Protein–RNA interactions for Protein: Q8NEM2

SHCBP1, SHC SH2 domain-binding protein 1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1Q8NEM2 SNORA72.6-201ENST00000384520 129 ntBASIC1.39□□□□□ -2.19
SHCBP1Q8NEM2 MIR520E-201ENST00000384867 87 ntBASIC1.39□□□□□ -2.19
SHCBP1Q8NEM2 MIR1257-201ENST00000408490 117 ntBASIC1.39□□□□□ -2.19
SHCBP1Q8NEM2 AL591704.2-201ENST00000421658 181 ntBASIC1.39□□□□□ -2.19
SHCBP1Q8NEM2 RNU7-21P-201ENST00000459430 62 ntBASIC1.39□□□□□ -2.19
SHCBP1Q8NEM2 AC106800.4-201ENST00000614905 153 ntBASIC1.39□□□□□ -2.19
SHCBP1Q8NEM2 MIR8066-201ENST00000617280 78 ntBASIC1.39□□□□□ -2.19
SHCBP1Q8NEM2 Y_RNA.57-201ENST00000362806 113 ntBASIC1.38□□□□□ -2.19
SHCBP1Q8NEM2 RNU4-58P-201ENST00000363192 141 ntBASIC1.38□□□□□ -2.19
SHCBP1Q8NEM2 SNORD114-26-201ENST00000363543 72 ntBASIC1.38□□□□□ -2.19
SHCBP1Q8NEM2 RNU6-934P-201ENST00000365154 107 ntBASIC1.38□□□□□ -2.19
SHCBP1Q8NEM2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.38□□□□□ -2.19
SHCBP1Q8NEM2 AC068338.1-201ENST00000565567 176 ntBASIC1.38□□□□□ -2.19
SHCBP1Q8NEM2 MIR6515-201ENST00000619843 57 ntBASIC1.38□□□□□ -2.19
SHCBP1Q8NEM2 MIR1245B-201ENST00000636115 69 ntBASIC1.38□□□□□ -2.19
SHCBP1Q8NEM2 SNORA80D-201ENST00000384488 135 ntBASIC1.37□□□□□ -2.19
SHCBP1Q8NEM2 SNORD111-201ENST00000408139 94 ntBASIC1.37□□□□□ -2.19
SHCBP1Q8NEM2 SNORD79.1-201ENST00000516069 84 ntBASIC1.37□□□□□ -2.19
SHCBP1Q8NEM2 RNU7-40P-201ENST00000516397 64 ntBASIC1.37□□□□□ -2.19
SHCBP1Q8NEM2 MIR4771-2-201ENST00000577758 74 ntBASIC1.37□□□□□ -2.19
SHCBP1Q8NEM2 MIR4771-1-201ENST00000582617 74 ntBASIC1.37□□□□□ -2.19
SHCBP1Q8NEM2 AC022709.1-201ENST00000615967 87 ntBASIC1.37□□□□□ -2.19
SHCBP1Q8NEM2 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
SHCBP1Q8NEM2 Y_RNA.13-201ENST00000362403 112 ntBASIC1.36□□□□□ -2.19
SHCBP1Q8NEM2 RNU6-497P-201ENST00000365316 104 ntBASIC1.36□□□□□ -2.19
SHCBP1Q8NEM2 Y_RNA.540-201ENST00000384638 111 ntBASIC1.36□□□□□ -2.19
SHCBP1Q8NEM2 RPS29P1-201ENST00000465274 159 ntBASIC1.36□□□□□ -2.19
SHCBP1Q8NEM2 Y_RNA.36-201ENST00000362602 112 ntBASIC1.35□□□□□ -2.19
SHCBP1Q8NEM2 AC013244.2-201ENST00000603396 103 ntBASIC1.35□□□□□ -2.19
SHCBP1Q8NEM2 MIR6082-201ENST00000613604 109 ntBASIC1.35□□□□□ -2.19
SHCBP1Q8NEM2 RNU6-369P-201ENST00000362515 102 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 RNU6-633P-201ENST00000362612 103 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 RNU6-509P-201ENST00000363519 107 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 RNU6-979P-201ENST00000383896 107 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 MIR516A2-201ENST00000384888 90 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 MIR222-201ENST00000384992 110 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 MIR516A1-201ENST00000385033 90 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 MIR125B2-201ENST00000385128 89 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 RPS26P5-201ENST00000418544 335 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 AL161932.1-201ENST00000437408 146 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 RNU7-90P-201ENST00000459216 62 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 RNU6-1194P-201ENST00000516208 104 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 MIR5588-201ENST00000581890 63 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 MIR6767-201ENST00000637302 66 ntBASIC1.34□□□□□ -2.19
SHCBP1Q8NEM2 Y_RNA.42-201ENST00000362660 108 ntBASIC1.33□□□□□ -2.2
SHCBP1Q8NEM2 SNORD115-27-201ENST00000364430 82 ntBASIC1.33□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-939P-201ENST00000384634 107 ntBASIC1.33□□□□□ -2.2
SHCBP1Q8NEM2 SNORD100-201ENST00000408573 76 ntBASIC1.33□□□□□ -2.2
SHCBP1Q8NEM2 RNU7-106P-201ENST00000459514 67 ntBASIC1.33□□□□□ -2.2
SHCBP1Q8NEM2 MIR4295-201ENST00000585286 85 ntBASIC1.33□□□□□ -2.2
SHCBP1Q8NEM2 SNORD36A-201ENST00000362874 73 ntBASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-1276P-201ENST00000365372 104 ntBASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-519P-201ENST00000410590 108 ntBASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 AC087343.1-201ENST00000477341 475 ntBASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-1223P-201ENST00000517124 104 ntBASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 SNORA70.22-201ENST00000517160 124 ntBASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 MIR4676-201ENST00000583078 72 ntBASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 MIR548BB-201ENST00000626714 66 ntBASIC1.32□□□□□ -2.2
SHCBP1Q8NEM2 MIR101-2-201ENST00000362195 79 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 RNA5SP327-201ENST00000362494 101 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 Y_RNA.219-201ENST00000364232 113 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-242P-201ENST00000384359 107 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-1254P-201ENST00000391266 104 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 Y_RNA.611-201ENST00000410682 108 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 SNORD63B-201ENST00000411005 70 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 RNU7-85P-201ENST00000458851 63 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 SNORD4B-201ENST00000459083 72 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 Y_RNA.648-201ENST00000459455 110 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 TRAJ51-201ENST00000504127 63 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-765P-201ENST00000516916 99 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 RNU7-156P-201ENST00000517214 74 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 AP003327.1-201ENST00000529684 127 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 MIR6788-201ENST00000618842 66 ntBASIC1.31□□□□□ -2.2
SHCBP1Q8NEM2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-994P-201ENST00000410507 111 ntBASIC1.3□□□□□ -2.2
SHCBP1Q8NEM2 MIR151B-201ENST00000584249 96 ntBASIC1.3□□□□□ -2.2
SHCBP1Q8NEM2 AC006160.2-201ENST00000637708 154 ntBASIC1.3□□□□□ -2.2
SHCBP1Q8NEM2 Y_RNA.536-201ENST00000384621 113 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 MIR598-201ENST00000384868 97 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 SNORD78.1-201ENST00000390866 65 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-1275P-201ENST00000391087 107 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 MIR548J-201ENST00000408833 112 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 snoU13.11-201ENST00000459219 104 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 RNU7-171P-201ENST00000459581 62 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 SNORD92-201ENST00000585078 85 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 MIR6779-201ENST00000617283 64 ntBASIC1.29□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-228P-201ENST00000362700 106 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 Y_RNA.56-201ENST00000362798 112 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-787P-201ENST00000384032 107 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 MIR635-201ENST00000384830 98 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 SNORD12-201ENST00000391002 90 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 RNU6-243P-201ENST00000391140 107 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 MIR938-201ENST00000401216 83 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 MIR548H5-201ENST00000580314 60 ntBASIC1.28□□□□□ -2.2
SHCBP1Q8NEM2 MIR4804-201ENST00000581683 73 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms