Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC092794.2-201ENST00000620933 563 ntBASIC-3.77□□□□□ -3.01
VPS8Q8N3P4 Y_RNA.201-201ENST00000364052 96 ntBASIC-3.78□□□□□ -3.01
VPS8Q8N3P4 RNU6-1254P-201ENST00000391266 104 ntBASIC-3.78□□□□□ -3.01
VPS8Q8N3P4 RNU6-261P-201ENST00000459506 102 ntBASIC-3.78□□□□□ -3.01
VPS8Q8N3P4 MTND2P31-201ENST00000512602 616 ntBASIC-3.78□□□□□ -3.01
VPS8Q8N3P4 RNU6-89P-201ENST00000606519 100 ntBASIC-3.78□□□□□ -3.01
VPS8Q8N3P4 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC-3.78□□□□□ -3.01
VPS8Q8N3P4 Y_RNA.77-201ENST00000362962 107 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 SNORA33.1-201ENST00000364957 130 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 Y_RNA.542-201ENST00000384641 111 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 MIR206-201ENST00000384872 86 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 MIR514A2-201ENST00000385131 88 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 MIR514A3-201ENST00000385132 88 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 RBMX2P4-201ENST00000441256 376 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 SCARNA24.2-201ENST00000516968 130 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 AL157392.4-201ENST00000609756 345 ntBASIC-3.78□□□□□ -3.02
VPS8Q8N3P4 SNORD114-13-201ENST00000364377 74 ntBASIC-3.79□□□□□ -3.02
VPS8Q8N3P4 RNU6-828P-201ENST00000364876 107 ntBASIC-3.79□□□□□ -3.02
VPS8Q8N3P4 Y_RNA.349-201ENST00000365406 102 ntBASIC-3.79□□□□□ -3.02
VPS8Q8N3P4 Y_RNA.570-201ENST00000384750 101 ntBASIC-3.79□□□□□ -3.02
VPS8Q8N3P4 SEPT14P8-201ENST00000508026 178 ntBASIC-3.79□□□□□ -3.02
VPS8Q8N3P4 MIR4659A-201ENST00000580269 81 ntBASIC-3.79□□□□□ -3.02
VPS8Q8N3P4 SNORD81.1-201ENST00000363064 77 ntBASIC-3.8□□□□□ -3.02
VPS8Q8N3P4 SNORD27-201ENST00000363981 72 ntBASIC-3.8□□□□□ -3.02
VPS8Q8N3P4 SNORD113-3-201ENST00000364830 72 ntBASIC-3.81□□□□□ -3.02
VPS8Q8N3P4 MRPS36P3-201ENST00000519284 130 ntBASIC-3.81□□□□□ -3.02
VPS8Q8N3P4 RNU6-682P-201ENST00000363843 106 ntBASIC-3.82□□□□□ -3.02
VPS8Q8N3P4 RNU6-248P-201ENST00000410720 107 ntBASIC-3.82□□□□□ -3.02
VPS8Q8N3P4 RNU2-55P-201ENST00000411146 174 ntBASIC-3.82□□□□□ -3.02
VPS8Q8N3P4 MIR548AG1-201ENST00000579932 66 ntBASIC-3.82□□□□□ -3.02
VPS8Q8N3P4 RNU6-906P-201ENST00000384700 70 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 RNU2-72P-201ENST00000411175 163 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 SNORD5.1-201ENST00000458800 75 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 MIR3942-201ENST00000585264 109 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 MIR1244-1-201ENST00000612829 85 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 MIR1244-3-201ENST00000635744 85 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 MIR1244-2-201ENST00000636449 85 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 MIR1244-4-202ENST00000636813 85 ntBASIC-3.83□□□□□ -3.02
VPS8Q8N3P4 Y_RNA.629-201ENST00000411368 105 ntBASIC-3.84□□□□□ -3.02
VPS8Q8N3P4 Y_RNA.677-201ENST00000516401 85 ntBASIC-3.84□□□□□ -3.02
VPS8Q8N3P4 RNA5SP153-201ENST00000516498 76 ntBASIC-3.84□□□□□ -3.02
VPS8Q8N3P4 RNU6-570P-201ENST00000517051 105 ntBASIC-3.84□□□□□ -3.02
VPS8Q8N3P4 PISRT1.1-201ENST00000616930 107 ntBASIC-3.84□□□□□ -3.02
VPS8Q8N3P4 AP000720.1-201ENST00000625091 483 ntBASIC-3.84□□□□□ -3.02
VPS8Q8N3P4 RNU6-478P-201ENST00000363904 110 ntBASIC-3.85□□□□□ -3.03
VPS8Q8N3P4 SNORA69.1-201ENST00000390904 137 ntBASIC-3.85□□□□□ -3.03
VPS8Q8N3P4 RNU6-519P-201ENST00000410590 108 ntBASIC-3.85□□□□□ -3.03
VPS8Q8N3P4 AP003461.1-201ENST00000528866 78 ntBASIC-3.85□□□□□ -3.03
VPS8Q8N3P4 AL731768.1-201ENST00000603124 139 ntBASIC-3.85□□□□□ -3.03
VPS8Q8N3P4 SNORD101-201ENST00000384027 73 ntBASIC-3.86□□□□□ -3.03
VPS8Q8N3P4 Y_RNA.531-201ENST00000384589 121 ntBASIC-3.86□□□□□ -3.03
VPS8Q8N3P4 AL353193.1-201ENST00000421444 268 ntBASIC-3.86□□□□□ -3.03
VPS8Q8N3P4 RNU6-971P-201ENST00000516920 106 ntBASIC-3.86□□□□□ -3.03
VPS8Q8N3P4 MIR4696-201ENST00000581431 70 ntBASIC-3.86□□□□□ -3.03
VPS8Q8N3P4 AC087741.2-201ENST00000619415 172 ntBASIC-3.86□□□□□ -3.03
VPS8Q8N3P4 Y_RNA.622-201ENST00000411091 108 ntBASIC-3.87□□□□□ -3.03
VPS8Q8N3P4 RNY1P6-201ENST00000384193 109 ntBASIC-3.87□□□□□ -3.03
VPS8Q8N3P4 AL021368.1-201ENST00000607490 540 ntBASIC-3.87□□□□□ -3.03
VPS8Q8N3P4 MIR6128-201ENST00000615528 109 ntBASIC-3.87□□□□□ -3.03
VPS8Q8N3P4 RNU6-664P-201ENST00000362381 107 ntBASIC-3.88□□□□□ -3.03
VPS8Q8N3P4 Y_RNA.296-201ENST00000364930 108 ntBASIC-3.88□□□□□ -3.03
VPS8Q8N3P4 MIR451A-201ENST00000385059 72 ntBASIC-3.88□□□□□ -3.03
VPS8Q8N3P4 RNU6-1214P-201ENST00000363650 109 ntBASIC-3.89□□□□□ -3.03
VPS8Q8N3P4 RNU6-957P-201ENST00000363652 99 ntBASIC-3.89□□□□□ -3.03
VPS8Q8N3P4 Y_RNA.530-201ENST00000384587 101 ntBASIC-3.89□□□□□ -3.03
VPS8Q8N3P4 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC-3.89□□□□□ -3.03
VPS8Q8N3P4 RNU6-935P-201ENST00000410371 100 ntBASIC-3.89□□□□□ -3.03
VPS8Q8N3P4 MTCO2P19-201ENST00000427513 598 ntBASIC-3.89□□□□□ -3.03
VPS8Q8N3P4 MTND3P12-201ENST00000559068 328 ntBASIC-3.89□□□□□ -3.03
VPS8Q8N3P4 AC009779.6-201ENST00000603972 165 ntBASIC-3.89□□□□□ -3.03
VPS8Q8N3P4 SNORD113-6-201ENST00000363345 75 ntBASIC-3.9□□□□□ -3.03
VPS8Q8N3P4 SNORA15B-2-201ENST00000384058 135 ntBASIC-3.9□□□□□ -3.03
VPS8Q8N3P4 RNU6-1103P-201ENST00000384150 107 ntBASIC-3.9□□□□□ -3.03
VPS8Q8N3P4 SNORA15B-1-201ENST00000384334 135 ntBASIC-3.9□□□□□ -3.03
VPS8Q8N3P4 RNU6-518P-201ENST00000516056 96 ntBASIC-3.9□□□□□ -3.03
VPS8Q8N3P4 MTCO2P4-201ENST00000517968 247 ntBASIC-3.9□□□□□ -3.03
VPS8Q8N3P4 RNU6-472P-201ENST00000384299 107 ntBASIC-3.91□□□□□ -3.04
VPS8Q8N3P4 U3.27-201ENST00000391237 200 ntBASIC-3.91□□□□□ -3.04
VPS8Q8N3P4 IGHVIII-67-2-201ENST00000519849 88 ntBASIC-3.91□□□□□ -3.04
VPS8Q8N3P4 AC013791.1-201ENST00000616619 62 ntBASIC-3.91□□□□□ -3.04
VPS8Q8N3P4 RNU7-110P-201ENST00000516891 62 ntBASIC-3.92□□□□□ -3.04
VPS8Q8N3P4 RNU2-4P-201ENST00000606190 192 ntBASIC-3.92□□□□□ -3.04
VPS8Q8N3P4 U6.92-201ENST00000636464 89 ntBASIC-3.92□□□□□ -3.04
VPS8Q8N3P4 RNU5E-4P-201ENST00000364931 120 ntBASIC-3.93□□□□□ -3.04
VPS8Q8N3P4 RNU6-763P-201ENST00000390865 106 ntBASIC-3.93□□□□□ -3.04
VPS8Q8N3P4 RNU6-1156P-201ENST00000410365 100 ntBASIC-3.93□□□□□ -3.04
VPS8Q8N3P4 RNU7-2P-201ENST00000516096 62 ntBASIC-3.93□□□□□ -3.04
VPS8Q8N3P4 MIR4509-3-201ENST00000578671 94 ntBASIC-3.93□□□□□ -3.04
VPS8Q8N3P4 MIR4509-2-201ENST00000583920 94 ntBASIC-3.93□□□□□ -3.04
VPS8Q8N3P4 MIR4509-1-201ENST00000618224 94 ntBASIC-3.93□□□□□ -3.04
VPS8Q8N3P4 SNORD36A-201ENST00000362874 73 ntBASIC-3.94□□□□□ -3.04
VPS8Q8N3P4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.94□□□□□ -3.04
VPS8Q8N3P4 AC005520.4-201ENST00000604337 90 ntBASIC-3.94□□□□□ -3.04
VPS8Q8N3P4 MIR376B-201ENST00000614515 100 ntBASIC-3.94□□□□□ -3.04
VPS8Q8N3P4 Y_RNA.592-201ENST00000410274 109 ntBASIC-3.95□□□□□ -3.04
VPS8Q8N3P4 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.95□□□□□ -3.04
VPS8Q8N3P4 SNORD18C-201ENST00000362704 69 ntBASIC-3.95□□□□□ -3.04
VPS8Q8N3P4 Y_RNA.441-201ENST00000384123 112 ntBASIC-3.95□□□□□ -3.04
VPS8Q8N3P4 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.95□□□□□ -3.04
Retrieved 100 of 98,524 protein–RNA pairs in 210.8 ms