Protein–RNA interactions for Protein: Q96B97

SH3KBP1, SH3 domain-containing kinase-binding protein 1, humanhuman

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3KBP1Q96B97 MTND5P40-201ENST00000559945 246 ntBASIC0.46□□□□□ -2.34
SH3KBP1Q96B97 AC138869.1-201ENST00000568623 124 ntBASIC0.46□□□□□ -2.34
SH3KBP1Q96B97 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC0.46□□□□□ -2.34
SH3KBP1Q96B97 AC090625.1-201ENST00000357130 210 ntBASIC0.45□□□□□ -2.34
SH3KBP1Q96B97 Y_RNA.221-201ENST00000364248 96 ntBASIC0.45□□□□□ -2.34
SH3KBP1Q96B97 RNA5SP47-201ENST00000517230 109 ntBASIC0.45□□□□□ -2.34
SH3KBP1Q96B97 MIR4639-201ENST00000584938 69 ntBASIC0.45□□□□□ -2.34
SH3KBP1Q96B97 AC243829.6-201ENST00000612652 106 ntBASIC0.45□□□□□ -2.34
SH3KBP1Q96B97 MIR103A1-201ENST00000362165 78 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 SNORD118-201ENST00000363593 134 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 MIR548A1-201ENST00000385041 97 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 RNU6-816P-201ENST00000390914 107 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 RNU6-1268P-201ENST00000391214 107 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 RNU6-1239P-201ENST00000391310 107 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 SCARNA16.5-201ENST00000517114 183 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 MIR4514-201ENST00000581410 57 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 VPS35-212ENST00000640313 141 ntTSL 5 BASIC0.44□□□□□ -2.34
SH3KBP1Q96B97 MIRLET7D-201ENST00000362263 87 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 RNU6-363P-201ENST00000362895 105 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 Y_RNA.362-201ENST00000365518 110 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 RNU6-409P-201ENST00000384114 104 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 Y_RNA.507-201ENST00000384500 99 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 AC069271.1-201ENST00000445577 156 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 Y_RNA.649-201ENST00000459077 103 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 RNU7-10P-201ENST00000607194 63 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 MIR7107-201ENST00000611489 80 ntBASIC0.43□□□□□ -2.34
SH3KBP1Q96B97 SNORD50.2-201ENST00000365465 70 ntBASIC0.42□□□□□ -2.34
SH3KBP1Q96B97 MIR548L-201ENST00000408303 86 ntBASIC0.42□□□□□ -2.34
SH3KBP1Q96B97 SPINT5P-201ENST00000448174 155 ntBASIC0.42□□□□□ -2.34
SH3KBP1Q96B97 RNU7-195P-201ENST00000458793 62 ntBASIC0.42□□□□□ -2.34
SH3KBP1Q96B97 RNU7-104P-201ENST00000459398 79 ntBASIC0.42□□□□□ -2.34
SH3KBP1Q96B97 SNORD33.1-201ENST00000516213 88 ntBASIC0.42□□□□□ -2.34
SH3KBP1Q96B97 SNORD44.1-201ENST00000363202 61 ntBASIC0.41□□□□□ -2.34
SH3KBP1Q96B97 Y_RNA.247-201ENST00000364500 92 ntBASIC0.41□□□□□ -2.34
SH3KBP1Q96B97 MIR599-201ENST00000385069 95 ntBASIC0.41□□□□□ -2.34
SH3KBP1Q96B97 SNORD63B-201ENST00000411005 70 ntBASIC0.41□□□□□ -2.34
SH3KBP1Q96B97 RNU6-659P-201ENST00000516454 104 ntBASIC0.41□□□□□ -2.34
SH3KBP1Q96B97 RNU6-850P-201ENST00000516934 103 ntBASIC0.41□□□□□ -2.34
SH3KBP1Q96B97 MIR3914-2-201ENST00000637339 95 ntBASIC0.41□□□□□ -2.34
SH3KBP1Q96B97 AC091304.10-201ENST00000641554 121 ntBASIC0.41□□□□□ -2.34
SH3KBP1Q96B97 RNU6-1099P-201ENST00000363533 107 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 VTRNA1-3-201ENST00000365645 89 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 SNORD38.2-201ENST00000384470 69 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 Y_RNA.549-201ENST00000384657 102 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 MIR548I2-201ENST00000408348 149 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 RNU6ATAC41P-201ENST00000408600 126 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 AL353813.1-201ENST00000440700 253 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 SNRPGP12-201ENST00000449481 213 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 AC244505.6-201ENST00000452829 130 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 AC007012.1-201ENST00000567192 175 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 MIR2909-201ENST00000617113 69 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 AL035470.1-201ENST00000622571 220 ntBASIC0.4□□□□□ -2.35
SH3KBP1Q96B97 RNU6-170P-201ENST00000362832 104 ntBASIC0.39□□□□□ -2.35
SH3KBP1Q96B97 MIR548A3-201ENST00000385297 97 ntBASIC0.39□□□□□ -2.35
SH3KBP1Q96B97 RNU7-106P-201ENST00000459514 67 ntBASIC0.39□□□□□ -2.35
SH3KBP1Q96B97 RNU6-1333P-201ENST00000516162 93 ntBASIC0.39□□□□□ -2.35
SH3KBP1Q96B97 SNORA62.5-201ENST00000516634 120 ntBASIC0.39□□□□□ -2.35
SH3KBP1Q96B97 RNU7-161P-201ENST00000517289 62 ntBASIC0.39□□□□□ -2.35
SH3KBP1Q96B97 MIR6828-201ENST00000636181 60 ntBASIC0.39□□□□□ -2.35
SH3KBP1Q96B97 AL162726.3-218ENST00000636401 95 ntBASIC0.39□□□□□ -2.35
SH3KBP1Q96B97 Y_RNA.423-201ENST00000384057 113 ntBASIC0.38□□□□□ -2.35
SH3KBP1Q96B97 MIR516A2-201ENST00000384888 90 ntBASIC0.38□□□□□ -2.35
SH3KBP1Q96B97 MIR516A1-201ENST00000385033 90 ntBASIC0.38□□□□□ -2.35
SH3KBP1Q96B97 RNU6-863P-201ENST00000515989 104 ntBASIC0.38□□□□□ -2.35
SH3KBP1Q96B97 Y_RNA.809-201ENST00000516058 95 ntBASIC0.38□□□□□ -2.35
SH3KBP1Q96B97 Y_RNA.712-201ENST00000517011 92 ntBASIC0.38□□□□□ -2.35
SH3KBP1Q96B97 MIR4752-201ENST00000579672 72 ntBASIC0.38□□□□□ -2.35
SH3KBP1Q96B97 RNU6-1313P-201ENST00000362622 102 ntBASIC0.37□□□□□ -2.35
SH3KBP1Q96B97 Y_RNA.261-201ENST00000364631 102 ntBASIC0.37□□□□□ -2.35
SH3KBP1Q96B97 Y_RNA.433-201ENST00000384089 102 ntBASIC0.37□□□□□ -2.35
SH3KBP1Q96B97 RNU6-571P-201ENST00000384128 107 ntBASIC0.37□□□□□ -2.35
SH3KBP1Q96B97 RNA5SP134-201ENST00000516492 96 ntBASIC0.37□□□□□ -2.35
SH3KBP1Q96B97 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.37□□□□□ -2.35
SH3KBP1Q96B97 Y_RNA.342-201ENST00000365352 113 ntBASIC0.36□□□□□ -2.35
SH3KBP1Q96B97 SNORD116-14-201ENST00000383894 92 ntBASIC0.36□□□□□ -2.35
SH3KBP1Q96B97 SNORD116-17-201ENST00000383929 92 ntBASIC0.36□□□□□ -2.35
SH3KBP1Q96B97 SNORD116-15-201ENST00000384445 92 ntBASIC0.36□□□□□ -2.35
SH3KBP1Q96B97 RNU6-959P-201ENST00000384671 107 ntBASIC0.36□□□□□ -2.35
SH3KBP1Q96B97 SNORD116-19-201ENST00000384729 92 ntBASIC0.36□□□□□ -2.35
SH3KBP1Q96B97 RNU2-59P-201ENST00000410482 191 ntBASIC0.36□□□□□ -2.35
SH3KBP1Q96B97 RNU6-90P-201ENST00000606352 106 ntBASIC0.36□□□□□ -2.35
SH3KBP1Q96B97 MIR548G-201ENST00000408442 89 ntBASIC0.35□□□□□ -2.35
SH3KBP1Q96B97 MIR1912-201ENST00000410389 80 ntBASIC0.35□□□□□ -2.35
SH3KBP1Q96B97 AC097635.1-201ENST00000450678 155 ntBASIC0.35□□□□□ -2.35
SH3KBP1Q96B97 RPL39P34-201ENST00000477141 156 ntBASIC0.35□□□□□ -2.35
SH3KBP1Q96B97 RNU6-1006P-201ENST00000516998 103 ntBASIC0.35□□□□□ -2.35
SH3KBP1Q96B97 AC067863.3-201ENST00000624172 122 ntBASIC0.35□□□□□ -2.35
SH3KBP1Q96B97 U6.95-201ENST00000636931 70 ntBASIC0.35□□□□□ -2.35
SH3KBP1Q96B97 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
SH3KBP1Q96B97 RNU6-1327P-201ENST00000365302 105 ntBASIC0.34□□□□□ -2.36
SH3KBP1Q96B97 RNU6-1201P-201ENST00000384227 107 ntBASIC0.34□□□□□ -2.36
SH3KBP1Q96B97 RNU6-524P-201ENST00000384270 107 ntBASIC0.34□□□□□ -2.36
SH3KBP1Q96B97 AC073261.1-201ENST00000429409 121 ntBASIC0.34□□□□□ -2.36
SH3KBP1Q96B97 TMSB4XP3-201ENST00000445144 114 ntBASIC0.34□□□□□ -2.36
SH3KBP1Q96B97 AL442128.1-201ENST00000615151 90 ntBASIC0.34□□□□□ -2.36
SH3KBP1Q96B97 SNORD38.1-201ENST00000363863 68 ntBASIC0.33□□□□□ -2.36
SH3KBP1Q96B97 RNU6-726P-201ENST00000364680 107 ntBASIC0.33□□□□□ -2.36
SH3KBP1Q96B97 Y_RNA.309-201ENST00000365046 111 ntBASIC0.33□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 174.3 ms