Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MIR101-2-201ENST00000362195 79 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 RNU6-509P-201ENST00000363519 107 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 Y_RNA.536-201ENST00000384621 113 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 MIR1827-201ENST00000408549 66 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 AP1B1P2-201ENST00000416196 106 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 RNU7-85P-201ENST00000458851 63 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 RNU7-102P-201ENST00000458948 62 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 SNORD4B-201ENST00000459083 72 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 Y_RNA.648-201ENST00000459455 110 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.18□□□□□ -2.22
CPEB3Q8NE35 AC027335.2-201ENST00000624030 375 ntBASIC1.18□□□□□ -2.22
CPEB3Q8NE35 Y_RNA.4-201ENST00000362333 112 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 Y_RNA.164-201ENST00000363709 102 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 SNORD115-27-201ENST00000364430 82 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 RNU6-979P-201ENST00000383896 107 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 RNU6-364P-201ENST00000384387 107 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 MIR635-201ENST00000384830 98 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 MIR519A1-201ENST00000385257 85 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 MIR100-201ENST00000385259 80 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CPEB3Q8NE35 RNU6-519P-201ENST00000410590 108 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 RNU7-56P-201ENST00000458744 62 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 Y_RNA.697-201ENST00000516776 113 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 RNU6-448P-201ENST00000517052 107 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 AC019288.1-201ENST00000557918 224 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 MIR548H5-201ENST00000580314 60 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 MIR5588-201ENST00000581890 63 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 AC008608.1-201ENST00000603910 127 ntBASIC1.17□□□□□ -2.22
CPEB3Q8NE35 MIR1-1-201ENST00000362147 71 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 AC092628.1-201ENST00000436250 252 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 snoU13.11-201ENST00000459219 104 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 Y_RNA.676-201ENST00000516393 96 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 RNU6-977P-201ENST00000516411 103 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
CPEB3Q8NE35 RNU7-10P-201ENST00000607194 63 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 AL157834.3-201ENST00000615543 103 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 MIR548BB-201ENST00000626714 66 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 MIR1245B-201ENST00000636115 69 ntBASIC1.16□□□□□ -2.22
CPEB3Q8NE35 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
CPEB3Q8NE35 MIR618-201ENST00000385287 98 ntBASIC1.15□□□□□ -2.23
CPEB3Q8NE35 RNU6-243P-201ENST00000391140 107 ntBASIC1.15□□□□□ -2.23
CPEB3Q8NE35 RNU7-195P-201ENST00000458793 62 ntBASIC1.15□□□□□ -2.23
CPEB3Q8NE35 RNU1-123P-201ENST00000458950 160 ntBASIC1.15□□□□□ -2.23
CPEB3Q8NE35 MIR337-201ENST00000362281 93 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 RNU6-1276P-201ENST00000365372 104 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 RNU6-291P-201ENST00000384720 107 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 MIR19B1-201ENST00000384829 87 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 MIR758-201ENST00000390227 88 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 Y_RNA.611-201ENST00000410682 108 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 AC004223.1-201ENST00000479840 271 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 AP003327.1-201ENST00000529684 127 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 AC068338.1-201ENST00000565567 176 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 MIR6078-201ENST00000611069 100 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 AL353770.2-201ENST00000620024 78 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 AC006160.2-201ENST00000637708 154 ntBASIC1.14□□□□□ -2.23
CPEB3Q8NE35 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
CPEB3Q8NE35 Y_RNA.283-201ENST00000364798 112 ntBASIC1.13□□□□□ -2.23
CPEB3Q8NE35 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
CPEB3Q8NE35 MIR520F-201ENST00000384824 87 ntBASIC1.13□□□□□ -2.23
CPEB3Q8NE35 RNU1-119P-201ENST00000391122 165 ntBASIC1.13□□□□□ -2.23
CPEB3Q8NE35 AC067940.1-201ENST00000458411 300 ntBASIC1.13□□□□□ -2.23
CPEB3Q8NE35 RNU6-75P-201ENST00000515944 104 ntBASIC1.13□□□□□ -2.23
CPEB3Q8NE35 RMST_2.1-201ENST00000617263 136 ntBASIC1.13□□□□□ -2.23
CPEB3Q8NE35 RNU6-1260P-201ENST00000362944 107 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 Y_RNA.219-201ENST00000364232 113 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 RNA5SP245-201ENST00000364239 121 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 RNU6-242P-201ENST00000384359 107 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 RNU6-535P-201ENST00000384722 107 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 MIR519C-201ENST00000385053 87 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 RNU7-171P-201ENST00000459581 62 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.12□□□□□ -2.23
CPEB3Q8NE35 TRMT112P2-201ENST00000512910 132 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 Y_RNA.809-201ENST00000516058 95 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 AL359821.1-201ENST00000605519 182 ntBASIC1.12□□□□□ -2.23
CPEB3Q8NE35 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
CPEB3Q8NE35 RNU6-957P-201ENST00000363652 99 ntBASIC1.11□□□□□ -2.23
CPEB3Q8NE35 RNU6-787P-201ENST00000384032 107 ntBASIC1.11□□□□□ -2.23
CPEB3Q8NE35 SNORA40.6-201ENST00000391153 128 ntBASIC1.11□□□□□ -2.23
CPEB3Q8NE35 AC097635.1-201ENST00000450678 155 ntBASIC1.11□□□□□ -2.23
CPEB3Q8NE35 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.11□□□□□ -2.23
CPEB3Q8NE35 MIR3660-201ENST00000584845 100 ntBASIC1.11□□□□□ -2.23
CPEB3Q8NE35 Y_RNA.426-201ENST00000384068 113 ntBASIC1.1□□□□□ -2.23
CPEB3Q8NE35 RNU6-524P-201ENST00000384270 107 ntBASIC1.1□□□□□ -2.23
CPEB3Q8NE35 RNU6-466P-201ENST00000391224 103 ntBASIC1.1□□□□□ -2.23
CPEB3Q8NE35 AC138907.6-201ENST00000568401 126 ntBASIC1.1□□□□□ -2.23
CPEB3Q8NE35 AC138869.1-201ENST00000568623 124 ntBASIC1.1□□□□□ -2.23
CPEB3Q8NE35 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.09□□□□□ -2.23
CPEB3Q8NE35 RNU4-32P-201ENST00000363404 141 ntBASIC1.09□□□□□ -2.23
CPEB3Q8NE35 Y_RNA.327-201ENST00000365201 102 ntBASIC1.09□□□□□ -2.23
CPEB3Q8NE35 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CPEB3Q8NE35 RNU6-321P-201ENST00000410912 106 ntBASIC1.09□□□□□ -2.23
CPEB3Q8NE35 SNORD124-201ENST00000459577 104 ntBASIC1.09□□□□□ -2.23
CPEB3Q8NE35 RNU6-1110P-201ENST00000516462 101 ntBASIC1.09□□□□□ -2.23
CPEB3Q8NE35 MIR4536-1-201ENST00000583537 88 ntBASIC1.09□□□□□ -2.23
CPEB3Q8NE35 VPS35-212ENST00000640313 141 ntTSL 5 BASIC1.09□□□□□ -2.23
CPEB3Q8NE35 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.08□□□□□ -2.24
CPEB3Q8NE35 Y_RNA.32-201ENST00000362589 110 ntBASIC1.08□□□□□ -2.24
CPEB3Q8NE35 MIR599-201ENST00000385069 95 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 165.2 ms