Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 RNU4-84P-201ENST00000364200 139 ntBASIC-0.41□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.233-201ENST00000364407 101 ntBASIC-0.41□□□□□ -2.48
HOXC10Q9NYD6 SNORD14C-201ENST00000365382 88 ntBASIC-0.41□□□□□ -2.48
HOXC10Q9NYD6 RNU6-47P-201ENST00000383866 107 ntBASIC-0.41□□□□□ -2.48
HOXC10Q9NYD6 RNU6-1219P-201ENST00000516143 112 ntBASIC-0.41□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.680-201ENST00000516441 93 ntBASIC-0.41□□□□□ -2.48
HOXC10Q9NYD6 AC009779.6-201ENST00000603972 165 ntBASIC-0.41□□□□□ -2.48
HOXC10Q9NYD6 AL162726.3-218ENST00000636401 95 ntBASIC-0.41□□□□□ -2.48
HOXC10Q9NYD6 RNU6-508P-201ENST00000363231 103 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 RNU6-309P-201ENST00000364573 106 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 U8.6-201ENST00000364939 135 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 RNU6-616P-201ENST00000384353 107 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.584-201ENST00000391090 114 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 SNORD126-201ENST00000459475 77 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 RNU7-188P-201ENST00000517063 64 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 AC069503.3-201ENST00000618674 145 ntBASIC-0.42□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.60-201ENST00000362831 98 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 RNA5SP98-201ENST00000363158 137 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 SNORA20.1-201ENST00000364790 130 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 SNORD115-44-201ENST00000365391 82 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 MIR617-201ENST00000385030 97 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.690-201ENST00000516603 95 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 MIR4473-201ENST00000583731 91 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 AP001180.6-201ENST00000584918 159 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 DNAJC19P2-201ENST00000593340 302 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 AL137067.1-201ENST00000615933 120 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 MIR4788-201ENST00000639104 80 ntBASIC-0.43□□□□□ -2.48
HOXC10Q9NYD6 SNORD115-19-201ENST00000363098 82 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 SNORD115-18-201ENST00000363293 82 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 RNY1P11-201ENST00000363759 113 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 RNA5SP275-201ENST00000363936 118 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 SNORD115-17-201ENST00000364612 82 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 MIR181B2-201ENST00000385004 89 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 AC096531.1-201ENST00000419107 107 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 HAR1A.1-201ENST00000459583 118 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 RNY4P20-201ENST00000516678 93 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 RNU6-175P-201ENST00000516896 107 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 RNU6-850P-201ENST00000516934 103 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 MIR548AE1-201ENST00000583292 70 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 MIR4493-201ENST00000584016 73 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 MIR4263-201ENST00000584745 83 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 AC072026.1-201ENST00000605023 201 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 AC087741.2-201ENST00000619415 172 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 U4.1-201ENST00000620349 87 ntBASIC-0.44□□□□□ -2.48
HOXC10Q9NYD6 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.45□□□□□ -2.48
HOXC10Q9NYD6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-0.45□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.45□□□□□ -2.48
HOXC10Q9NYD6 MIR34C-201ENST00000384831 77 ntBASIC-0.45□□□□□ -2.48
HOXC10Q9NYD6 SNORD114-11-201ENST00000363738 75 ntBASIC-0.46□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.193-201ENST00000363979 102 ntBASIC-0.46□□□□□ -2.48
HOXC10Q9NYD6 MIR539-201ENST00000365690 78 ntBASIC-0.46□□□□□ -2.48
HOXC10Q9NYD6 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.46□□□□□ -2.48
HOXC10Q9NYD6 MIR196A2-201ENST00000385189 110 ntBASIC-0.46□□□□□ -2.48
HOXC10Q9NYD6 YWHAEP2-201ENST00000580066 112 ntBASIC-0.46□□□□□ -2.48
HOXC10Q9NYD6 uc_338.10-201ENST00000621872 182 ntBASIC-0.46□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.441-201ENST00000384123 112 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 MIR516A2-201ENST00000384888 90 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 MIR516A1-201ENST00000385033 90 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 RNU6-1135P-201ENST00000411083 103 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 Z95118.1-201ENST00000421372 247 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 MIR2113-201ENST00000459007 91 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 AC130289.1-201ENST00000577321 73 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 AC108081.1-201ENST00000604358 221 ntBASIC-0.47□□□□□ -2.48
HOXC10Q9NYD6 Y_RNA.240-201ENST00000364469 95 ntBASIC-0.48□□□□□ -2.49
HOXC10Q9NYD6 RNU6-1011P-201ENST00000384668 107 ntBASIC-0.48□□□□□ -2.49
HOXC10Q9NYD6 MIR3658-201ENST00000636291 56 ntBASIC-0.48□□□□□ -2.49
HOXC10Q9NYD6 SNORD114-29-201ENST00000364819 70 ntBASIC-0.49□□□□□ -2.49
HOXC10Q9NYD6 SNORA51.5-201ENST00000384126 131 ntBASIC-0.49□□□□□ -2.49
HOXC10Q9NYD6 MT-TI-201ENST00000387365 69 ntBASIC-0.49□□□□□ -2.49
HOXC10Q9NYD6 RNU6-284P-201ENST00000411105 106 ntBASIC-0.49□□□□□ -2.49
HOXC10Q9NYD6 RNU6-287P-201ENST00000516230 98 ntBASIC-0.49□□□□□ -2.49
HOXC10Q9NYD6 MIR4460-201ENST00000577862 86 ntBASIC-0.49□□□□□ -2.49
HOXC10Q9NYD6 MIR3121-201ENST00000579680 77 ntBASIC-0.49□□□□□ -2.49
HOXC10Q9NYD6 MIR4432-201ENST00000581823 84 ntBASIC-0.49□□□□□ -2.49
HOXC10Q9NYD6 SNORD38.2-201ENST00000384470 69 ntBASIC-0.5□□□□□ -2.49
HOXC10Q9NYD6 MT-TY-201ENST00000387409 66 ntBASIC-0.5□□□□□ -2.49
HOXC10Q9NYD6 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.5□□□□□ -2.49
HOXC10Q9NYD6 RNU6-327P-201ENST00000516270 127 ntBASIC-0.5□□□□□ -2.49
HOXC10Q9NYD6 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.5□□□□□ -2.49
HOXC10Q9NYD6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-0.5□□□□□ -2.49
HOXC10Q9NYD6 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.5□□□□□ -2.49
HOXC10Q9NYD6 FTX_2.1-201ENST00000618816 94 ntBASIC-0.5□□□□□ -2.49
HOXC10Q9NYD6 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.51□□□□□ -2.49
HOXC10Q9NYD6 Y_RNA.307-201ENST00000365022 117 ntBASIC-0.51□□□□□ -2.49
HOXC10Q9NYD6 RNU6-154P-201ENST00000384306 106 ntBASIC-0.51□□□□□ -2.49
HOXC10Q9NYD6 MIR9-2-201ENST00000384838 87 ntBASIC-0.51□□□□□ -2.49
HOXC10Q9NYD6 SNORD37.2-201ENST00000391075 66 ntBASIC-0.51□□□□□ -2.49
HOXC10Q9NYD6 RNU7-197P-201ENST00000458836 62 ntBASIC-0.51□□□□□ -2.49
HOXC10Q9NYD6 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.51□□□□□ -2.49
HOXC10Q9NYD6 AC007012.1-201ENST00000567192 175 ntBASIC-0.51□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 229.3 ms