Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC106800.4-201ENST00000614905 153 ntBASIC1.39□□□□□ -2.19
SEC61A2Q9H9S3 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.39□□□□□ -2.19
SEC61A2Q9H9S3 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 SNORD111-201ENST00000408139 94 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 MIR1304-201ENST00000408243 91 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 RPS26P5-201ENST00000418544 335 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 AC108667.1-201ENST00000428618 249 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 AC092628.1-201ENST00000436250 252 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 RNU7-21P-201ENST00000459430 62 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 SNORA18.5-201ENST00000516616 101 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-902P-201ENST00000517212 91 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 MIR548H5-201ENST00000580314 60 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 MIR4676-201ENST00000583078 72 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 AL645939.4-201ENST00000604495 135 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 BX248123.2-201ENST00000606318 124 ntBASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-129P-201ENST00000391022 107 ntBASIC1.37□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-994P-201ENST00000410507 111 ntBASIC1.37□□□□□ -2.19
SEC61A2Q9H9S3 AL606490.4-201ENST00000423117 127 ntBASIC1.37□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-237P-201ENST00000515985 71 ntBASIC1.37□□□□□ -2.19
SEC61A2Q9H9S3 Y_RNA.809-201ENST00000516058 95 ntBASIC1.37□□□□□ -2.19
SEC61A2Q9H9S3 SNORD53B-201ENST00000577887 78 ntBASIC1.37□□□□□ -2.19
SEC61A2Q9H9S3 MIR4285-201ENST00000581001 85 ntBASIC1.37□□□□□ -2.19
SEC61A2Q9H9S3 MIR3064-201ENST00000581130 66 ntBASIC1.37□□□□□ -2.19
SEC61A2Q9H9S3 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SEC61A2Q9H9S3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.36□□□□□ -2.19
SEC61A2Q9H9S3 Y_RNA.42-201ENST00000362660 108 ntBASIC1.36□□□□□ -2.19
SEC61A2Q9H9S3 Y_RNA.56-201ENST00000362798 112 ntBASIC1.36□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-478P-201ENST00000363904 110 ntBASIC1.36□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-364P-201ENST00000384387 107 ntBASIC1.36□□□□□ -2.19
SEC61A2Q9H9S3 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.36□□□□□ -2.19
SEC61A2Q9H9S3 AC104996.3-201ENST00000590718 94 ntBASIC1.36□□□□□ -2.19
SEC61A2Q9H9S3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 RNU1-42P-201ENST00000364033 160 ntBASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 SNORA80D-201ENST00000384488 135 ntBASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 RNU4-62P-201ENST00000410125 130 ntBASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-448P-201ENST00000517052 107 ntBASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 SNORD92-201ENST00000585078 85 ntBASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 RNU7-10P-201ENST00000607194 63 ntBASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 MIR4662A-201ENST00000637499 67 ntBASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-161P-201ENST00000363051 106 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 RNA5SP245-201ENST00000364239 121 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-776P-201ENST00000364403 104 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-1022P-201ENST00000365049 104 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 Y_RNA.491-201ENST00000384417 107 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 MIR517C-201ENST00000385103 95 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 SNORD79.1-201ENST00000516069 84 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 RNU6-1108P-201ENST00000516308 104 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 AC019288.1-201ENST00000557918 224 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 AL157834.3-201ENST00000615543 103 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 AC027335.2-201ENST00000624030 375 ntBASIC1.34□□□□□ -2.19
SEC61A2Q9H9S3 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-369P-201ENST00000362515 102 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-535P-201ENST00000384722 107 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 MIR100-201ENST00000385259 80 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 MIR548U-201ENST00000390728 81 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 SNORA67.6-201ENST00000391093 99 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 SNORD90-201ENST00000391145 111 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 MIR938-201ENST00000401216 83 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 RNU7-102P-201ENST00000458948 62 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-977P-201ENST00000516411 103 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-765P-201ENST00000516916 99 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 AC008608.1-201ENST00000603910 127 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 TRDV1-202ENST00000621643 102 ntBASIC1.33□□□□□ -2.2
SEC61A2Q9H9S3 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 SNORA63.2-201ENST00000362603 126 ntBASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-624P-201ENST00000363411 107 ntBASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-1296P-201ENST00000383879 107 ntBASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-291P-201ENST00000384720 107 ntBASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 AL603825.1-201ENST00000438481 80 ntBASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 RNA5SP458-201ENST00000516188 119 ntBASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 SNORA70.22-201ENST00000517160 124 ntBASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SEC61A2Q9H9S3 MIR222-201ENST00000384992 110 ntBASIC1.31□□□□□ -2.2
SEC61A2Q9H9S3 MIR599-201ENST00000385069 95 ntBASIC1.31□□□□□ -2.2
SEC61A2Q9H9S3 AL354695.1-201ENST00000427935 228 ntBASIC1.31□□□□□ -2.2
SEC61A2Q9H9S3 MIR4804-201ENST00000581683 73 ntBASIC1.31□□□□□ -2.2
SEC61A2Q9H9S3 MIR4781-201ENST00000585250 76 ntBASIC1.31□□□□□ -2.2
SEC61A2Q9H9S3 MIR7974-201ENST00000615835 79 ntBASIC1.31□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-315P-201ENST00000362666 107 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-1260P-201ENST00000362944 107 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 MIR518E-201ENST00000385252 88 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 MIR320A-201ENST00000385302 82 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 SNORA67.5-201ENST00000391036 107 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 RNU6-955P-201ENST00000410497 104 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 SNORA31.24-201ENST00000517232 57 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 U6.100-201ENST00000636230 99 ntBASIC1.3□□□□□ -2.2
SEC61A2Q9H9S3 MIR1-1-201ENST00000362147 71 ntBASIC1.29□□□□□ -2.2
SEC61A2Q9H9S3 MIR520F-201ENST00000384824 87 ntBASIC1.29□□□□□ -2.2
SEC61A2Q9H9S3 MIR519A1-201ENST00000385257 85 ntBASIC1.29□□□□□ -2.2
SEC61A2Q9H9S3 AC138907.6-201ENST00000568401 126 ntBASIC1.29□□□□□ -2.2
SEC61A2Q9H9S3 AC138869.1-201ENST00000568623 124 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 164.9 ms