Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 AC098479.1-201ENST00000609225 154 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNU6-797P-201ENST00000363101 109 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNU6-47P-201ENST00000383866 107 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNU6-1254P-201ENST00000391266 104 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNU4-63P-201ENST00000411313 118 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNA5SP484-201ENST00000458857 111 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNU4-71P-201ENST00000516258 113 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 RNU7-13P-201ENST00000516413 62 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 MIR6507-201ENST00000613630 70 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 U2.14-201ENST00000615943 113 ntBASIC-0.28□□□□□ -2.45
CCDC88CQ9P219 Y_RNA.145-201ENST00000363527 102 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 MIR224-201ENST00000384889 81 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 MIR568-201ENST00000385036 95 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 MIR196A2-201ENST00000385189 110 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.604-201ENST00000410574 102 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 SNORD126-201ENST00000459475 77 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 RNU6-850P-201ENST00000516934 103 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 AC022559.1-201ENST00000520905 205 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 AP002392.1-201ENST00000537692 208 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 YWHAEP2-201ENST00000580066 112 ntBASIC-0.29□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 RNU6-243P-201ENST00000391140 107 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 MIR876-201ENST00000401147 81 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 RNU7-164P-201ENST00000459221 62 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 RNU6-287P-201ENST00000516230 98 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 MIR3128-201ENST00000581957 66 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 MIR1255B1-201ENST00000636325 63 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 RNU6-1307P-201ENST00000391012 103 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 AC109327.2-201ENST00000448339 378 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 SNORD2-201ENST00000459163 69 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 RNU6-320P-201ENST00000516511 106 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 MIR4788-201ENST00000639104 80 ntBASIC-0.3□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.11-201ENST00000362375 109 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 RNU6-235P-201ENST00000362644 107 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 RNU6-978P-201ENST00000364371 103 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 SNORD114-29-201ENST00000364819 70 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 RNU6-524P-201ENST00000384270 107 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 AL590491.3-201ENST00000610731 82 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 RNA5SP275-201ENST00000363936 118 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 RNA5SP205-201ENST00000364653 136 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 SNORD56B-201ENST00000384713 71 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 AC096531.1-201ENST00000419107 107 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 MTND4LP11-201ENST00000422184 280 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 AC114755.3-201ENST00000481111 251 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 RNU6-90P-201ENST00000606352 106 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 AC141273.2-201ENST00000618989 130 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 AL512310.12-203ENST00000640543 90 ntBASIC-0.31□□□□□ -2.46
CCDC88CQ9P219 U8.6-201ENST00000364939 135 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 MTND2P23-201ENST00000422990 651 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 RNU7-74P-201ENST00000459104 62 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 AL117351.2-201ENST00000513571 157 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.700-201ENST00000516806 100 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 MIR8064-201ENST00000612863 90 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 AL442128.1-201ENST00000615151 90 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 MIR3658-201ENST00000636291 56 ntBASIC-0.32□□□□□ -2.46
CCDC88CQ9P219 RNU6-363P-201ENST00000362895 105 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 SNORD115-19-201ENST00000363098 82 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 SNORD115-18-201ENST00000363293 82 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 SNORD115-17-201ENST00000364612 82 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.344-201ENST00000365381 112 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 RNU6-521P-201ENST00000516663 105 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 AP000676.1-201ENST00000533307 52 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 AC062037.2-201ENST00000610137 73 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 U7.6-201ENST00000610841 64 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.29-201ENST00000362570 113 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 RNU6-170P-201ENST00000362832 104 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 Y_RNA.83-201ENST00000363005 113 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 SNORD49B-201ENST00000365172 72 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 RNU6-455P-201ENST00000384681 107 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 MIR519A1-201ENST00000385257 85 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.33□□□□□ -2.46
CCDC88CQ9P219 RNU6-312P-201ENST00000364629 107 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 SNORD115-44-201ENST00000365391 82 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 MIR539-201ENST00000365690 78 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 MIR577-201ENST00000385196 96 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 MIR548F4-201ENST00000408515 105 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 RNU6-327P-201ENST00000516270 127 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 MIR4432-201ENST00000581823 84 ntBASIC-0.34□□□□□ -2.46
CCDC88CQ9P219 MIR548AE1-201ENST00000583292 70 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 189.6 ms