.44□□□□□ -2.18
PTPN22Q9Y2R2 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.44□□□□□ -2.18
PTPN22Q9Y2R2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 Y_RNA.363-201ENST00000365529 113 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 SNORD12-201ENST00000391002 90 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 MIR1257-201ENST00000408490 117 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 BX276092.1-201ENST00000427368 251 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 RNU7-21P-201ENST00000459430 62 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 RNU6-531P-201ENST00000516694 104 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 SNORA25.16-201ENST00000516741 121 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 MIR548BB-201ENST00000626714 66 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 AC006160.2-201ENST00000637708 154 ntBASIC1.43□□□□□ -2.18
PTPN22Q9Y2R2 Y_RNA.330-201ENST00000365230 109 ntBASIC1.42□□□□□ -2.18
PTPN22Q9Y2R2 MIR519A1-201ENST00000385257 85 ntBASIC1.42□□□□□ -2.18
PTPN22Q9Y2R2 RNU6-955P-201ENST00000410497 104 ntBASIC1.42□□□□□ -2.18
PTPN22Q9Y2R2 AC087499.7-201ENST00000441958 109 ntBASIC1.42□□□□□ -2.18
PTPN22Q9Y2R2 RNA5SP395-201ENST00000516567 118 ntBASIC1.42□□□□□ -2.18
PTPN22Q9Y2R2 MIR5000-201ENST00000577717 103 ntBASIC1.42□□□□□ -2.18
PTPN22Q9Y2R2 AC023934.1-201ENST00000574529 2389 ntBASIC1.41□□□□□ -2.18
PTPN22Q9Y2R2 RNU6-934P-201ENST00000365154 107 ntBASIC1.41□□□□□ -2.18
PTPN22Q9Y2R2 RNU6-1254P-201ENST00000391266 104 ntBASIC1.41□□□□□ -2.18
PTPN22Q9Y2R2 RNU6-519P-201ENST00000410590 108 ntBASIC1.41□□□□□ -2.18
PTPN22Q9Y2R2 RNU7-90P-201ENST00000459216 62 ntBASIC1.41□□□□□ -2.18
PTPN22Q9Y2R2 RNU7-10P-201ENST00000607194 63 ntBASIC1.41□□□□□ -2.18
PTPN22Q9Y2R2 MIR6082-201ENST00000613604 109 ntBASIC1.41□□□□□ -2.18
PTPN22Q9Y2R2 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.41□□□□□ -2.18
PTPN22Q9Y2R2 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.4□□□□□ -2.18
PTPN22Q9Y2R2 SNORD36A-201ENST00000362874 73 ntBASIC1.4□□□□□ -2.19
PTPN22Q9Y2R2 MIR125B2-201ENST00000385128 89 ntBASIC1.4□□□□□ -2.19
PTPN22Q9Y2R2 Y_RNA.607-201ENST00000410597 98 ntBASIC1.4□□□□□ -2.19
PTPN22Q9Y2R2 SNORD4B-201ENST00000459083 72 ntBASIC1.4□□□□□ -2.19
PTPN22Q9Y2R2 snoU13.21-201ENST00000459368 105 ntBASIC1.4□□□□□ -2.19
PTPN22Q9Y2R2 SNORD79.1-201ENST00000516069 84 ntBASIC1.4□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-638P-201ENST00000516582 104 ntBASIC1.4□□□□□ -2.19
PTPN22Q9Y2R2 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC1.4□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-228P-201ENST00000362700 106 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-403P-201ENST00000363163 104 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-787P-201ENST00000384032 107 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-1124P-201ENST00000384169 107 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 MIR519C-201ENST00000385053 87 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 MIR216A-201ENST00000385063 110 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 MIR758-201ENST00000390227 88 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 Y_RNA.611-201ENST00000410682 108 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 SNORD83.1-201ENST00000411362 77 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 RPS26P5-201ENST00000418544 335 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 AC087343.1-201ENST00000477341 475 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 AC068338.1-201ENST00000565567 176 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 MIR548H5-201ENST00000580314 60 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 MIR4295-201ENST00000585286 85 ntBASIC1.39□□□□□ -2.19
PTPN22Q9Y2R2 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
PTPN22Q9Y2R2 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.38□□□□□ -2.19
PTPN22Q9Y2R2 Y_RNA.42-201ENST00000362660 108 ntBASIC1.38□□□□□ -2.19
PTPN22Q9Y2R2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.38□□□□□ -2.19
PTPN22Q9Y2R2 SNORA72.6-201ENST00000384520 129 ntBASIC1.38□□□□□ -2.19
PTPN22Q9Y2R2 RNU6-939P-201ENST00000384634 107 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 250.2 ms