Protein–RNA interactions for Protein: Q9NXE4

SMPD4, Sphingomyelin phosphodiesterase 4, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4Q9NXE4 RNU7-195P-201ENST00000458793 62 ntBASIC1.63□□□□□ -2.15
SMPD4Q9NXE4 RNU6-1194P-201ENST00000516208 104 ntBASIC1.63□□□□□ -2.15
SMPD4Q9NXE4 BX248123.2-201ENST00000606318 124 ntBASIC1.63□□□□□ -2.15
SMPD4Q9NXE4 snoU13.31-201ENST00000607291 104 ntBASIC1.63□□□□□ -2.15
SMPD4Q9NXE4 RNU5F-1-201ENST00000362507 117 ntBASIC1.62□□□□□ -2.15
SMPD4Q9NXE4 Y_RNA.164-201ENST00000363709 102 ntBASIC1.62□□□□□ -2.15
SMPD4Q9NXE4 SNORD100-201ENST00000408573 76 ntBASIC1.62□□□□□ -2.15
SMPD4Q9NXE4 MIR2113-201ENST00000459007 91 ntBASIC1.62□□□□□ -2.15
SMPD4Q9NXE4 MIR2115-201ENST00000516657 100 ntBASIC1.62□□□□□ -2.15
SMPD4Q9NXE4 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.62□□□□□ -2.15
SMPD4Q9NXE4 RNU4-58P-201ENST00000363192 141 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 RNA5SP363-201ENST00000365072 115 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 RNU6-649P-201ENST00000384463 107 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 RNU6-1241P-201ENST00000384536 107 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 RNU7-95P-201ENST00000459222 64 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 snoU13.21-201ENST00000459368 105 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 RNU6-1053P-201ENST00000515930 101 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 RNU11-2P-201ENST00000516898 142 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 AC015688.6-201ENST00000577737 104 ntBASIC1.61□□□□□ -2.15
SMPD4Q9NXE4 RNU1-36P-201ENST00000365130 165 ntBASIC1.6□□□□□ -2.15
SMPD4Q9NXE4 SNORD93-201ENST00000408813 74 ntBASIC1.6□□□□□ -2.15
SMPD4Q9NXE4 AC008834.1-201ENST00000511612 175 ntBASIC1.6□□□□□ -2.15
SMPD4Q9NXE4 RNU6-947P-201ENST00000516264 106 ntBASIC1.6□□□□□ -2.15
SMPD4Q9NXE4 SNORA77B-201ENST00000578179 125 ntBASIC1.6□□□□□ -2.15
SMPD4Q9NXE4 AC013244.2-201ENST00000603396 103 ntBASIC1.6□□□□□ -2.15
SMPD4Q9NXE4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.6□□□□□ -2.15
SMPD4Q9NXE4 ZNF209P-201ENST00000593450 2304 ntBASIC1.6□□□□□ -2.15
SMPD4Q9NXE4 MIR377-201ENST00000362145 69 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 Y_RNA.205-201ENST00000364128 113 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 Y_RNA.207-201ENST00000364142 106 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 RNU6-580P-201ENST00000365159 107 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 RNU6-1051P-201ENST00000365471 102 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 RNU6-154P-201ENST00000384306 106 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 Y_RNA.536-201ENST00000384621 113 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 YWHAEP2-201ENST00000580066 112 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 YWHAEP3-201ENST00000582767 121 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 MIR3140-201ENST00000583685 90 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 TRDV1-202ENST00000621643 102 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 U6.111-201ENST00000636093 83 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 U6.100-201ENST00000636230 99 ntBASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.59□□□□□ -2.15
SMPD4Q9NXE4 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 Y_RNA.36-201ENST00000362602 112 ntBASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 RNU6-403P-201ENST00000363163 104 ntBASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 RNU6-800P-201ENST00000384473 103 ntBASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 MIR517C-201ENST00000385103 95 ntBASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 SNORD30.1-201ENST00000391309 70 ntBASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 MIR3198-2-201ENST00000577868 80 ntBASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
SMPD4Q9NXE4 Y_RNA.42-201ENST00000362660 108 ntBASIC1.57□□□□□ -2.16
SMPD4Q9NXE4 RNU6-291P-201ENST00000384720 107 ntBASIC1.57□□□□□ -2.16
SMPD4Q9NXE4 MIR942-201ENST00000401111 86 ntBASIC1.57□□□□□ -2.16
SMPD4Q9NXE4 RNU1-92P-201ENST00000517017 135 ntBASIC1.57□□□□□ -2.16
SMPD4Q9NXE4 SNORA44.1-201ENST00000517031 108 ntBASIC1.57□□□□□ -2.16
SMPD4Q9NXE4 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.57□□□□□ -2.16
SMPD4Q9NXE4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.57□□□□□ -2.16
SMPD4Q9NXE4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
SMPD4Q9NXE4 MIR103A2-201ENST00000362154 78 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 RNA5SP264-201ENST00000363115 107 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 RNU6-340P-201ENST00000364005 107 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 RNU6-53P-201ENST00000365367 106 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 Y_RNA.371-201ENST00000365591 113 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 MIR154-201ENST00000385243 84 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 MIR519A1-201ENST00000385257 85 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 MIR934-201ENST00000401241 83 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 RNU2-59P-201ENST00000410482 191 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 AL354695.1-201ENST00000427935 228 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 AC092628.1-201ENST00000436250 252 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 MIR18B-201ENST00000454574 71 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 AL133373.1-201ENST00000497098 94 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 Y_RNA.676-201ENST00000516393 96 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 RNU7-156P-201ENST00000517214 74 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 MIR4696-201ENST00000581431 70 ntBASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
SMPD4Q9NXE4 Y_RNA.13-201ENST00000362403 112 ntBASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 RNU6-1260P-201ENST00000362944 107 ntBASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 SNORA8.1-201ENST00000384250 140 ntBASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 RNU6-663P-201ENST00000391105 106 ntBASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 RNU6-1054P-201ENST00000411293 104 ntBASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 RNU7-185P-201ENST00000459215 60 ntBASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 Y_RNA.809-201ENST00000516058 95 ntBASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 MIR4285-201ENST00000581001 85 ntBASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.55□□□□□ -2.16
SMPD4Q9NXE4 MIR101-2-201ENST00000362195 79 ntBASIC1.54□□□□□ -2.16
SMPD4Q9NXE4 MIR337-201ENST00000362281 93 ntBASIC1.54□□□□□ -2.16
SMPD4Q9NXE4 RNU6-664P-201ENST00000362381 107 ntBASIC1.54□□□□□ -2.16
SMPD4Q9NXE4 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
SMPD4Q9NXE4 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
SMPD4Q9NXE4 SNORA24B-201ENST00000384176 131 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 MIR30A-201ENST00000385092 71 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 SNORD83.1-201ENST00000411362 77 ntBASIC1.53□□□□□ -2.16
SMPD4Q9NXE4 Y_RNA.697-201ENST00000516776 113 ntBASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 218.2 ms