Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.89□□□□□ -2.11
SYNGAP1Q96PV0 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
SYNGAP1Q96PV0 SNORD33-201ENST00000362761 85 ntBASIC1.88□□□□□ -2.11
SYNGAP1Q96PV0 RNU1-36P-201ENST00000365130 165 ntBASIC1.88□□□□□ -2.11
SYNGAP1Q96PV0 SNORD83.1-201ENST00000411362 77 ntBASIC1.88□□□□□ -2.11
SYNGAP1Q96PV0 snoU13.11-201ENST00000459219 104 ntBASIC1.88□□□□□ -2.11
SYNGAP1Q96PV0 MIR3122-201ENST00000577243 73 ntBASIC1.88□□□□□ -2.11
SYNGAP1Q96PV0 MIR3664-201ENST00000579074 99 ntBASIC1.88□□□□□ -2.11
SYNGAP1Q96PV0 MIR6788-201ENST00000618842 66 ntBASIC1.88□□□□□ -2.11
SYNGAP1Q96PV0 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
SYNGAP1Q96PV0 MIR96-201ENST00000362288 78 ntBASIC1.87□□□□□ -2.11
SYNGAP1Q96PV0 RNU6-1254P-201ENST00000391266 104 ntBASIC1.87□□□□□ -2.11
SYNGAP1Q96PV0 MIR889-201ENST00000401280 79 ntBASIC1.87□□□□□ -2.11
SYNGAP1Q96PV0 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.87□□□□□ -2.11
SYNGAP1Q96PV0 MIR18B-201ENST00000454574 71 ntBASIC1.87□□□□□ -2.11
SYNGAP1Q96PV0 snoU13.21-201ENST00000459368 105 ntBASIC1.87□□□□□ -2.11
SYNGAP1Q96PV0 MIR4662A-201ENST00000637499 67 ntBASIC1.87□□□□□ -2.11
SYNGAP1Q96PV0 MIR377-201ENST00000362145 69 ntBASIC1.86□□□□□ -2.11
SYNGAP1Q96PV0 MIR1257-201ENST00000408490 117 ntBASIC1.86□□□□□ -2.11
SYNGAP1Q96PV0 AC015818.7-201ENST00000428754 109 ntBASIC1.86□□□□□ -2.11
SYNGAP1Q96PV0 RNU7-85P-201ENST00000458851 63 ntBASIC1.86□□□□□ -2.11
SYNGAP1Q96PV0 Y_RNA.648-201ENST00000459455 110 ntBASIC1.86□□□□□ -2.11
SYNGAP1Q96PV0 AP003716.2-201ENST00000528260 108 ntBASIC1.86□□□□□ -2.11
SYNGAP1Q96PV0 SNORD53B-201ENST00000577887 78 ntBASIC1.86□□□□□ -2.11
SYNGAP1Q96PV0 AC013244.2-201ENST00000603396 103 ntBASIC1.86□□□□□ -2.11
SYNGAP1Q96PV0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
SYNGAP1Q96PV0 RNU7-185P-201ENST00000459215 60 ntBASIC1.85□□□□□ -2.11
SYNGAP1Q96PV0 SNORA25.13-201ENST00000516395 103 ntBASIC1.85□□□□□ -2.11
SYNGAP1Q96PV0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-466P-201ENST00000391224 103 ntBASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 AC048334.1-201ENST00000477975 159 ntBASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-1194P-201ENST00000516208 104 ntBASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 RN7SKP88-201ENST00000516847 250 ntBASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 7SK.8-201ENST00000612110 250 ntBASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 7SK.11-201ENST00000615477 250 ntBASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 7SK.13-201ENST00000622040 250 ntBASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
SYNGAP1Q96PV0 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 MIR302D-201ENST00000362275 68 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 RNU1-42P-201ENST00000364033 160 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-934P-201ENST00000365154 107 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 MIR635-201ENST00000384830 98 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 Y_RNA.588-201ENST00000391254 102 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 SNORD63B-201ENST00000411005 70 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 RNU7-106P-201ENST00000459514 67 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 AL512310.8-201ENST00000550183 120 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 AC019288.1-201ENST00000557918 224 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 AC140658.3-201ENST00000567603 271 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 AL645939.4-201ENST00000604495 135 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 AC008163.1-202ENST00000636004 2889 ntBASIC1.83□□□□□ -2.12
SYNGAP1Q96PV0 Y_RNA.13-201ENST00000362403 112 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 SNORD36A-201ENST00000362874 73 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 Y_RNA.94-201ENST00000363068 106 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-811P-201ENST00000384069 107 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-165P-201ENST00000517170 99 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 AC023827.1-201ENST00000569247 97 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 MIR4771-2-201ENST00000577758 74 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 MIR4771-1-201ENST00000582617 74 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.82□□□□□ -2.12
SYNGAP1Q96PV0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-776P-201ENST00000364403 104 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-1022P-201ENST00000365049 104 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-580P-201ENST00000365159 107 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 MIR520E-201ENST00000384867 87 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-129P-201ENST00000391022 107 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 SNORD100-201ENST00000408573 76 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 RPS29P1-201ENST00000465274 159 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 MIR4712-201ENST00000583750 82 ntBASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
SYNGAP1Q96PV0 SNORD113.3-201ENST00000364630 78 ntBASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-1296P-201ENST00000383879 107 ntBASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 MIR548J-201ENST00000408833 112 ntBASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 AL450471.1-201ENST00000447509 127 ntBASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 SNORA31.2-201ENST00000516019 134 ntBASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 MIR4421-201ENST00000578133 69 ntBASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 MIR4796-201ENST00000580742 81 ntBASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 AL157834.3-201ENST00000615543 103 ntBASIC1.8□□□□□ -2.12
SYNGAP1Q96PV0 Y_RNA.283-201ENST00000364798 112 ntBASIC1.79□□□□□ -2.12
SYNGAP1Q96PV0 Y_RNA.536-201ENST00000384621 113 ntBASIC1.79□□□□□ -2.12
SYNGAP1Q96PV0 SNORA67.6-201ENST00000391093 99 ntBASIC1.79□□□□□ -2.12
SYNGAP1Q96PV0 AC098934.3-201ENST00000430450 190 ntBASIC1.79□□□□□ -2.12
SYNGAP1Q96PV0 RNU7-195P-201ENST00000458793 62 ntBASIC1.79□□□□□ -2.12
SYNGAP1Q96PV0 RNU6-957P-201ENST00000363652 99 ntBASIC1.78□□□□□ -2.12
SYNGAP1Q96PV0 MIR517C-201ENST00000385103 95 ntBASIC1.78□□□□□ -2.12
SYNGAP1Q96PV0 RNA5SP292-201ENST00000390974 118 ntBASIC1.78□□□□□ -2.12
SYNGAP1Q96PV0 MIR934-201ENST00000401241 83 ntBASIC1.78□□□□□ -2.12
SYNGAP1Q96PV0 Y_RNA.697-201ENST00000516776 113 ntBASIC1.78□□□□□ -2.12
SYNGAP1Q96PV0 MIR548H5-201ENST00000580314 60 ntBASIC1.78□□□□□ -2.12
SYNGAP1Q96PV0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.78□□□□□ -2.12
SYNGAP1Q96PV0 MIRLET7F1-201ENST00000362202 87 ntBASIC1.77□□□□□ -2.13
SYNGAP1Q96PV0 RNU6-994P-201ENST00000410507 111 ntBASIC1.77□□□□□ -2.13
SYNGAP1Q96PV0 TRAJ51-201ENST00000504127 63 ntBASIC1.77□□□□□ -2.13
SYNGAP1Q96PV0 SNORA18.5-201ENST00000516616 101 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 133.4 ms