Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MIR6767-201ENST00000637302 66 ntBASIC1.28□□□□□ -2.2
SLC44A3Q8N4M1 Y_RNA.73-201ENST00000362910 113 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-1125P-201ENST00000363601 107 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 Y_RNA.330-201ENST00000365230 109 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-480P-201ENST00000384332 107 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 SNORD93-201ENST00000408813 74 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 MIR548J-201ENST00000408833 112 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-531P-201ENST00000516694 104 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 MIR8066-201ENST00000617280 78 ntBASIC1.27□□□□□ -2.21
SLC44A3Q8N4M1 MIR222-201ENST00000384992 110 ntBASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-910P-201ENST00000390844 107 ntBASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 AL591704.2-201ENST00000421658 181 ntBASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 AC015818.7-201ENST00000428754 109 ntBASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 AC087499.7-201ENST00000441958 109 ntBASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-1194P-201ENST00000516208 104 ntBASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 AC023934.1-201ENST00000574529 2389 ntBASIC1.26□□□□□ -2.21
SLC44A3Q8N4M1 Y_RNA.42-201ENST00000362660 108 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 Y_RNA.57-201ENST00000362806 113 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 RNU4-58P-201ENST00000363192 141 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-979P-201ENST00000383896 107 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 SNORA80D-201ENST00000384488 135 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 MIR150-201ENST00000385048 84 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 SNORD111-201ENST00000408139 94 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 MIR1257-201ENST00000408490 117 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 Y_RNA.609-201ENST00000410669 89 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 AC022137.1-201ENST00000483735 151 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 RNU7-40P-201ENST00000516397 64 ntBASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.25□□□□□ -2.21
SLC44A3Q8N4M1 RNY1P1-201ENST00000364372 112 ntBASIC1.24□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-573P-201ENST00000383938 106 ntBASIC1.24□□□□□ -2.21
SLC44A3Q8N4M1 RNY1P4-201ENST00000384595 115 ntBASIC1.24□□□□□ -2.21
SLC44A3Q8N4M1 MIR758-201ENST00000390227 88 ntBASIC1.24□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-765P-201ENST00000516916 99 ntBASIC1.24□□□□□ -2.21
SLC44A3Q8N4M1 AC023827.1-201ENST00000569247 97 ntBASIC1.24□□□□□ -2.21
SLC44A3Q8N4M1 MIR5588-201ENST00000581890 63 ntBASIC1.24□□□□□ -2.21
SLC44A3Q8N4M1 MIR6082-201ENST00000613604 109 ntBASIC1.24□□□□□ -2.21
SLC44A3Q8N4M1 Y_RNA.13-201ENST00000362403 112 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-633P-201ENST00000362612 103 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 SNORD115-27-201ENST00000364430 82 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-934P-201ENST00000365154 107 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 MIR125B2-201ENST00000385128 89 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 AL161932.1-201ENST00000437408 146 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 AC087343.1-201ENST00000477341 475 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 MIR4771-2-201ENST00000577758 74 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 MIR4771-1-201ENST00000582617 74 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 MIR1245B-201ENST00000636115 69 ntBASIC1.23□□□□□ -2.21
SLC44A3Q8N4M1 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 MIR26B-201ENST00000362251 77 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 SNORD36A-201ENST00000362874 73 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-403P-201ENST00000363163 104 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 RNU6-509P-201ENST00000363519 107 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 SNORA72.6-201ENST00000384520 129 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 SNORD12-201ENST00000391002 90 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 RPS26P5-201ENST00000418544 335 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 RNU7-85P-201ENST00000458851 63 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 RNU7-90P-201ENST00000459216 62 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 IGLL4P-201ENST00000614590 133 ntBASIC1.22□□□□□ -2.21
SLC44A3Q8N4M1 MIR516A2-201ENST00000384888 90 ntBASIC1.21□□□□□ -2.22
SLC44A3Q8N4M1 MIR516A1-201ENST00000385033 90 ntBASIC1.21□□□□□ -2.22
SLC44A3Q8N4M1 RNU6-1275P-201ENST00000391087 107 ntBASIC1.21□□□□□ -2.22
SLC44A3Q8N4M1 SNORD100-201ENST00000408573 76 ntBASIC1.21□□□□□ -2.22
SLC44A3Q8N4M1 Y_RNA.648-201ENST00000459455 110 ntBASIC1.21□□□□□ -2.22
SLC44A3Q8N4M1 MIR4676-201ENST00000583078 72 ntBASIC1.21□□□□□ -2.22
SLC44A3Q8N4M1 SNORD92-201ENST00000585078 85 ntBASIC1.21□□□□□ -2.22
SLC44A3Q8N4M1 AC013244.2-201ENST00000603396 103 ntBASIC1.21□□□□□ -2.22
SLC44A3Q8N4M1 Y_RNA.219-201ENST00000364232 113 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 SNORA25.8-201ENST00000364831 128 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 RNU6-787P-201ENST00000384032 107 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 MIR519A1-201ENST00000385257 85 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 SNORD63B-201ENST00000411005 70 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 SNORD4B-201ENST00000459083 72 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 RNU7-106P-201ENST00000459514 67 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 RNU7-171P-201ENST00000459581 62 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 CYP19A1-220ENST00000613097 123 ntTSL 5 BASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 MIR548BB-201ENST00000626714 66 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 AC006160.2-201ENST00000637708 154 ntBASIC1.2□□□□□ -2.22
SLC44A3Q8N4M1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
SLC44A3Q8N4M1 TRAJ51-201ENST00000504127 63 ntBASIC1.19□□□□□ -2.22
SLC44A3Q8N4M1 SNORA70.22-201ENST00000517160 124 ntBASIC1.19□□□□□ -2.22
SLC44A3Q8N4M1 AP003327.1-201ENST00000529684 127 ntBASIC1.19□□□□□ -2.22
SLC44A3Q8N4M1 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
SLC44A3Q8N4M1 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
SLC44A3Q8N4M1 RNU6-1276P-201ENST00000365372 104 ntBASIC1.18□□□□□ -2.22
SLC44A3Q8N4M1 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
SLC44A3Q8N4M1 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
SLC44A3Q8N4M1 RNU6-1254P-201ENST00000391266 104 ntBASIC1.18□□□□□ -2.22
SLC44A3Q8N4M1 snoU13.11-201ENST00000459219 104 ntBASIC1.18□□□□□ -2.22
SLC44A3Q8N4M1 RNA5SP327-201ENST00000362494 101 ntBASIC1.17□□□□□ -2.22
SLC44A3Q8N4M1 RNU6-228P-201ENST00000362700 106 ntBASIC1.17□□□□□ -2.22
SLC44A3Q8N4M1 Y_RNA.56-201ENST00000362798 112 ntBASIC1.17□□□□□ -2.22
SLC44A3Q8N4M1 Y_RNA.536-201ENST00000384621 113 ntBASIC1.17□□□□□ -2.22
SLC44A3Q8N4M1 RNU6-939P-201ENST00000384634 107 ntBASIC1.17□□□□□ -2.22
SLC44A3Q8N4M1 RNU6-519P-201ENST00000410590 108 ntBASIC1.17□□□□□ -2.22
SLC44A3Q8N4M1 AC002429.1-201ENST00000437672 148 ntBASIC1.17□□□□□ -2.22
SLC44A3Q8N4M1 RNU6-75P-201ENST00000515944 104 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 229.2 ms