Protein–RNA interactions for Protein: Q96NZ1

FOXN4, Forkhead box protein N4, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4Q96NZ1 Y_RNA.540-201ENST00000384638 111 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 MIR520H-201ENST00000385126 88 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 MIR548G-201ENST00000408442 89 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.601-201ENST00000410500 113 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 AC109327.2-201ENST00000448339 378 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 RNU6-537P-201ENST00000517277 103 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 AC096720.1-201ENST00000604441 183 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 AC012531.4-201ENST00000616509 177 ntBASIC0.68□□□□□ -2.3
FOXN4Q96NZ1 MIR101-2-201ENST00000362195 79 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.78-201ENST00000362970 110 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.467-201ENST00000384297 102 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.495-201ENST00000384435 112 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 SNORD38.2-201ENST00000384470 69 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 AC004941.2-201ENST00000427009 228 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 U7.7-201ENST00000459276 60 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 SCARNA23-201ENST00000516060 130 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 RNU6-1110P-201ENST00000516462 101 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.697-201ENST00000516776 113 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 RNA5SP480-201ENST00000516840 109 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 RNU6-90P-201ENST00000606352 106 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 RNU6-86P-201ENST00000606534 107 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 MIR6835-201ENST00000621552 64 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 MIR6866-201ENST00000638146 69 ntBASIC0.67□□□□□ -2.3
FOXN4Q96NZ1 Y_RNA.10-201ENST00000362371 110 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNU6-170P-201ENST00000362832 104 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNU6-1163P-201ENST00000364516 107 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNU6-32P-201ENST00000383948 107 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNU6-13P-201ENST00000384248 107 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNU6-12P-201ENST00000384604 107 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNU6-41P-201ENST00000384741 107 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 SNORD105-201ENST00000386910 85 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNA5SP89-201ENST00000410300 108 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNU6-1194P-201ENST00000516208 104 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 RNA5SP255-201ENST00000516370 107 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 AC138907.6-201ENST00000568401 126 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 MIR4714-201ENST00000580728 77 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 AL136317.1-201ENST00000612653 226 ntBASIC0.66□□□□□ -2.3
FOXN4Q96NZ1 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.95-201ENST00000363079 95 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 SNORD45B-201ENST00000364617 72 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.567-201ENST00000384736 106 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 MIR7-2-201ENST00000384970 110 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 SNORD100-201ENST00000408573 76 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 RNU6-168P-201ENST00000516189 101 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 RNU6-850P-201ENST00000516934 103 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 MIR4777-201ENST00000583710 86 ntBASIC0.65□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.107-201ENST00000363190 121 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 SNORD114-26-201ENST00000363543 72 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 RNA5SP245-201ENST00000364239 121 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.536-201ENST00000384621 113 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.544-201ENST00000384650 113 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 RNU6-291P-201ENST00000384720 107 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 RNU6-535P-201ENST00000384722 107 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 RNU6-644P-201ENST00000391155 98 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 SNORD99-201ENST00000408612 74 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 MTATP6P29-201ENST00000415057 132 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 SNRPGP12-201ENST00000449481 213 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 RNU6-765P-201ENST00000516916 99 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 RNU6-448P-201ENST00000517052 107 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 AP001318.4-201ENST00000616637 121 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.818-201ENST00000618813 71 ntBASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.64□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.173-201ENST00000363776 113 ntBASIC0.63□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.348-201ENST00000365403 103 ntBASIC0.63□□□□□ -2.31
FOXN4Q96NZ1 TRAJ51-201ENST00000504127 63 ntBASIC0.63□□□□□ -2.31
FOXN4Q96NZ1 RNU7-61P-201ENST00000515897 61 ntBASIC0.63□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.677-201ENST00000516401 85 ntBASIC0.63□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.57-201ENST00000362806 113 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 RNU6-571P-201ENST00000384128 107 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 RNU6-905P-201ENST00000384434 107 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 MIR635-201ENST00000384830 98 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 MIR508-201ENST00000384857 115 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 MIR516A2-201ENST00000384888 90 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 MIR181B2-201ENST00000385004 89 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 MIR516A1-201ENST00000385033 90 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 RNU7-106P-201ENST00000459514 67 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 RNU6-162P-201ENST00000516228 103 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 SNORA40.13-201ENST00000516379 120 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 AC011195.1-201ENST00000578177 177 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 AC025627.3-201ENST00000582078 182 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 AL590095.2-201ENST00000604136 117 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 AC103810.7-201ENST00000607821 91 ntBASIC0.62□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.32-201ENST00000362589 110 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.56-201ENST00000362798 112 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.93-201ENST00000363066 109 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 RNU6-1244P-201ENST00000363614 108 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 RNU6-640P-201ENST00000363693 105 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 Y_RNA.342-201ENST00000365352 113 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 RNU6-813P-201ENST00000384691 107 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 SNORD63B-201ENST00000411005 70 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 MTATP8P2-201ENST00000435212 202 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 AC092628.1-201ENST00000436250 252 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 AC002350.1-201ENST00000490759 375 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 SNORA31.14-201ENST00000516728 116 ntBASIC0.61□□□□□ -2.31
FOXN4Q96NZ1 AP003327.1-201ENST00000529684 127 ntBASIC0.61□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 258.3 ms