Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC092628.1-201ENST00000436250 252 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 MIR5089-201ENST00000580047 84 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 MIR3937-201ENST00000580135 106 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 MIR3140-201ENST00000583685 90 ntBASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CUEDC1Q9NWM3 ZNF209P-201ENST00000593450 2304 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-1216P-201ENST00000362590 107 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 SNORD45.1-201ENST00000363181 77 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 SNORD115-22-201ENST00000364456 82 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-1065P-201ENST00000384513 106 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-765P-201ENST00000516916 99 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 AC015688.6-201ENST00000577737 104 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 AC013244.2-201ENST00000603396 103 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 U6.100-201ENST00000636230 99 ntBASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
CUEDC1Q9NWM3 MIR934-201ENST00000401241 83 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 MIR1185-1-201ENST00000408598 86 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 snoU13.25-201ENST00000458945 104 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 RNU6-752P-201ENST00000516376 102 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 AC019176.1-201ENST00000518519 225 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 MIR6082-201ENST00000613604 109 ntBASIC2.22□□□□□ -2.05
CUEDC1Q9NWM3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
CUEDC1Q9NWM3 MIR5007-201ENST00000583098 95 ntBASIC2.21□□□□□ -2.06
CUEDC1Q9NWM3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
CUEDC1Q9NWM3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CUEDC1Q9NWM3 MIR103A2-201ENST00000362154 78 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 RNA5SP264-201ENST00000363115 107 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-824P-201ENST00000363724 104 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 Y_RNA.226-201ENST00000364337 114 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 SNORD1A-201ENST00000364968 72 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 MIR2113-201ENST00000459007 91 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 MIR4422-201ENST00000581938 83 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 MIR7111-201ENST00000619751 72 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 MIR6766-201ENST00000622641 72 ntBASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CUEDC1Q9NWM3 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 SNORD113.1-201ENST00000363280 73 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 Y_RNA.164-201ENST00000363709 102 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 SNORD116-24-201ENST00000384549 92 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 U3.27-201ENST00000391237 200 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 MIR1257-201ENST00000408490 117 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 AC110620.1-201ENST00000416042 228 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 RNU7-185P-201ENST00000459215 60 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 Y_RNA.697-201ENST00000516776 113 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 AC138907.6-201ENST00000568401 126 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 AC138869.1-201ENST00000568623 124 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 5S_rRNA.15-201ENST00000611169 127 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 MIR6873-201ENST00000622788 63 ntBASIC2.19□□□□□ -2.06
CUEDC1Q9NWM3 MIR451A-201ENST00000385059 72 ntBASIC2.18□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-1054P-201ENST00000411293 104 ntBASIC2.18□□□□□ -2.06
CUEDC1Q9NWM3 HMGN2P38-201ENST00000423806 265 ntBASIC2.18□□□□□ -2.06
CUEDC1Q9NWM3 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
CUEDC1Q9NWM3 MIR337-201ENST00000362281 93 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 Y_RNA.13-201ENST00000362403 112 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-654P-201ENST00000364373 107 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-1265P-201ENST00000516342 103 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 AC069503.3-201ENST00000618674 145 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 AC023934.1-201ENST00000574529 2389 ntBASIC2.17□□□□□ -2.06
CUEDC1Q9NWM3 MIR599-201ENST00000385069 95 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 MIR221-201ENST00000385135 110 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 RNU1-78P-201ENST00000391248 165 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 RNU6-947P-201ENST00000516264 106 ntBASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CUEDC1Q9NWM3 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-604P-201ENST00000390917 100 ntBASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-1177P-201ENST00000391058 104 ntBASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-274P-201ENST00000459566 107 ntBASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 DLEU2_3.2-201ENST00000612883 73 ntBASIC2.15□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-614P-201ENST00000384369 107 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 MIR1287-201ENST00000408492 90 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 RNA5SP95-201ENST00000410319 137 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-1053P-201ENST00000515930 101 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-1057P-201ENST00000517162 102 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 MIR4498-201ENST00000577599 66 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 U6.59-201ENST00000615686 107 ntBASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC2.14□□□□□ -2.07
CUEDC1Q9NWM3 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CUEDC1Q9NWM3 SNORA26.9-201ENST00000391322 122 ntBASIC2.13□□□□□ -2.07
CUEDC1Q9NWM3 MIR302D-201ENST00000362275 68 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-1052P-201ENST00000411398 104 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 AC079150.2-201ENST00000443733 78 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-719P-201ENST00000516671 104 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 MIR219B-201ENST00000637023 88 ntBASIC2.12□□□□□ -2.07
CUEDC1Q9NWM3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 SNORD115-44-201ENST00000365391 82 ntBASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 RNU4-52P-201ENST00000384209 138 ntBASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 SNORA40.6-201ENST00000391153 128 ntBASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 MIR4285-201ENST00000581001 85 ntBASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
CUEDC1Q9NWM3 MIR125B2-201ENST00000385128 89 ntBASIC2.1□□□□□ -2.07
CUEDC1Q9NWM3 RNU6-295P-201ENST00000516901 104 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 295.3 ms