Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 SNORA9.1-201ENST00000362412 131 ntBASIC2.69□□□□□ -1.98
MS4A3Q96HJ5 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.69□□□□□ -1.98
MS4A3Q96HJ5 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC2.69□□□□□ -1.98
MS4A3Q96HJ5 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
MS4A3Q96HJ5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MS4A3Q96HJ5 SNORA25.8-201ENST00000364831 128 ntBASIC2.68□□□□□ -1.98
MS4A3Q96HJ5 RPS29P6-201ENST00000438196 145 ntBASIC2.68□□□□□ -1.98
MS4A3Q96HJ5 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
MS4A3Q96HJ5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 SNORA54-201ENST00000384281 123 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 MIR758-201ENST00000390227 88 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 RNU6-696P-201ENST00000390834 107 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 SNORA75.2-201ENST00000391138 150 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 SNORA75.3-201ENST00000391231 150 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 RNU7-193P-201ENST00000516723 65 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 MIR8074-201ENST00000615081 81 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 AL157834.3-201ENST00000615543 103 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 MIR8063-201ENST00000621930 81 ntBASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
MS4A3Q96HJ5 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 MIR422A-201ENST00000362286 90 ntBASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 SNORA3A-201ENST00000364113 130 ntBASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 RNU6-1246P-201ENST00000391064 107 ntBASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 RNA5SP341-201ENST00000516261 117 ntBASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 RNU6-135P-201ENST00000516769 101 ntBASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 RNU6-165P-201ENST00000517170 99 ntBASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 MIR622-201ENST00000638396 96 ntBASIC2.66□□□□□ -1.98
MS4A3Q96HJ5 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
MS4A3Q96HJ5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
MS4A3Q96HJ5 MIR22-201ENST00000362190 85 ntBASIC2.65□□□□□ -1.99
MS4A3Q96HJ5 RNU6-810P-201ENST00000364001 107 ntBASIC2.65□□□□□ -1.99
MS4A3Q96HJ5 RNU1-141P-201ENST00000364623 158 ntBASIC2.65□□□□□ -1.99
MS4A3Q96HJ5 SNORA63.6-201ENST00000364921 119 ntBASIC2.65□□□□□ -1.99
MS4A3Q96HJ5 MIR128-1-201ENST00000384921 82 ntBASIC2.65□□□□□ -1.99
MS4A3Q96HJ5 AC022018.1-201ENST00000430685 241 ntBASIC2.65□□□□□ -1.99
MS4A3Q96HJ5 Y_RNA.74-201ENST00000362911 99 ntBASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 MIR517C-201ENST00000385103 95 ntBASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 SNORA48.2-201ENST00000390926 124 ntBASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 SNORA74D-201ENST00000516404 141 ntBASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 AC023827.1-201ENST00000569247 97 ntBASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
MS4A3Q96HJ5 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
MS4A3Q96HJ5 SNORA71.1-201ENST00000364523 117 ntBASIC2.63□□□□□ -1.99
MS4A3Q96HJ5 RNU6-419P-201ENST00000517030 63 ntBASIC2.63□□□□□ -1.99
MS4A3Q96HJ5 MIR4325-201ENST00000583049 90 ntBASIC2.63□□□□□ -1.99
MS4A3Q96HJ5 AL136317.1-201ENST00000612653 226 ntBASIC2.63□□□□□ -1.99
MS4A3Q96HJ5 AL773524.1-201ENST00000614065 229 ntBASIC2.63□□□□□ -1.99
MS4A3Q96HJ5 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
MS4A3Q96HJ5 RNU6-1065P-201ENST00000384513 106 ntBASIC2.62□□□□□ -1.99
MS4A3Q96HJ5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
MS4A3Q96HJ5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 SNORD28-201ENST00000384706 75 ntBASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 MIR100-201ENST00000385259 80 ntBASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 MIR548L-201ENST00000408303 86 ntBASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 AL021921.1-201ENST00000442774 93 ntBASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 RNU5B-6P-201ENST00000516765 68 ntBASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 RNU6-56P-201ENST00000516986 93 ntBASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 RNU6-548P-201ENST00000517083 115 ntBASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 MIR4639-201ENST00000584938 69 ntBASIC2.61□□□□□ -1.99
MS4A3Q96HJ5 AC009487.2-201ENST00000420969 6821 ntBASIC2.6□□□□□ -1.99
MS4A3Q96HJ5 MIR302D-201ENST00000362275 68 ntBASIC2.6□□□□□ -1.99
MS4A3Q96HJ5 SNORD33-201ENST00000362761 85 ntBASIC2.6□□□□□ -1.99
MS4A3Q96HJ5 MIR483-201ENST00000385070 76 ntBASIC2.6□□□□□ -1.99
MS4A3Q96HJ5 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.6□□□□□ -1.99
MS4A3Q96HJ5 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
MS4A3Q96HJ5 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
MS4A3Q96HJ5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
MS4A3Q96HJ5 MIR520F-201ENST00000384824 87 ntBASIC2.59□□□□□ -1.99
MS4A3Q96HJ5 RNA5SP274-201ENST00000410484 108 ntBASIC2.59□□□□□ -1.99
MS4A3Q96HJ5 AC048334.1-201ENST00000477975 159 ntBASIC2.59□□□□□ -1.99
MS4A3Q96HJ5 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
MS4A3Q96HJ5 RNA5SP276-201ENST00000362580 94 ntBASIC2.58□□□□□ -2
MS4A3Q96HJ5 SNORA7.1-201ENST00000363750 139 ntBASIC2.58□□□□□ -2
MS4A3Q96HJ5 SNORD88.1-201ENST00000408684 91 ntBASIC2.58□□□□□ -2
MS4A3Q96HJ5 S100A11P2-201ENST00000467589 312 ntBASIC2.58□□□□□ -2
MS4A3Q96HJ5 AC079140.2-201ENST00000506193 142 ntBASIC2.58□□□□□ -2
MS4A3Q96HJ5 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.58□□□□□ -2
MS4A3Q96HJ5 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
MS4A3Q96HJ5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.57□□□□□ -2
MS4A3Q96HJ5 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.57□□□□□ -2
MS4A3Q96HJ5 MIR1-1-201ENST00000362147 71 ntBASIC2.57□□□□□ -2
MS4A3Q96HJ5 Y_RNA.282-201ENST00000364793 102 ntBASIC2.57□□□□□ -2
MS4A3Q96HJ5 RNU1-52P-201ENST00000384190 164 ntBASIC2.57□□□□□ -2
MS4A3Q96HJ5 MIR527-201ENST00000385244 85 ntBASIC2.57□□□□□ -2
MS4A3Q96HJ5 AL591704.2-201ENST00000421658 181 ntBASIC2.57□□□□□ -2
MS4A3Q96HJ5 AC244669.1-204ENST00000621564 178 ntBASIC2.57□□□□□ -2
MS4A3Q96HJ5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.56□□□□□ -2
MS4A3Q96HJ5 AC080100.1-201ENST00000624239 5356 ntBASIC2.56□□□□□ -2
MS4A3Q96HJ5 RNU6-525P-201ENST00000363685 104 ntBASIC2.56□□□□□ -2
MS4A3Q96HJ5 SNORD1A-201ENST00000364968 72 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms