Protein–RNA interactions for Protein: Q96PE6

ZIM3, Zinc finger imprinted 3, humanhuman

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIM3Q96PE6 RNU6-535P-201ENST00000384722 107 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 AC109327.2-201ENST00000448339 378 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 AC244505.6-201ENST00000452829 130 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 RNU6-795P-201ENST00000516323 103 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 RNU6-412P-201ENST00000516434 106 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.697-201ENST00000516776 113 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 CYP3A137P-201ENST00000562436 69 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 AC011195.1-201ENST00000578177 177 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 AL136317.1-201ENST00000612653 226 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 AL512310.12-203ENST00000640543 90 ntBASIC0.5□□□□□ -2.33
ZIM3Q96PE6 RNU6-766P-201ENST00000362478 107 ntBASIC0.49□□□□□ -2.33
ZIM3Q96PE6 RNU6-170P-201ENST00000362832 104 ntBASIC0.49□□□□□ -2.33
ZIM3Q96PE6 RNU6-153P-201ENST00000364422 104 ntBASIC0.49□□□□□ -2.33
ZIM3Q96PE6 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.49□□□□□ -2.33
ZIM3Q96PE6 AC141557.1-201ENST00000540982 400 ntBASIC0.49□□□□□ -2.33
ZIM3Q96PE6 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.48□□□□□ -2.33
ZIM3Q96PE6 SNORD36A-201ENST00000362874 73 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.81-201ENST00000362997 102 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.95-201ENST00000363079 95 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 RNU6-640P-201ENST00000363693 105 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.348-201ENST00000365403 103 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 SNORA51.5-201ENST00000384126 131 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 MIR516A2-201ENST00000384888 90 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 MIR516A1-201ENST00000385033 90 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 SNORD63B-201ENST00000411005 70 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 RNU6-1053P-201ENST00000515930 101 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 RNA5SP121-201ENST00000516537 101 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 RNU7-161P-201ENST00000517289 62 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 DEFB131E-201ENST00000532329 154 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 MIR3678-201ENST00000578455 94 ntBASIC0.48□□□□□ -2.33
ZIM3Q96PE6 RNA5SP403-201ENST00000363598 108 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 RNA5SP499-201ENST00000363982 119 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.338-201ENST00000365320 114 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 RNU6-756P-201ENST00000383997 107 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.601-201ENST00000410500 113 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 RNU7-195P-201ENST00000458793 62 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 RNU6-1265P-201ENST00000516342 103 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 RNU4ATAC9P-201ENST00000517146 126 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 MIR6828-201ENST00000636181 60 ntBASIC0.47□□□□□ -2.33
ZIM3Q96PE6 Y_RNA.342-201ENST00000365352 113 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 RNU6-905P-201ENST00000384434 107 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 SNORD28-201ENST00000384706 75 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.567-201ENST00000384736 106 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 MIR181B2-201ENST00000385004 89 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
ZIM3Q96PE6 SCARNA23-201ENST00000516060 130 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 RNU4-54P-201ENST00000516428 129 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 RNA5SP94-201ENST00000516917 108 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 RNA5SP47-201ENST00000517230 109 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 RNU6-90P-201ENST00000606352 106 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 RNU6-86P-201ENST00000606534 107 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 AP001318.4-201ENST00000616637 121 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 AC025521.1-201ENST00000621624 286 ntBASIC0.46□□□□□ -2.34
ZIM3Q96PE6 MIR337-201ENST00000362281 93 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 RNA5SP432-201ENST00000362480 116 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 RNU6-1260P-201ENST00000362944 107 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 MIR1302-5-201ENST00000408164 150 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 MIR1276-201ENST00000408707 83 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 AL161932.1-201ENST00000437408 146 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 SPINT5P-201ENST00000448174 155 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 AC097635.1-201ENST00000450678 155 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 RNU6-158P-201ENST00000517104 100 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 MIR548H5-201ENST00000580314 60 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 RNU1-29P-201ENST00000606574 126 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.818-201ENST00000618813 71 ntBASIC0.45□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.174-201ENST00000363781 105 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 RNA5SP517-201ENST00000364724 117 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 MIR488-201ENST00000365739 83 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 RNU6-644P-201ENST00000391155 98 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 RNA5SP222-201ENST00000411039 105 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 AL031737.1-201ENST00000450125 223 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 RNU7-85P-201ENST00000458851 63 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 RNU7-61P-201ENST00000515897 61 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 RNU6-75P-201ENST00000515944 104 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.659-201ENST00000515994 113 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.44□□□□□ -2.34
ZIM3Q96PE6 AL513043.2-201ENST00000573941 143 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 MIR548AG2-201ENST00000581228 64 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 MIR4439-201ENST00000583746 80 ntBASIC0.44□□□□□ -2.34
ZIM3Q96PE6 MIR101-2-201ENST00000362195 79 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.57-201ENST00000362806 113 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 RNU4-36P-201ENST00000364294 144 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 SNORD45B-201ENST00000364617 72 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 SNORD114-22-201ENST00000365423 72 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 MIR635-201ENST00000384830 98 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 MIR599-201ENST00000385069 95 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 MIR140-201ENST00000385282 100 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 MTATP8P2-201ENST00000435212 202 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 snoU13.11-201ENST00000459219 104 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 MTND5P40-201ENST00000559945 246 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 AC138869.1-201ENST00000568623 124 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 MIR4714-201ENST00000580728 77 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 MIR4639-201ENST00000584938 69 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 MTRNR2L2-201ENST00000604882 87 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 AC103810.7-201ENST00000607821 91 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 AC244669.1-204ENST00000621564 178 ntBASIC0.43□□□□□ -2.34
ZIM3Q96PE6 SNORD115-24-201ENST00000363528 82 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 RNU6-726P-201ENST00000364680 107 ntBASIC0.42□□□□□ -2.34
ZIM3Q96PE6 Y_RNA.290-201ENST00000364879 114 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 164.6 ms