Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC097510.1-201ENST00000510945 133 ntBASIC2.29□□□□□ -2.04
HLA-CQ95604 AC036111.3-201ENST00000526389 112 ntBASIC2.29□□□□□ -2.04
HLA-CQ95604 AL512310.8-201ENST00000550183 120 ntBASIC2.29□□□□□ -2.04
HLA-CQ95604 RNU6-154P-201ENST00000384306 106 ntBASIC2.28□□□□□ -2.04
HLA-CQ95604 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HLA-CQ95604 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HLA-CQ95604 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.28□□□□□ -2.04
HLA-CQ95604 SNORD83.1-201ENST00000411362 77 ntBASIC2.28□□□□□ -2.04
HLA-CQ95604 RNA5SP233-201ENST00000459153 113 ntBASIC2.28□□□□□ -2.04
HLA-CQ95604 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.28□□□□□ -2.04
HLA-CQ95604 MIR6766-201ENST00000622641 72 ntBASIC2.28□□□□□ -2.04
HLA-CQ95604 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HLA-CQ95604 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-CQ95604 SNORA17.3-201ENST00000391159 129 ntBASIC2.27□□□□□ -2.05
HLA-CQ95604 U3.27-201ENST00000391237 200 ntBASIC2.27□□□□□ -2.05
HLA-CQ95604 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.27□□□□□ -2.05
HLA-CQ95604 RNA5SP182-201ENST00000516064 82 ntBASIC2.27□□□□□ -2.05
HLA-CQ95604 AC019176.1-201ENST00000518519 225 ntBASIC2.27□□□□□ -2.05
HLA-CQ95604 AC106800.4-201ENST00000614905 153 ntBASIC2.27□□□□□ -2.05
HLA-CQ95604 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HLA-CQ95604 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HLA-CQ95604 RNU6-540P-201ENST00000384622 101 ntBASIC2.26□□□□□ -2.05
HLA-CQ95604 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
HLA-CQ95604 snoU13.21-201ENST00000459368 105 ntBASIC2.26□□□□□ -2.05
HLA-CQ95604 RNU7-156P-201ENST00000517214 74 ntBASIC2.26□□□□□ -2.05
HLA-CQ95604 AL645939.4-201ENST00000604495 135 ntBASIC2.26□□□□□ -2.05
HLA-CQ95604 U6.81-201ENST00000612550 106 ntBASIC2.26□□□□□ -2.05
HLA-CQ95604 ZNF355P-201ENST00000427301 3216 ntBASIC2.26□□□□□ -2.05
HLA-CQ95604 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-CQ95604 SNORA24B-201ENST00000384176 131 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 MIR144-201ENST00000384886 86 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 SNORD30.1-201ENST00000391309 70 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 MIR1265-201ENST00000408444 86 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 RPS26P5-201ENST00000418544 335 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 AC244505.6-201ENST00000452829 130 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 snoU13.18-201ENST00000459483 104 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 TRMT112P2-201ENST00000512910 132 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 MIR4771-2-201ENST00000577758 74 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 MIR4771-1-201ENST00000582617 74 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 AL627230.6-201ENST00000611129 280 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC2.25□□□□□ -2.05
HLA-CQ95604 U6.111-201ENST00000636093 83 ntBASIC2.25□□□□□ -2.05
HLA-CQ95604 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
HLA-CQ95604 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-CQ95604 MIR6073-201ENST00000352083 89 ntBASIC2.24□□□□□ -2.05
HLA-CQ95604 SNORD115-44-201ENST00000365391 82 ntBASIC2.24□□□□□ -2.05
HLA-CQ95604 Y_RNA.386-201ENST00000383913 105 ntBASIC2.24□□□□□ -2.05
HLA-CQ95604 Y_RNA.330-201ENST00000365230 109 ntBASIC2.23□□□□□ -2.05
HLA-CQ95604 Y_RNA.371-201ENST00000365591 113 ntBASIC2.23□□□□□ -2.05
HLA-CQ95604 RNA5SP181-201ENST00000410246 98 ntBASIC2.23□□□□□ -2.05
HLA-CQ95604 RNA5SP82-201ENST00000516707 92 ntBASIC2.23□□□□□ -2.05
HLA-CQ95604 MIR3675-201ENST00000583661 73 ntBASIC2.23□□□□□ -2.05
HLA-CQ95604 AL359821.1-201ENST00000605519 182 ntBASIC2.23□□□□□ -2.05
HLA-CQ95604 MIR664A-201ENST00000626086 82 ntBASIC2.23□□□□□ -2.05
HLA-CQ95604 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-CQ95604 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HLA-CQ95604 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HLA-CQ95604 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-CQ95604 RNU6-800P-201ENST00000384473 103 ntBASIC2.22□□□□□ -2.05
HLA-CQ95604 RNU1-78P-201ENST00000391248 165 ntBASIC2.22□□□□□ -2.05
HLA-CQ95604 RNA5SP402-201ENST00000517148 110 ntBASIC2.22□□□□□ -2.05
HLA-CQ95604 RNU6-1057P-201ENST00000517162 102 ntBASIC2.22□□□□□ -2.05
HLA-CQ95604 MIR4422-201ENST00000581938 83 ntBASIC2.22□□□□□ -2.05
HLA-CQ95604 MIR8053-201ENST00000613344 75 ntBASIC2.22□□□□□ -2.05
HLA-CQ95604 MIR6895-201ENST00000613497 78 ntBASIC2.22□□□□□ -2.05
HLA-CQ95604 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.21□□□□□ -2.05
HLA-CQ95604 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HLA-CQ95604 RNU6-471P-201ENST00000383944 106 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 RNU6-364P-201ENST00000384387 107 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 RNU6-535P-201ENST00000384722 107 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 RNU6-663P-201ENST00000391105 106 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 MIR938-201ENST00000401216 83 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 AL591704.2-201ENST00000421658 181 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-CQ95604 MIR5089-201ENST00000580047 84 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 MIR4676-201ENST00000583078 72 ntBASIC2.21□□□□□ -2.06
HLA-CQ95604 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-CQ95604 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.21□□□□□ -2.06
HLA-CQ95604 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
HLA-CQ95604 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.21□□□□□ -2.06
HLA-CQ95604 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.2□□□□□ -2.06
HLA-CQ95604 MIR21-201ENST00000362134 72 ntBASIC2.2□□□□□ -2.06
HLA-CQ95604 MIR451A-201ENST00000385059 72 ntBASIC2.2□□□□□ -2.06
HLA-CQ95604 SNORA48.3-201ENST00000391081 134 ntBASIC2.2□□□□□ -2.06
HLA-CQ95604 SNORA75.2-201ENST00000391138 150 ntBASIC2.2□□□□□ -2.06
HLA-CQ95604 SNORA75.3-201ENST00000391231 150 ntBASIC2.2□□□□□ -2.06
HLA-CQ95604 AC048334.1-201ENST00000477975 159 ntBASIC2.2□□□□□ -2.06
HLA-CQ95604 RNU6-752P-201ENST00000516376 102 ntBASIC2.2□□□□□ -2.06
HLA-CQ95604 AC008608.1-201ENST00000603910 127 ntBASIC2.2□□□□□ -2.06
HLA-CQ95604 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
HLA-CQ95604 MIR216B-201ENST00000390186 82 ntBASIC2.19□□□□□ -2.06
HLA-CQ95604 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HLA-CQ95604 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HLA-CQ95604 RN7SKP88-201ENST00000516847 250 ntBASIC2.19□□□□□ -2.06
HLA-CQ95604 IGLVVI-22-1-201ENST00000521183 211 ntBASIC2.19□□□□□ -2.06
HLA-CQ95604 MIR3140-201ENST00000583685 90 ntBASIC2.19□□□□□ -2.06
HLA-CQ95604 7SK.8-201ENST00000612110 250 ntBASIC2.19□□□□□ -2.06
HLA-CQ95604 7SK.11-201ENST00000615477 250 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 231.7 ms