Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.58□□□□□ -2
LRCH3Q96II8 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
LRCH3Q96II8 RNA5SP210-201ENST00000391034 120 ntBASIC2.58□□□□□ -2
LRCH3Q96II8 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.58□□□□□ -2
LRCH3Q96II8 RNA5SP480-201ENST00000516840 109 ntBASIC2.58□□□□□ -2
LRCH3Q96II8 AC015688.6-201ENST00000577737 104 ntBASIC2.58□□□□□ -2
LRCH3Q96II8 Evf-2_5p.1-201ENST00000614213 142 ntBASIC2.58□□□□□ -2
LRCH3Q96II8 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.58□□□□□ -2
LRCH3Q96II8 RNU6-668P-201ENST00000364180 107 ntBASIC2.57□□□□□ -2
LRCH3Q96II8 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
LRCH3Q96II8 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.57□□□□□ -2
LRCH3Q96II8 SNORD83.1-201ENST00000411362 77 ntBASIC2.57□□□□□ -2
LRCH3Q96II8 MTND4LP1-201ENST00000446263 157 ntBASIC2.57□□□□□ -2
LRCH3Q96II8 TRMT112P2-201ENST00000512910 132 ntBASIC2.57□□□□□ -2
LRCH3Q96II8 RNU6-287P-201ENST00000516230 98 ntBASIC2.57□□□□□ -2
LRCH3Q96II8 RNU6-542P-201ENST00000516405 103 ntBASIC2.57□□□□□ -2
LRCH3Q96II8 RNA5SP245-201ENST00000364239 121 ntBASIC2.56□□□□□ -2
LRCH3Q96II8 Y_RNA.375-201ENST00000365625 101 ntBASIC2.56□□□□□ -2
LRCH3Q96II8 SNORA6-201ENST00000384033 151 ntBASIC2.56□□□□□ -2
LRCH3Q96II8 AC026436.1-201ENST00000510537 270 ntBASIC2.56□□□□□ -2
LRCH3Q96II8 MIR4529-201ENST00000578110 78 ntBASIC2.56□□□□□ -2
LRCH3Q96II8 MIR3920-201ENST00000581751 86 ntBASIC2.56□□□□□ -2
LRCH3Q96II8 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.56□□□□□ -2
LRCH3Q96II8 Z82195.2-201ENST00000612348 18351 ntBASIC2.56□□□□□ -2
LRCH3Q96II8 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
LRCH3Q96II8 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
LRCH3Q96II8 VTRNA1-1-201ENST00000363120 99 ntBASIC2.55□□□□□ -2
LRCH3Q96II8 SNORA3A-201ENST00000364113 130 ntBASIC2.55□□□□□ -2
LRCH3Q96II8 RNA5SP192-201ENST00000364404 120 ntBASIC2.55□□□□□ -2
LRCH3Q96II8 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.55□□□□□ -2
LRCH3Q96II8 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.55□□□□□ -2
LRCH3Q96II8 MIR466-201ENST00000580653 84 ntBASIC2.55□□□□□ -2
LRCH3Q96II8 AL359821.1-201ENST00000605519 182 ntBASIC2.55□□□□□ -2
LRCH3Q96II8 MIR7978-201ENST00000636158 59 ntBASIC2.55□□□□□ -2
LRCH3Q96II8 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
LRCH3Q96II8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.55□□□□□ -2
LRCH3Q96II8 RNU6-369P-201ENST00000362515 102 ntBASIC2.54□□□□□ -2
LRCH3Q96II8 SNORA25.5-201ENST00000363782 126 ntBASIC2.54□□□□□ -2
LRCH3Q96II8 SNORD75.2-201ENST00000408784 58 ntBASIC2.54□□□□□ -2
LRCH3Q96II8 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
LRCH3Q96II8 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LRCH3Q96II8 SNORA16B-201ENST00000364674 135 ntBASIC2.53□□□□□ -2
LRCH3Q96II8 RNU7-193P-201ENST00000516723 65 ntBASIC2.53□□□□□ -2
LRCH3Q96II8 MIR3670-2-201ENST00000582974 65 ntBASIC2.53□□□□□ -2
LRCH3Q96II8 MIR3670-1-201ENST00000584160 65 ntBASIC2.53□□□□□ -2
LRCH3Q96II8 MIR3670-3-201ENST00000584855 65 ntBASIC2.53□□□□□ -2
LRCH3Q96II8 MIR3670-4-201ENST00000612260 65 ntBASIC2.53□□□□□ -2
LRCH3Q96II8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
LRCH3Q96II8 SNORA31.11-201ENST00000516528 139 ntBASIC2.52□□□□□ -2.01
LRCH3Q96II8 Y_RNA.722-201ENST00000517279 114 ntBASIC2.52□□□□□ -2.01
LRCH3Q96II8 MIR1291-201ENST00000627649 87 ntBASIC2.52□□□□□ -2.01
LRCH3Q96II8 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.51□□□□□ -2.01
LRCH3Q96II8 RNU6-446P-201ENST00000362827 106 ntBASIC2.51□□□□□ -2.01
LRCH3Q96II8 MIR125B2-201ENST00000385128 89 ntBASIC2.51□□□□□ -2.01
LRCH3Q96II8 AL645939.4-201ENST00000604495 135 ntBASIC2.51□□□□□ -2.01
LRCH3Q96II8 AC103810.8-201ENST00000607347 118 ntBASIC2.51□□□□□ -2.01
LRCH3Q96II8 MIR219B-201ENST00000637023 88 ntBASIC2.51□□□□□ -2.01
LRCH3Q96II8 RNU6-940P-201ENST00000363433 104 ntBASIC2.5□□□□□ -2.01
LRCH3Q96II8 DEFA7P-201ENST00000382676 285 ntBASIC2.5□□□□□ -2.01
LRCH3Q96II8 RNU6-1039P-201ENST00000383931 107 ntBASIC2.5□□□□□ -2.01
LRCH3Q96II8 RNU1-52P-201ENST00000384190 164 ntBASIC2.5□□□□□ -2.01
LRCH3Q96II8 RNU6-535P-201ENST00000384722 107 ntBASIC2.5□□□□□ -2.01
LRCH3Q96II8 SNORA77B-201ENST00000578179 125 ntBASIC2.5□□□□□ -2.01
LRCH3Q96II8 AC010297.1-201ENST00000623948 149 ntBASIC2.5□□□□□ -2.01
LRCH3Q96II8 AC073869.9-201ENST00000641610 120 ntBASIC2.5□□□□□ -2.01
LRCH3Q96II8 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
LRCH3Q96II8 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.5□□□□□ -2.01
LRCH3Q96II8 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LRCH3Q96II8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.49□□□□□ -2.01
LRCH3Q96II8 RNU7-24P-201ENST00000458867 62 ntBASIC2.49□□□□□ -2.01
LRCH3Q96II8 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.49□□□□□ -2.01
LRCH3Q96II8 NAMPTP3-201ENST00000569273 224 ntBASIC2.49□□□□□ -2.01
LRCH3Q96II8 MIR6509-201ENST00000614603 85 ntBASIC2.49□□□□□ -2.01
LRCH3Q96II8 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
LRCH3Q96II8 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
LRCH3Q96II8 RNU6-934P-201ENST00000365154 107 ntBASIC2.48□□□□□ -2.01
LRCH3Q96II8 SNORD115-44-201ENST00000365391 82 ntBASIC2.48□□□□□ -2.01
LRCH3Q96II8 MIR203A-201ENST00000384836 110 ntBASIC2.48□□□□□ -2.01
LRCH3Q96II8 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
LRCH3Q96II8 AC244505.6-201ENST00000452829 130 ntBASIC2.48□□□□□ -2.01
LRCH3Q96II8 SCARNA21.1-201ENST00000515996 128 ntBASIC2.48□□□□□ -2.01
LRCH3Q96II8 MIR4771-2-201ENST00000577758 74 ntBASIC2.48□□□□□ -2.01
LRCH3Q96II8 MIR4771-1-201ENST00000582617 74 ntBASIC2.48□□□□□ -2.01
LRCH3Q96II8 MIR5092-201ENST00000583139 88 ntBASIC2.48□□□□□ -2.01
LRCH3Q96II8 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.48□□□□□ -2.01
LRCH3Q96II8 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
LRCH3Q96II8 RNU6-495P-201ENST00000362995 107 ntBASIC2.47□□□□□ -2.01
LRCH3Q96II8 RNA5SP456-201ENST00000364002 114 ntBASIC2.47□□□□□ -2.01
LRCH3Q96II8 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
LRCH3Q96II8 RNA5SP181-201ENST00000410246 98 ntBASIC2.47□□□□□ -2.01
LRCH3Q96II8 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LRCH3Q96II8 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
LRCH3Q96II8 AC016717.2-201ENST00000609089 5141 ntBASIC2.47□□□□□ -2.01
LRCH3Q96II8 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
LRCH3Q96II8 MIR6073-201ENST00000352083 89 ntBASIC2.46□□□□□ -2.02
LRCH3Q96II8 RNA5SP276-201ENST00000362580 94 ntBASIC2.46□□□□□ -2.02
LRCH3Q96II8 AC008608.1-201ENST00000603910 127 ntBASIC2.46□□□□□ -2.02
LRCH3Q96II8 AL137847.3-201ENST00000611521 109 ntBASIC2.46□□□□□ -2.02
LRCH3Q96II8 MIR6779-201ENST00000617283 64 ntBASIC2.45□□□□□ -2.02
LRCH3Q96II8 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 181.3 ms