Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 RNU6-493P-201ENST00000391321 108 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 SNX3P1X-201ENST00000414887 175 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 RNU6-175P-201ENST00000516896 107 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 U6.104-201ENST00000637979 90 ntBASIC-0.77□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.78□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.78□□□□□ -2.53
ECHDC3Q96DC8 RNU6-768P-201ENST00000384683 107 ntBASIC-0.78□□□□□ -2.53
ECHDC3Q96DC8 MIR1302-6-201ENST00000408466 90 ntBASIC-0.78□□□□□ -2.53
ECHDC3Q96DC8 YWHAEP2-201ENST00000580066 112 ntBASIC-0.78□□□□□ -2.53
ECHDC3Q96DC8 AC009779.6-201ENST00000603972 165 ntBASIC-0.78□□□□□ -2.53
ECHDC3Q96DC8 MIR376B-201ENST00000614515 100 ntBASIC-0.78□□□□□ -2.53
ECHDC3Q96DC8 Y_RNA.35-201ENST00000362601 101 ntBASIC-0.79□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.79□□□□□ -2.54
ECHDC3Q96DC8 SNORD115-35-201ENST00000365122 82 ntBASIC-0.79□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.521-201ENST00000384560 114 ntBASIC-0.79□□□□□ -2.54
ECHDC3Q96DC8 SNORD77B-201ENST00000391112 67 ntBASIC-0.79□□□□□ -2.54
ECHDC3Q96DC8 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-0.79□□□□□ -2.54
ECHDC3Q96DC8 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.79□□□□□ -2.54
ECHDC3Q96DC8 SNORD114-29-201ENST00000364819 70 ntBASIC-0.8□□□□□ -2.54
ECHDC3Q96DC8 MIR539-201ENST00000365690 78 ntBASIC-0.8□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.461-201ENST00000384263 103 ntBASIC-0.8□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.8□□□□□ -2.54
ECHDC3Q96DC8 MIR1468-201ENST00000410600 86 ntBASIC-0.8□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.8□□□□□ -2.54
ECHDC3Q96DC8 MTATP6P21-201ENST00000440681 189 ntBASIC-0.8□□□□□ -2.54
ECHDC3Q96DC8 MTCYBP6-201ENST00000441810 138 ntBASIC-0.8□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 RNU6-639P-201ENST00000384074 107 ntBASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.692-201ENST00000516627 105 ntBASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 RNU6-850P-201ENST00000516934 103 ntBASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 MIR3115-201ENST00000577915 68 ntBASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 MIR548AE1-201ENST00000583292 70 ntBASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 U6.106-201ENST00000636360 105 ntBASIC-0.81□□□□□ -2.54
ECHDC3Q96DC8 RNU6-818P-201ENST00000364837 108 ntBASIC-0.82□□□□□ -2.54
ECHDC3Q96DC8 SNORD83B-201ENST00000386745 93 ntBASIC-0.82□□□□□ -2.54
ECHDC3Q96DC8 SNORD58.1-201ENST00000391313 66 ntBASIC-0.82□□□□□ -2.54
ECHDC3Q96DC8 RNA5SP461-201ENST00000516451 104 ntBASIC-0.82□□□□□ -2.54
ECHDC3Q96DC8 AC087741.2-201ENST00000619415 172 ntBASIC-0.82□□□□□ -2.54
ECHDC3Q96DC8 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.83□□□□□ -2.54
ECHDC3Q96DC8 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.83□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.83□□□□□ -2.54
ECHDC3Q96DC8 RNU6-616P-201ENST00000384353 107 ntBASIC-0.83□□□□□ -2.54
ECHDC3Q96DC8 MIR2113-201ENST00000459007 91 ntBASIC-0.83□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.651-201ENST00000459380 103 ntBASIC-0.83□□□□□ -2.54
ECHDC3Q96DC8 RNU6-635P-201ENST00000516651 102 ntBASIC-0.83□□□□□ -2.54
ECHDC3Q96DC8 SNORD114-14-201ENST00000362723 75 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.54-201ENST00000362766 105 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 RNA5SP192-201ENST00000364404 120 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 Y_RNA.556-201ENST00000384677 113 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 RNU6-1104P-201ENST00000384723 104 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 RNA5SP66-201ENST00000517178 101 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 MIR4460-201ENST00000577862 86 ntBASIC-0.84□□□□□ -2.54
ECHDC3Q96DC8 RNU6-24P-201ENST00000384440 107 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 MIR516A2-201ENST00000384888 90 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 MIR516A1-201ENST00000385033 90 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 MIR601-201ENST00000385256 79 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 MT-TY-201ENST00000387409 66 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 SNORA75.5-201ENST00000391291 81 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 Y_RNA.626-201ENST00000411288 95 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 SPINT5P-201ENST00000448174 155 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.85□□□□□ -2.55
ECHDC3Q96DC8 Y_RNA.61-201ENST00000362835 102 ntBASIC-0.86□□□□□ -2.55
ECHDC3Q96DC8 RNU6-154P-201ENST00000384306 106 ntBASIC-0.86□□□□□ -2.55
ECHDC3Q96DC8 RNU6-455P-201ENST00000384681 107 ntBASIC-0.86□□□□□ -2.55
ECHDC3Q96DC8 MIR34C-201ENST00000384831 77 ntBASIC-0.86□□□□□ -2.55
ECHDC3Q96DC8 RNU6-287P-201ENST00000516230 98 ntBASIC-0.86□□□□□ -2.55
ECHDC3Q96DC8 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.87□□□□□ -2.55
ECHDC3Q96DC8 Y_RNA.574-201ENST00000384766 95 ntBASIC-0.87□□□□□ -2.55
ECHDC3Q96DC8 MIR9-2-201ENST00000384838 87 ntBASIC-0.87□□□□□ -2.55
ECHDC3Q96DC8 MIR548H3-201ENST00000408771 118 ntBASIC-0.87□□□□□ -2.55
ECHDC3Q96DC8 RNU4ATAC4P-201ENST00000516307 126 ntBASIC-0.87□□□□□ -2.55
ECHDC3Q96DC8 RNU5B-6P-201ENST00000516765 68 ntBASIC-0.87□□□□□ -2.55
ECHDC3Q96DC8 Y_RNA.65-201ENST00000362846 100 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 RNU6-238P-201ENST00000363313 106 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 RNU6-1244P-201ENST00000363614 108 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 Y_RNA.396-201ENST00000383949 103 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 Y_RNA.435-201ENST00000384095 112 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 SNORA51.5-201ENST00000384126 131 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 SNORA3B-201ENST00000391305 131 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 MIR548F4-201ENST00000408515 105 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 MTATP8P1-201ENST00000467115 207 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 RN7SKP19-201ENST00000516016 252 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 AC007012.1-201ENST00000567192 175 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 MIR378F-201ENST00000578143 78 ntBASIC-0.88□□□□□ -2.55
ECHDC3Q96DC8 RNU6-508P-201ENST00000363231 103 ntBASIC-0.89□□□□□ -2.55
ECHDC3Q96DC8 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.89□□□□□ -2.55
ECHDC3Q96DC8 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.89□□□□□ -2.55
ECHDC3Q96DC8 RNY4P20-201ENST00000516678 93 ntBASIC-0.89□□□□□ -2.55
ECHDC3Q96DC8 MIR3646-201ENST00000578301 84 ntBASIC-0.89□□□□□ -2.55
ECHDC3Q96DC8 U4.2-201ENST00000618561 85 ntBASIC-0.89□□□□□ -2.55
ECHDC3Q96DC8 RNU6-918P-201ENST00000391219 106 ntBASIC-0.9□□□□□ -2.55
ECHDC3Q96DC8 RNU2-38P-201ENST00000410856 79 ntBASIC-0.9□□□□□ -2.55
ECHDC3Q96DC8 MTND2P23-201ENST00000422990 651 ntBASIC-0.9□□□□□ -2.55
ECHDC3Q96DC8 SNORD127-201ENST00000458892 86 ntBASIC-0.9□□□□□ -2.55
Retrieved 100 of 98,524 protein–RNA pairs in 181.7 ms