Protein–RNA interactions for Protein: Q9Y239

NOD1, Nucleotide-binding oligomerization domain-containing protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1Q9Y239 SNORA16.1-201ENST00000364597 132 ntBASIC1.96□□□□□ -2.1
NOD1Q9Y239 SNORA67.5-201ENST00000391036 107 ntBASIC1.96□□□□□ -2.1
NOD1Q9Y239 AC092628.1-201ENST00000436250 252 ntBASIC1.96□□□□□ -2.1
NOD1Q9Y239 RNU7-90P-201ENST00000459216 62 ntBASIC1.96□□□□□ -2.1
NOD1Q9Y239 MIR4796-201ENST00000580742 81 ntBASIC1.96□□□□□ -2.1
NOD1Q9Y239 MIR4676-201ENST00000583078 72 ntBASIC1.96□□□□□ -2.1
NOD1Q9Y239 MIR4712-201ENST00000583750 82 ntBASIC1.96□□□□□ -2.1
NOD1Q9Y239 Y_RNA.221-201ENST00000364248 96 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 Y_RNA.226-201ENST00000364337 114 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 RNU6-364P-201ENST00000384387 107 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 RNU4-62P-201ENST00000410125 130 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 RNU6-994P-201ENST00000410507 111 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 HMGN2P38-201ENST00000423806 265 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 SNORD79.1-201ENST00000516069 84 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 SNORD92-201ENST00000585078 85 ntBASIC1.95□□□□□ -2.1
NOD1Q9Y239 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.95□□□□□ -2.1
NOD1Q9Y239 MIR519A1-201ENST00000385257 85 ntBASIC1.94□□□□□ -2.1
NOD1Q9Y239 RNA5SP292-201ENST00000390974 118 ntBASIC1.94□□□□□ -2.1
NOD1Q9Y239 RNA5SP338-201ENST00000410495 85 ntBASIC1.94□□□□□ -2.1
NOD1Q9Y239 Y_RNA.809-201ENST00000516058 95 ntBASIC1.94□□□□□ -2.1
NOD1Q9Y239 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.94□□□□□ -2.1
NOD1Q9Y239 RNU6-132P-201ENST00000383863 107 ntBASIC1.93□□□□□ -2.1
NOD1Q9Y239 MIR548U-201ENST00000390728 81 ntBASIC1.93□□□□□ -2.1
NOD1Q9Y239 RNU6-129P-201ENST00000391022 107 ntBASIC1.93□□□□□ -2.1
NOD1Q9Y239 AC019288.1-201ENST00000557918 224 ntBASIC1.93□□□□□ -2.1
NOD1Q9Y239 MIR938-201ENST00000401216 83 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 MIR1287-201ENST00000408492 90 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 RNU6-321P-201ENST00000410912 106 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 SNORA18.5-201ENST00000516616 101 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 RNU6-448P-201ENST00000517052 107 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 MIR4285-201ENST00000581001 85 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 MIR3064-201ENST00000581130 66 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 MIR4303-201ENST00000581299 66 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 AC104996.3-201ENST00000590718 94 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 AL645939.4-201ENST00000604495 135 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 AC027335.2-201ENST00000624030 375 ntBASIC1.92□□□□□ -2.1
NOD1Q9Y239 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NOD1Q9Y239 RNU6-1260P-201ENST00000362944 107 ntBASIC1.91□□□□□ -2.1
NOD1Q9Y239 AP1B1P2-201ENST00000416196 106 ntBASIC1.91□□□□□ -2.1
NOD1Q9Y239 AL450471.1-201ENST00000447509 127 ntBASIC1.91□□□□□ -2.1
NOD1Q9Y239 TRMT112P2-201ENST00000512910 132 ntBASIC1.91□□□□□ -2.1
NOD1Q9Y239 SNORA70.22-201ENST00000517160 124 ntBASIC1.91□□□□□ -2.1
NOD1Q9Y239 AL359821.1-201ENST00000605519 182 ntBASIC1.91□□□□□ -2.1
NOD1Q9Y239 MIRLET7F1-201ENST00000362202 87 ntBASIC1.9□□□□□ -2.11
NOD1Q9Y239 RNU6-624P-201ENST00000363411 107 ntBASIC1.9□□□□□ -2.11
NOD1Q9Y239 RNA5SP364-201ENST00000516938 78 ntBASIC1.9□□□□□ -2.11
NOD1Q9Y239 MIR4662A-201ENST00000637499 67 ntBASIC1.9□□□□□ -2.11
NOD1Q9Y239 RNU6-315P-201ENST00000362666 107 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 Y_RNA.491-201ENST00000384417 107 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 RNU6-535P-201ENST00000384722 107 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
NOD1Q9Y239 RNU7-102P-201ENST00000458948 62 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 RNU6-977P-201ENST00000516411 103 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 AC138907.6-201ENST00000568401 126 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 AC138869.1-201ENST00000568623 124 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 SNORD53B-201ENST00000577887 78 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 MIR4804-201ENST00000581683 73 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 AP000553.5-201ENST00000641933 54 ntBASIC1.89□□□□□ -2.11
NOD1Q9Y239 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
NOD1Q9Y239 RNU6-369P-201ENST00000362515 102 ntBASIC1.88□□□□□ -2.11
NOD1Q9Y239 RNU6-478P-201ENST00000363904 110 ntBASIC1.88□□□□□ -2.11
NOD1Q9Y239 MIR100-201ENST00000385259 80 ntBASIC1.88□□□□□ -2.11
NOD1Q9Y239 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.88□□□□□ -2.11
NOD1Q9Y239 AC097635.1-201ENST00000450678 155 ntBASIC1.88□□□□□ -2.11
NOD1Q9Y239 MIR4419B-201ENST00000577260 68 ntBASIC1.88□□□□□ -2.11
NOD1Q9Y239 TRDV1-202ENST00000621643 102 ntBASIC1.88□□□□□ -2.11
NOD1Q9Y239 RNU6-1296P-201ENST00000383879 107 ntBASIC1.87□□□□□ -2.11
NOD1Q9Y239 MIR518E-201ENST00000385252 88 ntBASIC1.87□□□□□ -2.11
NOD1Q9Y239 AL606490.4-201ENST00000423117 127 ntBASIC1.87□□□□□ -2.11
NOD1Q9Y239 MIR4255-201ENST00000579351 72 ntBASIC1.87□□□□□ -2.11
NOD1Q9Y239 MIR1-1-201ENST00000362147 71 ntBASIC1.86□□□□□ -2.11
NOD1Q9Y239 RNU6-291P-201ENST00000384720 107 ntBASIC1.86□□□□□ -2.11
NOD1Q9Y239 MIR599-201ENST00000385069 95 ntBASIC1.86□□□□□ -2.11
NOD1Q9Y239 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
NOD1Q9Y239 SNORA63.2-201ENST00000362603 126 ntBASIC1.85□□□□□ -2.11
NOD1Q9Y239 RNU6-776P-201ENST00000364403 104 ntBASIC1.85□□□□□ -2.11
NOD1Q9Y239 RNU6-1022P-201ENST00000365049 104 ntBASIC1.85□□□□□ -2.11
NOD1Q9Y239 MIR222-201ENST00000384992 110 ntBASIC1.85□□□□□ -2.11
NOD1Q9Y239 SNORD12-201ENST00000391002 90 ntBASIC1.85□□□□□ -2.11
NOD1Q9Y239 RNU1-119P-201ENST00000391122 165 ntBASIC1.85□□□□□ -2.11
NOD1Q9Y239 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.85□□□□□ -2.11
NOD1Q9Y239 AC008608.1-201ENST00000603910 127 ntBASIC1.85□□□□□ -2.11
NOD1Q9Y239 RNA5SP245-201ENST00000364239 121 ntBASIC1.84□□□□□ -2.11
NOD1Q9Y239 RNU7-56P-201ENST00000458744 62 ntBASIC1.84□□□□□ -2.11
NOD1Q9Y239 RNU7-95P-201ENST00000459222 64 ntBASIC1.84□□□□□ -2.11
NOD1Q9Y239 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.84□□□□□ -2.11
NOD1Q9Y239 AC067940.1-201ENST00000458411 300 ntBASIC1.83□□□□□ -2.12
NOD1Q9Y239 RNU6-557P-201ENST00000516842 110 ntBASIC1.83□□□□□ -2.12
NOD1Q9Y239 MIR4448-201ENST00000584360 86 ntBASIC1.83□□□□□ -2.12
NOD1Q9Y239 BX248123.2-201ENST00000606318 124 ntBASIC1.83□□□□□ -2.12
NOD1Q9Y239 AL157834.3-201ENST00000615543 103 ntBASIC1.83□□□□□ -2.12
NOD1Q9Y239 RNU6-161P-201ENST00000363051 106 ntBASIC1.82□□□□□ -2.12
NOD1Q9Y239 SNORA25.9-201ENST00000365087 128 ntBASIC1.82□□□□□ -2.12
NOD1Q9Y239 MIR520F-201ENST00000384824 87 ntBASIC1.82□□□□□ -2.12
NOD1Q9Y239 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.82□□□□□ -2.12
NOD1Q9Y239 FGF7P7-201ENST00000514120 227 ntBASIC1.82□□□□□ -2.12
NOD1Q9Y239 RNU6-1108P-201ENST00000516308 104 ntBASIC1.82□□□□□ -2.12
NOD1Q9Y239 MIR8070-201ENST00000616510 88 ntBASIC1.82□□□□□ -2.12
NOD1Q9Y239 U6.100-201ENST00000636230 99 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms