Protein–RNA interactions for Protein: Q9BTX1

NDC1, Nucleoporin NDC1, humanhuman

Predictions only

Length 674 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1Q9BTX1 Y_RNA.191-201ENST00000363972 113 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 RNU6-820P-201ENST00000384273 107 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 RNY1P4-201ENST00000384595 115 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 MIR516A2-201ENST00000384888 90 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 MIR516A1-201ENST00000385033 90 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 SNORD100-201ENST00000408573 76 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 RNU6-267P-201ENST00000516714 103 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 RNA5SP102-201ENST00000516865 106 ntBASIC1.23□□□□□ -2.21
NDC1Q9BTX1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
NDC1Q9BTX1 RNY1P1-201ENST00000364372 112 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 RNU6-219P-201ENST00000364728 107 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 SNORA25.8-201ENST00000364831 128 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 RNU6-675P-201ENST00000384236 104 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 RNU6-364P-201ENST00000384387 107 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 SNORA40.6-201ENST00000391153 128 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 RNU7-106P-201ENST00000459514 67 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 AC004223.1-201ENST00000479840 271 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 MIR4804-201ENST00000581683 73 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 IGLL4P-201ENST00000614590 133 ntBASIC1.22□□□□□ -2.21
NDC1Q9BTX1 MIR1-1-201ENST00000362147 71 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 MIR26B-201ENST00000362251 77 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 MIR100-201ENST00000385259 80 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 MIR938-201ENST00000401216 83 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 Y_RNA.620-201ENST00000411009 88 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 RNU6-977P-201ENST00000516411 103 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 RNU6-765P-201ENST00000516916 99 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 snoMBII-202.2-201ENST00000517263 86 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 MIR3660-201ENST00000584845 100 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 SNORD92-201ENST00000585078 85 ntBASIC1.21□□□□□ -2.22
NDC1Q9BTX1 SNORD36A-201ENST00000362874 73 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 Y_RNA.73-201ENST00000362910 113 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 Y_RNA.536-201ENST00000384621 113 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 MIR19B1-201ENST00000384829 87 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 MIR635-201ENST00000384830 98 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 SNORD63B-201ENST00000411005 70 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 RNU7-102P-201ENST00000458948 62 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 TRAJ51-201ENST00000504127 63 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 Y_RNA.697-201ENST00000516776 113 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 MIR4452-201ENST00000583004 71 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.2□□□□□ -2.22
NDC1Q9BTX1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.19□□□□□ -2.22
NDC1Q9BTX1 RNA5SP173-201ENST00000364857 136 ntBASIC1.19□□□□□ -2.22
NDC1Q9BTX1 RNU6-1254P-201ENST00000391266 104 ntBASIC1.19□□□□□ -2.22
NDC1Q9BTX1 RNU6-592P-201ENST00000411333 103 ntBASIC1.19□□□□□ -2.22
NDC1Q9BTX1 RNU7-56P-201ENST00000458744 62 ntBASIC1.19□□□□□ -2.22
NDC1Q9BTX1 snoU13.18-201ENST00000459483 104 ntBASIC1.19□□□□□ -2.22
NDC1Q9BTX1 MIR548H5-201ENST00000580314 60 ntBASIC1.19□□□□□ -2.22
NDC1Q9BTX1 AC008608.1-201ENST00000603910 127 ntBASIC1.19□□□□□ -2.22
NDC1Q9BTX1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
NDC1Q9BTX1 RNU6-1152P-201ENST00000384576 107 ntBASIC1.18□□□□□ -2.22
NDC1Q9BTX1 RNU6-243P-201ENST00000391140 107 ntBASIC1.18□□□□□ -2.22
NDC1Q9BTX1 MIR1827-201ENST00000408549 66 ntBASIC1.18□□□□□ -2.22
NDC1Q9BTX1 RNU6-519P-201ENST00000410590 108 ntBASIC1.18□□□□□ -2.22
NDC1Q9BTX1 FABP5P4-201ENST00000437203 171 ntBASIC1.18□□□□□ -2.22
NDC1Q9BTX1 AL161932.1-201ENST00000437408 146 ntBASIC1.18□□□□□ -2.22
NDC1Q9BTX1 AC022137.1-201ENST00000483735 151 ntBASIC1.18□□□□□ -2.22
NDC1Q9BTX1 AC068338.1-201ENST00000565567 176 ntBASIC1.18□□□□□ -2.22
NDC1Q9BTX1 RNU6-573P-201ENST00000383938 106 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 MIR520F-201ENST00000384824 87 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 MIR200A-201ENST00000384875 90 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 AC092628.1-201ENST00000436250 252 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 snoU13.11-201ENST00000459219 104 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 Y_RNA.648-201ENST00000459455 110 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 RNU6-448P-201ENST00000517052 107 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 RNA5SP404-201ENST00000517118 132 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 AL078603.1-201ENST00000603824 313 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 RNU7-10P-201ENST00000607194 63 ntBASIC1.17□□□□□ -2.22
NDC1Q9BTX1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.17□□□□□ -2.22
NDC1Q9BTX1 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
NDC1Q9BTX1 MIR489-201ENST00000384923 84 ntBASIC1.16□□□□□ -2.22
NDC1Q9BTX1 RNU1-119P-201ENST00000391122 165 ntBASIC1.16□□□□□ -2.22
NDC1Q9BTX1 RNU7-195P-201ENST00000458793 62 ntBASIC1.16□□□□□ -2.22
NDC1Q9BTX1 RNU7-85P-201ENST00000458851 63 ntBASIC1.16□□□□□ -2.22
NDC1Q9BTX1 SNORD4B-201ENST00000459083 72 ntBASIC1.16□□□□□ -2.22
NDC1Q9BTX1 AL136317.1-201ENST00000612653 226 ntBASIC1.16□□□□□ -2.22
NDC1Q9BTX1 RNU6-633P-201ENST00000362612 103 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 RNU6-509P-201ENST00000363519 107 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 SNORD115-27-201ENST00000364430 82 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 SNORD114-22-201ENST00000365423 72 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 RNU6-291P-201ENST00000384720 107 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 RNU6-535P-201ENST00000384722 107 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 MIR942-201ENST00000401111 86 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.15□□□□□ -2.23
NDC1Q9BTX1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.15□□□□□ -2.23
NDC1Q9BTX1 RNA5SP245-201ENST00000364239 121 ntBASIC1.14□□□□□ -2.23
NDC1Q9BTX1 RNU6-497P-201ENST00000365316 104 ntBASIC1.14□□□□□ -2.23
NDC1Q9BTX1 MIR519A1-201ENST00000385257 85 ntBASIC1.14□□□□□ -2.23
NDC1Q9BTX1 SNORD124-201ENST00000459577 104 ntBASIC1.14□□□□□ -2.23
NDC1Q9BTX1 Y_RNA.809-201ENST00000516058 95 ntBASIC1.14□□□□□ -2.23
NDC1Q9BTX1 RMST_2.1-201ENST00000617263 136 ntBASIC1.14□□□□□ -2.23
NDC1Q9BTX1 MIR548BB-201ENST00000626714 66 ntBASIC1.14□□□□□ -2.23
NDC1Q9BTX1 SNORD114-24-201ENST00000365029 72 ntBASIC1.13□□□□□ -2.23
NDC1Q9BTX1 RNU6-979P-201ENST00000383896 107 ntBASIC1.13□□□□□ -2.23
NDC1Q9BTX1 SNORD89-201ENST00000390981 114 ntBASIC1.13□□□□□ -2.23
NDC1Q9BTX1 Y_RNA.611-201ENST00000410682 108 ntBASIC1.13□□□□□ -2.23
NDC1Q9BTX1 U7.7-201ENST00000459276 60 ntBASIC1.13□□□□□ -2.23
NDC1Q9BTX1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 291.3 ms