Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 IGHVII-40-1-201ENST00000517316 58 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 MTRNR2L2-201ENST00000604882 87 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.773-201ENST00000607168 90 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 AP001362.1-201ENST00000625165 124 ntBASIC-0.52□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.328-201ENST00000365208 113 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.352-201ENST00000365439 102 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.460-201ENST00000384255 102 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 RNU6-472P-201ENST00000384299 107 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 RNU6-476P-201ENST00000384726 107 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 MT-TW-201ENST00000387382 68 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.793-201ENST00000411222 111 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 AL353813.1-201ENST00000440700 253 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 RNU7-55P-201ENST00000459426 62 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 RNU7-2P-201ENST00000516096 62 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 MIR4460-201ENST00000577862 86 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 MIR4308-201ENST00000580634 81 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 AC108081.1-201ENST00000604358 221 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 MIR6851-201ENST00000617060 67 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 uc_338.10-201ENST00000621872 182 ntBASIC-0.53□□□□□ -2.49
LMX1AQ8TE12 Y_RNA.207-201ENST00000364142 106 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.247-201ENST00000364500 92 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 SNORD114-29-201ENST00000364819 70 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 SNORD115-35-201ENST00000365122 82 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 RNY4P28-201ENST00000365281 93 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 RNU6-735P-201ENST00000410612 107 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 AL500527.2-201ENST00000454105 95 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.797-201ENST00000515977 94 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 TRDV1-202ENST00000621643 102 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 AC093726.3-201ENST00000637588 150 ntBASIC-0.54□□□□□ -2.5
LMX1AQ8TE12 RNU6-957P-201ENST00000363652 99 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 RNU6-1163P-201ENST00000364516 107 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 RNU6-275P-201ENST00000364910 107 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.483-201ENST00000384380 101 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 RNU6-900P-201ENST00000384498 102 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 RNU6-768P-201ENST00000384683 107 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 RNU6-493P-201ENST00000391321 108 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 RNU7-164P-201ENST00000459221 62 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 MTND1P19-201ENST00000511780 315 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 AC138907.4-201ENST00000570107 226 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 MIR3149-201ENST00000584629 83 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 AC021443.1-201ENST00000604478 211 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 MIR8062-201ENST00000621515 85 ntBASIC-0.55□□□□□ -2.5
LMX1AQ8TE12 SNORD36A-201ENST00000362874 73 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 SNORA33.2-201ENST00000365413 134 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 RNU6-54P-201ENST00000365563 107 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 RNU6-47P-201ENST00000383866 107 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.447-201ENST00000384184 113 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 RNU6-905P-201ENST00000384434 107 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 MIR548E-201ENST00000408287 88 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 RNU6-1006P-201ENST00000516998 103 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 AP002392.1-201ENST00000537692 208 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 MIR1255B1-201ENST00000636325 63 ntBASIC-0.56□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.75-201ENST00000362927 97 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.202-201ENST00000364083 110 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.298-201ENST00000364960 107 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.308-201ENST00000365043 101 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.342-201ENST00000365352 113 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.360-201ENST00000365512 102 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.785-201ENST00000384290 109 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 SNORD58.1-201ENST00000391313 66 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 SNORD42B-201ENST00000458893 67 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.686-201ENST00000516548 134 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 RNU6-762P-201ENST00000517107 102 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 IGKV1-22-201ENST00000524313 326 ntBASIC-0.57□□□□□ -2.5
LMX1AQ8TE12 SNORD115-25-201ENST00000362619 82 ntBASIC-0.58□□□□□ -2.5
LMX1AQ8TE12 RNU6-309P-201ENST00000364573 106 ntBASIC-0.58□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.497-201ENST00000384447 98 ntBASIC-0.58□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.535-201ENST00000384612 99 ntBASIC-0.58□□□□□ -2.5
LMX1AQ8TE12 RNU6-713P-201ENST00000384761 107 ntBASIC-0.58□□□□□ -2.5
LMX1AQ8TE12 MTCYBP6-201ENST00000441810 138 ntBASIC-0.58□□□□□ -2.5
LMX1AQ8TE12 RNY4P20-201ENST00000516678 93 ntBASIC-0.58□□□□□ -2.5
LMX1AQ8TE12 U6.106-201ENST00000636360 105 ntBASIC-0.58□□□□□ -2.5
LMX1AQ8TE12 RNU6-502P-201ENST00000362419 108 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 SNORD114-25-201ENST00000363742 72 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.182-201ENST00000363880 111 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.277-201ENST00000364754 102 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 MIR1302-6-201ENST00000408466 90 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 SNORD22.1-201ENST00000516331 125 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 Evf-2_5p.1-201ENST00000614213 142 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 MIR548O2-201ENST00000616090 70 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 U6.104-201ENST00000637979 90 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 MTND5P18-201ENST00000445624 1801 ntBASIC-0.59□□□□□ -2.5
LMX1AQ8TE12 MIR20A-201ENST00000362279 71 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 Y_RNA.377-201ENST00000365644 108 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 MIR196A1-201ENST00000388006 70 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 SNORD77B-201ENST00000391112 67 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 RNU4-63P-201ENST00000411313 118 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 MTATP6P23-201ENST00000440153 476 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 MTATP6P21-201ENST00000440681 189 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 AC244090.1-201ENST00000441884 93 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 SNORD127-201ENST00000458892 86 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 snoU13.11-201ENST00000459219 104 ntBASIC-0.6□□□□□ -2.51
LMX1AQ8TE12 RNU6-521P-201ENST00000516663 105 ntBASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms