Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 RNU4-67P-201ENST00000364569 141 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 Y_RNA.273-201ENST00000364703 102 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 RNU6-1056P-201ENST00000383996 107 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 RNU6-816P-201ENST00000390914 107 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 RNU6-1268P-201ENST00000391214 107 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 RNU6-1239P-201ENST00000391310 107 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 SNORA7.5-201ENST00000410672 110 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 MIR3678-201ENST00000578455 94 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 MIR376B-201ENST00000614515 100 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 AL162726.3-218ENST00000636401 95 ntBASIC0.81□□□□□ -2.28
USP35Q9P2H5 RNU6-834P-201ENST00000362367 110 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 RNA5SP133-201ENST00000363368 119 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 Y_RNA.281-201ENST00000364774 94 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 RNU6-1325P-201ENST00000364905 105 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 SNORD20-201ENST00000384550 80 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 Y_RNA.536-201ENST00000384621 113 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 MIR34C-201ENST00000384831 77 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 RNU6-733P-201ENST00000410759 104 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 Y_RNA.629-201ENST00000411368 105 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 RNU6-469P-201ENST00000516253 101 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 RNU6-589P-201ENST00000516485 107 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 AC068339.1-201ENST00000526965 141 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 MIR548AI-201ENST00000579940 88 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 AC092634.7-201ENST00000621022 103 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 MIR5087-201ENST00000635826 76 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 U6.109-201ENST00000636749 87 ntBASIC0.8□□□□□ -2.28
USP35Q9P2H5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.79□□□□□ -2.28
USP35Q9P2H5 Y_RNA.247-201ENST00000364500 92 ntBASIC0.79□□□□□ -2.28
USP35Q9P2H5 U8.6-201ENST00000364939 135 ntBASIC0.79□□□□□ -2.28
USP35Q9P2H5 Y_RNA.328-201ENST00000365208 113 ntBASIC0.79□□□□□ -2.28
USP35Q9P2H5 RNU7-48P-201ENST00000458875 63 ntBASIC0.79□□□□□ -2.28
USP35Q9P2H5 RPL39P34-201ENST00000477141 156 ntBASIC0.79□□□□□ -2.28
USP35Q9P2H5 RNU6-531P-201ENST00000516694 104 ntBASIC0.79□□□□□ -2.28
USP35Q9P2H5 Y_RNA.697-201ENST00000516776 113 ntBASIC0.79□□□□□ -2.28
USP35Q9P2H5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.79□□□□□ -2.28
USP35Q9P2H5 Y_RNA.119-201ENST00000363301 96 ntBASIC0.78□□□□□ -2.28
USP35Q9P2H5 RNY1P2-201ENST00000364820 117 ntBASIC0.78□□□□□ -2.28
USP35Q9P2H5 RNU6-880P-201ENST00000384526 107 ntBASIC0.78□□□□□ -2.28
USP35Q9P2H5 RNY4P18-201ENST00000391107 89 ntBASIC0.78□□□□□ -2.28
USP35Q9P2H5 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC0.78□□□□□ -2.28
USP35Q9P2H5 RNA5SP94-201ENST00000516917 108 ntBASIC0.78□□□□□ -2.28
USP35Q9P2H5 DEFB131E-201ENST00000532329 154 ntBASIC0.78□□□□□ -2.28
USP35Q9P2H5 MIR3613-201ENST00000579844 87 ntBASIC0.78□□□□□ -2.28
USP35Q9P2H5 uc_338.17-201ENST00000619633 179 ntBASIC0.78□□□□□ -2.28
USP35Q9P2H5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.78□□□□□ -2.29
USP35Q9P2H5 Y_RNA.155-201ENST00000363632 101 ntBASIC0.77□□□□□ -2.29
USP35Q9P2H5 RNU6-215P-201ENST00000365169 102 ntBASIC0.77□□□□□ -2.29
USP35Q9P2H5 RNU6-409P-201ENST00000384114 104 ntBASIC0.77□□□□□ -2.29
USP35Q9P2H5 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC0.77□□□□□ -2.29
USP35Q9P2H5 Y_RNA.709-201ENST00000516952 92 ntBASIC0.77□□□□□ -2.29
USP35Q9P2H5 RNU6-1006P-201ENST00000516998 103 ntBASIC0.77□□□□□ -2.29
USP35Q9P2H5 MIR5009-201ENST00000578736 100 ntBASIC0.77□□□□□ -2.29
USP35Q9P2H5 NEAT1_2.1-201ENST00000620525 105 ntBASIC0.77□□□□□ -2.29
USP35Q9P2H5 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.77□□□□□ -2.29
USP35Q9P2H5 Y_RNA.98-201ENST00000363109 102 ntBASIC0.76□□□□□ -2.29
USP35Q9P2H5 RNU6-1107P-201ENST00000364817 104 ntBASIC0.76□□□□□ -2.29
USP35Q9P2H5 Y_RNA.360-201ENST00000365512 102 ntBASIC0.76□□□□□ -2.29
USP35Q9P2H5 RNU6-1014P-201ENST00000383940 103 ntBASIC0.76□□□□□ -2.29
USP35Q9P2H5 RNU6-291P-201ENST00000384720 107 ntBASIC0.76□□□□□ -2.29
USP35Q9P2H5 MIR577-201ENST00000385196 96 ntBASIC0.76□□□□□ -2.29
USP35Q9P2H5 Y_RNA.309-201ENST00000365046 111 ntBASIC0.75□□□□□ -2.29
USP35Q9P2H5 Y_RNA.323-201ENST00000365157 109 ntBASIC0.75□□□□□ -2.29
USP35Q9P2H5 RNU6-535P-201ENST00000384722 107 ntBASIC0.75□□□□□ -2.29
USP35Q9P2H5 MIR92A1-201ENST00000385233 78 ntBASIC0.75□□□□□ -2.29
USP35Q9P2H5 RNA5SP285-201ENST00000516619 119 ntBASIC0.75□□□□□ -2.29
USP35Q9P2H5 MIR4500-201ENST00000579472 76 ntBASIC0.75□□□□□ -2.29
USP35Q9P2H5 AL512310.12-203ENST00000640543 90 ntBASIC0.75□□□□□ -2.29
USP35Q9P2H5 Y_RNA.32-201ENST00000362589 110 ntBASIC0.74□□□□□ -2.29
USP35Q9P2H5 RNU6-1313P-201ENST00000362622 102 ntBASIC0.74□□□□□ -2.29
USP35Q9P2H5 RNU6-865P-201ENST00000364772 107 ntBASIC0.74□□□□□ -2.29
USP35Q9P2H5 Y_RNA.507-201ENST00000384500 99 ntBASIC0.74□□□□□ -2.29
USP35Q9P2H5 MIR1912-201ENST00000410389 80 ntBASIC0.74□□□□□ -2.29
USP35Q9P2H5 SNORA19.1-201ENST00000410656 129 ntBASIC0.74□□□□□ -2.29
USP35Q9P2H5 SNORA62.5-201ENST00000516634 120 ntBASIC0.74□□□□□ -2.29
USP35Q9P2H5 SNORA31.14-201ENST00000516728 116 ntBASIC0.74□□□□□ -2.29
USP35Q9P2H5 RNU6-1099P-201ENST00000363533 107 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 RNU6-44P-201ENST00000384045 107 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 RNU6-1201P-201ENST00000384227 107 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 RNU6-106P-201ENST00000384405 107 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 RNU6-554P-201ENST00000410466 106 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 BX276092.1-201ENST00000427368 251 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 RNU6-1018P-201ENST00000516577 106 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 AP001362.1-201ENST00000625165 124 ntBASIC0.73□□□□□ -2.29
USP35Q9P2H5 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.73□□□□□ -2.29
USP35Q9P2H5 RNA5SP245-201ENST00000364239 121 ntBASIC0.72□□□□□ -2.29
USP35Q9P2H5 SNORA40.8-201ENST00000411034 126 ntBASIC0.72□□□□□ -2.29
USP35Q9P2H5 RNU6-412P-201ENST00000516434 106 ntBASIC0.72□□□□□ -2.29
USP35Q9P2H5 MIR4514-201ENST00000581410 57 ntBASIC0.72□□□□□ -2.29
USP35Q9P2H5 uc_338.28-201ENST00000612082 187 ntBASIC0.72□□□□□ -2.29
USP35Q9P2H5 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.72□□□□□ -2.29
USP35Q9P2H5 MIR101-2-201ENST00000362195 79 ntBASIC0.71□□□□□ -2.3
USP35Q9P2H5 Y_RNA.49-201ENST00000362714 112 ntBASIC0.71□□□□□ -2.3
USP35Q9P2H5 SNORA63.4-201ENST00000362763 126 ntBASIC0.71□□□□□ -2.3
USP35Q9P2H5 RNU6-832P-201ENST00000363319 107 ntBASIC0.71□□□□□ -2.3
USP35Q9P2H5 SNORD18A-201ENST00000363753 72 ntBASIC0.71□□□□□ -2.3
USP35Q9P2H5 RNA5SP517-201ENST00000364724 117 ntBASIC0.71□□□□□ -2.3
USP35Q9P2H5 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.71□□□□□ -2.3
USP35Q9P2H5 SNORD71-201ENST00000411292 86 ntBASIC0.71□□□□□ -2.3
USP35Q9P2H5 AL035461.1-201ENST00000421490 332 ntBASIC0.71□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 171 ms